RNA–Protein interactions for RNA: ENST00000329399.6

PDLIM1-201, Transcript of PDZ and LIM domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM1, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-201ENST00000329399 POU3F4P49335 361 aa14.11□□□□□ -0.15
PDLIM1-201ENST00000329399 TBC1D28Q2M2D7 210 aa14.11□□□□□ -0.15
PDLIM1-201ENST00000329399 SNAI3Q3KNW1 292 aa14.11□□□□□ -0.15
PDLIM1-201ENST00000329399 CLVS2Q5SYC1 327 aa14.11□□□□□ -0.15
PDLIM1-201ENST00000329399 MZT2BQ6NZ67 158 aa14.11□□□□□ -0.15
PDLIM1-201ENST00000329399 PIAS4Q8N2W9 510 aaPredicted RBP14.11□□□□□ -0.15
PDLIM1-201ENST00000329399 DNAAF1Q8NEP3 725 aa14.11□□□□□ -0.15
PDLIM1-201ENST00000329399 CSNK2A3Q8NEV1 391 aa14.11□□□□□ -0.15
PDLIM1-201ENST00000329399 OR13C9Q8NGT0 318 aa14.11□□□□□ -0.15
PDLIM1-201ENST00000329399 FOXC2Q99958 501 aa14.11□□□□□ -0.15
PDLIM1-201ENST00000329399 SETD2Q9BYW2 2564 aaPredicted RBP14.11□□□□□ -0.15
PDLIM1-201ENST00000329399 PIGLQ9Y2B2 252 aa14.11□□□□□ -0.15
PDLIM1-201ENST00000329399 AMDHD2Q9Y303 409 aa14.11□□□□□ -0.15
PDLIM1-201ENST00000329399 LOC100509620A0A075B734 347 aa14.1□□□□□ -0.15
PDLIM1-201ENST00000329399 H3BSH0 61 aa14.1□□□□□ -0.15
PDLIM1-201ENST00000329399 CD8AP01732 235 aa14.1□□□□□ -0.15
PDLIM1-201ENST00000329399 DANCRP0C864 163 aa14.1□□□□□ -0.15
PDLIM1-201ENST00000329399 CBR1P16152 277 aa14.1□□□□□ -0.15
PDLIM1-201ENST00000329399 BAK1Q16611 211 aa14.1□□□□□ -0.15
PDLIM1-201ENST00000329399 GFOD2Q3B7J2 385 aa14.1□□□□□ -0.15
PDLIM1-201ENST00000329399 C3orf36Q3SXR2 165 aa14.1□□□□□ -0.15
PDLIM1-201ENST00000329399 TMEM42Q69YG0 159 aa14.1□□□□□ -0.15
PDLIM1-201ENST00000329399 OR5AS1Q8N127 324 aa14.1□□□□□ -0.15
PDLIM1-201ENST00000329399 ZNF611Q8N823 705 aa14.1□□□□□ -0.15
PDLIM1-201ENST00000329399 OR51D1Q8NGF3 324 aa14.1□□□□□ -0.15
PDLIM1-201ENST00000329399 PIGTQ969N2 578 aa14.1□□□□□ -0.15
PDLIM1-201ENST00000329399 RFT1Q96AA3 541 aa14.1□□□□□ -0.15
PDLIM1-201ENST00000329399 ITPKCQ96DU7 683 aa14.1□□□□□ -0.15
PDLIM1-201ENST00000329399 SLC25A38Q96DW6 304 aa14.1□□□□□ -0.15
PDLIM1-201ENST00000329399 C7orf50Q9BRJ6 194 aaKnown RBP14.1□□□□□ -0.15
PDLIM1-201ENST00000329399 REPIN1Q9BWE0 567 aaKnown RBP14.1□□□□□ -0.15
PDLIM1-201ENST00000329399 EIF3KQ9UBQ5 218 aaKnown RBP14.1□□□□□ -0.15
PDLIM1-201ENST00000329399 A0A0G2JMP0 313 aa14.09□□□□□ -0.15
PDLIM1-201ENST00000329399 A0A0X1KG70 313 aa14.09□□□□□ -0.15
PDLIM1-201ENST00000329399 ZNF816-ZNF321PA0A0X1KG74 233 aa14.09□□□□□ -0.15
PDLIM1-201ENST00000329399 hCG_38984A0A1B0GV85 526 aa14.09□□□□□ -0.15
PDLIM1-201ENST00000329399 C5orf49A4QMS7 147 aa14.09□□□□□ -0.15
PDLIM1-201ENST00000329399 GABARAPH6UMI1 98 aa14.09□□□□□ -0.15
PDLIM1-201ENST00000329399 LDLRAD4O15165 306 aa14.09□□□□□ -0.15
PDLIM1-201ENST00000329399 LMX1BO60663 402 aa14.09□□□□□ -0.15
PDLIM1-201ENST00000329399 HCKP08631 526 aa14.09□□□□□ -0.15
PDLIM1-201ENST00000329399 SSBP1Q04837 148 aaKnown RBP14.09□□□□□ -0.15
PDLIM1-201ENST00000329399 P2RY14Q15391 338 aa14.09□□□□□ -0.15
PDLIM1-201ENST00000329399 TMEM69Q5SWH9 247 aa14.09□□□□□ -0.15
PDLIM1-201ENST00000329399 TMEM108Q6UXF1 575 aa14.09□□□□□ -0.15
PDLIM1-201ENST00000329399 OR4M2Q8NGB6 313 aa14.09□□□□□ -0.15
PDLIM1-201ENST00000329399 OR51A2Q8NGJ7 313 aa14.09□□□□□ -0.15
PDLIM1-201ENST00000329399 POM121Q96HA1 1249 aa14.09□□□□□ -0.15
PDLIM1-201ENST00000329399 ZNF75AQ96N20 296 aa14.09□□□□□ -0.15
PDLIM1-201ENST00000329399 CCL19Q99731 98 aa14.09□□□□□ -0.15
PDLIM1-201ENST00000329399 THAP7Q9BT49 309 aaPredicted RBP14.09□□□□□ -0.15
PDLIM1-201ENST00000329399 SLC22A4Q9H015 551 aa14.09□□□□□ -0.15
PDLIM1-201ENST00000329399 PCDHB16Q9NRJ7 776 aa14.09□□□□□ -0.15
PDLIM1-201ENST00000329399 CISD1Q9NZ45 108 aaKnown RBP14.09□□□□□ -0.15
PDLIM1-201ENST00000329399 LAMP3Q9UQV4 416 aa14.09□□□□□ -0.15
PDLIM1-201ENST00000329399 A0A1W2PQ09 198 aa14.08□□□□□ -0.16
PDLIM1-201ENST00000329399 SULT1C2O00338 296 aa14.08□□□□□ -0.16
PDLIM1-201ENST00000329399 ECDO95905 644 aaPredicted RBP14.08□□□□□ -0.16
PDLIM1-201ENST00000329399 GSTT2BP0CG30 244 aa14.08□□□□□ -0.16
PDLIM1-201ENST00000329399 PTAFRP25105 342 aa14.08□□□□□ -0.16
PDLIM1-201ENST00000329399 AZGP1P25311 298 aaKnown RBP14.08□□□□□ -0.16
PDLIM1-201ENST00000329399 CALCRP30988 508 aa14.08□□□□□ -0.16
PDLIM1-201ENST00000329399 CLDN12P56749 244 aa14.08□□□□□ -0.16
PDLIM1-201ENST00000329399 AP3S2P59780 193 aa14.08□□□□□ -0.16
PDLIM1-201ENST00000329399 FAM3AP98173 230 aa14.08□□□□□ -0.16
PDLIM1-201ENST00000329399 HGFACQ04756 655 aa14.08□□□□□ -0.16
PDLIM1-201ENST00000329399 SLC22A25Q6T423 547 aa14.08□□□□□ -0.16
PDLIM1-201ENST00000329399 SPNS3Q6ZMD2 512 aa14.08□□□□□ -0.16
PDLIM1-201ENST00000329399 LHFPL2Q6ZUX7 228 aa14.08□□□□□ -0.16
PDLIM1-201ENST00000329399 MDP1Q86V88 176 aa14.08□□□□□ -0.16
PDLIM1-201ENST00000329399 SLC30A7Q8NEW0 376 aa14.08□□□□□ -0.16
PDLIM1-201ENST00000329399 WFDC11Q8NEX6 87 aa14.08□□□□□ -0.16
PDLIM1-201ENST00000329399 OR52N4Q8NGI2 321 aa14.08□□□□□ -0.16
PDLIM1-201ENST00000329399 KCNG3Q8TAE7 436 aa14.08□□□□□ -0.16
PDLIM1-201ENST00000329399 SMIM4Q8WVI0 70 aa14.08□□□□□ -0.16
PDLIM1-201ENST00000329399 CNTD2Q9H8S5 307 aa14.08□□□□□ -0.16
PDLIM1-201ENST00000329399 C14orf119Q9NWQ9 140 aa14.08□□□□□ -0.16
PDLIM1-201ENST00000329399 SLC7A11Q9UPY5 501 aa14.08□□□□□ -0.16
PDLIM1-201ENST00000329399 A0A0B4J203 849 aa14.07□□□□□ -0.16
PDLIM1-201ENST00000329399 CENPXA8MT69 81 aa14.07□□□□□ -0.16
PDLIM1-201ENST00000329399 ATP6V1G2-DDX39BF2Z307 99 aa14.07□□□□□ -0.16
PDLIM1-201ENST00000329399 IGLV1-44P01699 117 aa14.07□□□□□ -0.16
PDLIM1-201ENST00000329399 CHRM2P08172 466 aa14.07□□□□□ -0.16
PDLIM1-201ENST00000329399 CECR9P0C854 216 aa14.07□□□□□ -0.16
PDLIM1-201ENST00000329399 ZNF14P17017 642 aaPredicted RBP14.07□□□□□ -0.16
PDLIM1-201ENST00000329399 GPR176Q14439 515 aa14.07□□□□□ -0.16
PDLIM1-201ENST00000329399 C20orf204Q6ZNR8 217 aa14.07□□□□□ -0.16
PDLIM1-201ENST00000329399 FCAMRQ8WWV6 532 aa14.07□□□□□ -0.16
PDLIM1-201ENST00000329399 MS4A3Q96HJ5 214 aa14.07□□□□□ -0.16
PDLIM1-201ENST00000329399 ABHD1Q96SE0 405 aa14.07□□□□□ -0.16
PDLIM1-201ENST00000329399 CST11Q9H112 138 aa14.07□□□□□ -0.16
PDLIM1-201ENST00000329399 RHBDD3Q9Y3P4 386 aa14.07□□□□□ -0.16
PDLIM1-201ENST00000329399 TLN2Q9Y4G6 2542 aa14.07□□□□□ -0.16
PDLIM1-201ENST00000329399 CSPG4Q6UVK1 2322 aa14.07□□□□□ -0.16
PDLIM1-201ENST00000329399 NIPBLQ6KC79 2804 aaeCLIP14.07□□□□□ -0.16
PDLIM1-201ENST00000329399 TMEM272A0A1B0GTI8 110 aa14.06□□□□□ -0.16
PDLIM1-201ENST00000329399 GGT3PA6NGU5 568 aa14.06□□□□□ -0.16
PDLIM1-201ENST00000329399 NRASP01111 189 aa14.06□□□□□ -0.16
PDLIM1-201ENST00000329399 IGKV3-15P01624 115 aa14.06□□□□□ -0.16
PDLIM1-201ENST00000329399 FAHP16930 419 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms