RNA–Protein interactions for RNA: ENST00000324288.12

CIITA-201, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIITA, Length 11,952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-201ENST00000324288 HTN1P15515 57 aa7.13□□□□□ -1.27
CIITA-201ENST00000324288 ADAMTSL4Q6UY14 1074 aa7.13□□□□□ -1.27
CIITA-201ENST00000324288 ANKLE1Q8NAG6 615 aa7.13□□□□□ -1.27
CIITA-201ENST00000324288 OR10P1Q8NGE3 313 aa7.13□□□□□ -1.27
CIITA-201ENST00000324288 ZMIZ1Q9ULJ6 1067 aa7.13□□□□□ -1.27
CIITA-201ENST00000324288 CLDN10P78369 228 aa7.13□□□□□ -1.27
CIITA-201ENST00000324288 CLLU1Q5K131 121 aa7.13□□□□□ -1.27
CIITA-201ENST00000324288 CSF3RQ99062 836 aa7.13□□□□□ -1.27
CIITA-201ENST00000324288 TMEM140Q9NV12 185 aa7.13□□□□□ -1.27
CIITA-201ENST00000324288 OR4C46A6NHA9 309 aa7.13□□□□□ -1.27
CIITA-201ENST00000324288 SLC35E2P0CK97 266 aa7.13□□□□□ -1.27
CIITA-201ENST00000324288 CD200P41217 278 aa7.13□□□□□ -1.27
CIITA-201ENST00000324288 INSL4Q14641 139 aa7.13□□□□□ -1.27
CIITA-201ENST00000324288 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.13□□□□□ -1.27
CIITA-201ENST00000324288 WDR88Q6ZMY6 472 aa7.13□□□□□ -1.27
CIITA-201ENST00000324288 DOK3Q7L591 496 aa7.13□□□□□ -1.27
CIITA-201ENST00000324288 SLC37A2Q8TED4 501 aa7.13□□□□□ -1.27
CIITA-201ENST00000324288 FLYWCH2Q96CP2 140 aaKnown RBP7.13□□□□□ -1.27
CIITA-201ENST00000324288 MS4A4AQ96JQ5 239 aa7.13□□□□□ -1.27
CIITA-201ENST00000324288 MENTQ9BUN1 341 aa7.13□□□□□ -1.27
CIITA-201ENST00000324288 TBC1D29Q9UFV1 150 aa7.13□□□□□ -1.27
CIITA-201ENST00000324288 NCOA6Q14686 2063 aaPredicted RBP7.13□□□□□ -1.27
CIITA-201ENST00000324288 HTR1DP28221 377 aa7.13□□□□□ -1.27
CIITA-201ENST00000324288 BPIFB3P59826 476 aa7.13□□□□□ -1.27
CIITA-201ENST00000324288 SPNS3Q6ZMD2 512 aa7.13□□□□□ -1.27
CIITA-201ENST00000324288 WFDC5Q8TCV5 224 aa7.13□□□□□ -1.27
CIITA-201ENST00000324288 CMTM3Q96MX0 182 aa7.13□□□□□ -1.27
CIITA-201ENST00000324288 PBOV1Q9GZY1 135 aa7.13□□□□□ -1.27
CIITA-201ENST00000324288 TNFRSF12AQ9NP84 129 aa7.13□□□□□ -1.27
CIITA-201ENST00000324288 FKBP11Q9NYL4 201 aa7.13□□□□□ -1.27
CIITA-201ENST00000324288 TMEM272A0A1B0GTI8 110 aa7.12□□□□□ -1.27
CIITA-201ENST00000324288 H7C2G1 150 aa7.12□□□□□ -1.27
CIITA-201ENST00000324288 M0R1X1 148 aa7.12□□□□□ -1.27
CIITA-201ENST00000324288 DUS4LO95620 317 aaKnown RBP7.12□□□□□ -1.27
CIITA-201ENST00000324288 EPXP11678 715 aa7.12□□□□□ -1.27
CIITA-201ENST00000324288 COX5AP20674 150 aa7.12□□□□□ -1.27
CIITA-201ENST00000324288 KCNJ3P48549 501 aa7.12□□□□□ -1.27
CIITA-201ENST00000324288 LIMK1P53667 647 aa7.12□□□□□ -1.27
CIITA-201ENST00000324288 IL10RAQ13651 578 aa7.12□□□□□ -1.27
CIITA-201ENST00000324288 Q5PR19 223 aa7.12□□□□□ -1.27
CIITA-201ENST00000324288 C11orf87Q6NUJ2 197 aa7.12□□□□□ -1.27
CIITA-201ENST00000324288 PARM1Q6UWI2 310 aa7.12□□□□□ -1.27
CIITA-201ENST00000324288 MUC20Q8N307 709 aaPredicted RBP7.12□□□□□ -1.27
CIITA-201ENST00000324288 TEAD3Q99594 435 aa7.12□□□□□ -1.27
CIITA-201ENST00000324288 COMMD5Q9GZQ3 224 aa7.12□□□□□ -1.27
CIITA-201ENST00000324288 PROCRQ9UNN8 238 aa7.12□□□□□ -1.27
CIITA-201ENST00000324288 PCDHGA9Q9Y5G4 932 aaKnown RBP7.12□□□□□ -1.27
CIITA-201ENST00000324288 SPRY3O43610 288 aa7.12□□□□□ -1.27
CIITA-201ENST00000324288 CSNK1G2P78368 415 aa7.12□□□□□ -1.27
CIITA-201ENST00000324288 SLC25A26Q70HW3 274 aa7.12□□□□□ -1.27
CIITA-201ENST00000324288 MUC15Q8N387 334 aa7.12□□□□□ -1.27
CIITA-201ENST00000324288 SLC25A37Q9NYZ2 338 aa7.12□□□□□ -1.27
CIITA-201ENST00000324288 M0R2Z0 102 aa7.12□□□□□ -1.27
CIITA-201ENST00000324288 PJVKQ0ZLH3 352 aa7.12□□□□□ -1.27
CIITA-201ENST00000324288 SLC48A1Q6P1K1 146 aa7.12□□□□□ -1.27
CIITA-201ENST00000324288 TAAR6Q96RI8 345 aa7.12□□□□□ -1.27
CIITA-201ENST00000324288 HYAL3O43820 417 aaPredicted RBP7.12□□□□□ -1.27
CIITA-201ENST00000324288 S100A4P26447 101 aaKnown RBP7.12□□□□□ -1.27
CIITA-201ENST00000324288 FAM3AP98173 230 aa7.12□□□□□ -1.27
CIITA-201ENST00000324288 Q56UQ5 140 aa7.12□□□□□ -1.27
CIITA-201ENST00000324288 PRSS3P2Q8NHM4 247 aa7.12□□□□□ -1.27
CIITA-201ENST00000324288 CORO2AQ92828 525 aa7.12□□□□□ -1.27
CIITA-201ENST00000324288 SYT11Q9BT88 431 aa7.12□□□□□ -1.27
CIITA-201ENST00000324288 SLC35B3Q9H1N7 401 aa7.12□□□□□ -1.27
CIITA-201ENST00000324288 MBNL1Q9NR56 388 aaKnown RBP7.12□□□□□ -1.27
CIITA-201ENST00000324288 DLL4Q9NR61 685 aa7.12□□□□□ -1.27
CIITA-201ENST00000324288 MBLAC1A4D2B0 266 aaPredicted RBP7.12□□□□□ -1.27
CIITA-201ENST00000324288 LRRC3CA6NJW4 275 aa7.12□□□□□ -1.27
CIITA-201ENST00000324288 KCNAB3O43448 404 aa7.12□□□□□ -1.27
CIITA-201ENST00000324288 IGHEP01854 428 aa7.12□□□□□ -1.27
CIITA-201ENST00000324288 MRPS21P82921 87 aaKnown RBP7.12□□□□□ -1.27
CIITA-201ENST00000324288 AWAT1Q58HT5 328 aa7.12□□□□□ -1.27
CIITA-201ENST00000324288 HSD17B13Q7Z5P4 300 aaPredicted RBP7.12□□□□□ -1.27
CIITA-201ENST00000324288 CAMKMTQ7Z624 323 aa7.12□□□□□ -1.27
CIITA-201ENST00000324288 NPEPL1Q8NDH3 523 aa7.12□□□□□ -1.27
CIITA-201ENST00000324288 HDAC8Q9BY41 377 aa7.12□□□□□ -1.27
CIITA-201ENST00000324288 PLPP1O14494 284 aa7.12□□□□□ -1.27
CIITA-201ENST00000324288 ECI1P42126 302 aa7.12□□□□□ -1.27
CIITA-201ENST00000324288 HAAOP46952 286 aa7.12□□□□□ -1.27
CIITA-201ENST00000324288 TMEM241Q24JQ0 296 aa7.12□□□□□ -1.27
CIITA-201ENST00000324288 MRPL54Q6P161 138 aaKnown RBP7.12□□□□□ -1.27
CIITA-201ENST00000324288 AMDHD2Q9Y303 409 aa7.12□□□□□ -1.27
CIITA-201ENST00000324288 GRINAQ7Z429 371 aa7.12□□□□□ -1.27
CIITA-201ENST00000324288 GPR87Q9BY21 358 aa7.12□□□□□ -1.27
CIITA-201ENST00000324288 A4GNTQ9UNA3 340 aa7.12□□□□□ -1.27
CIITA-201ENST00000324288 KDM3BQ7LBC6 1761 aa7.12□□□□□ -1.27
CIITA-201ENST00000324288 MAP1LC3B2A6NCE7 125 aa7.12□□□□□ -1.27
CIITA-201ENST00000324288 ZNF121P58317 390 aaPredicted RBP7.12□□□□□ -1.27
CIITA-201ENST00000324288 CLPPQ16740 277 aaPredicted RBP7.12□□□□□ -1.27
CIITA-201ENST00000324288 SLC35D3Q5M8T2 416 aa7.12□□□□□ -1.27
CIITA-201ENST00000324288 PRSS42Q7Z5A4 293 aa7.12□□□□□ -1.27
CIITA-201ENST00000324288 MRGPREQ86SM8 312 aa7.12□□□□□ -1.27
CIITA-201ENST00000324288 FBXL14Q8N1E6 418 aa7.12□□□□□ -1.27
CIITA-201ENST00000324288 OR52N4Q8NGI2 321 aa7.12□□□□□ -1.27
CIITA-201ENST00000324288 MAP1LC3BQ9GZQ8 125 aa7.12□□□□□ -1.27
CIITA-201ENST00000324288 FBXL17Q9UF56 701 aa7.12□□□□□ -1.27
CIITA-201ENST00000324288 ZNF346Q9UL40 294 aaKnown RBP7.12□□□□□ -1.27
CIITA-201ENST00000324288 ANK1P16157 1881 aa7.12□□□□□ -1.27
CIITA-201ENST00000324288 ZAR1LA6NP61 321 aa7.12□□□□□ -1.27
CIITA-201ENST00000324288 OTX1P32242 354 aaPredicted RBP7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms