RNA–Protein interactions for RNA: ENST00000317516.11

TPM1-203, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-203ENST00000317516 PLCXD3Q63HM9 321 aa14.63□□□□□ -0.07
TPM1-203ENST00000317516 C12orf73Q69YU5 71 aa14.63□□□□□ -0.07
TPM1-203ENST00000317516 METAP1DQ6UB28 335 aaPredicted RBP14.63□□□□□ -0.07
TPM1-203ENST00000317516 C1orf122Q6ZSJ8 110 aa14.63□□□□□ -0.07
TPM1-203ENST00000317516 FGFRL1Q8N441 504 aa14.63□□□□□ -0.07
TPM1-203ENST00000317516 C8orf46Q8TAG6 207 aa14.63□□□□□ -0.07
TPM1-203ENST00000317516 DUS3LQ96G46 650 aaKnown RBP14.63□□□□□ -0.07
TPM1-203ENST00000317516 FGF23Q9GZV9 251 aaPredicted RBP14.63□□□□□ -0.07
TPM1-203ENST00000317516 DPAGT1Q9H3H5 408 aa14.63□□□□□ -0.07
TPM1-203ENST00000317516 ZNF696Q9H7X3 374 aa14.63□□□□□ -0.07
TPM1-203ENST00000317516 CLN6Q9NWW5 311 aa14.63□□□□□ -0.07
TPM1-203ENST00000317516 RHBDL1O75783 438 aa14.62□□□□□ -0.07
TPM1-203ENST00000317516 IGLV3-1P01715 115 aa14.62□□□□□ -0.07
TPM1-203ENST00000317516 NDUFB7P17568 137 aa14.62□□□□□ -0.07
TPM1-203ENST00000317516 CAV3P56539 151 aa14.62□□□□□ -0.07
TPM1-203ENST00000317516 PRR31Q5SQ13 230 aa14.62□□□□□ -0.07
TPM1-203ENST00000317516 BCL2L15Q5TBC7 163 aa14.62□□□□□ -0.07
TPM1-203ENST00000317516 HAGHLQ6PII5 290 aaPredicted RBP14.62□□□□□ -0.07
TPM1-203ENST00000317516 BCDIN3DQ7Z5W3 292 aaKnown RBP14.62□□□□□ -0.07
TPM1-203ENST00000317516 AMIGO2Q86SJ2 522 aa14.62□□□□□ -0.07
TPM1-203ENST00000317516 PDZD9Q8IXQ8 264 aa14.62□□□□□ -0.07
TPM1-203ENST00000317516 AQP3Q92482 292 aa14.62□□□□□ -0.07
TPM1-203ENST00000317516 DYRK2Q92630 601 aa14.62□□□□□ -0.07
TPM1-203ENST00000317516 GAFA1Q96PS6 74 aa14.62□□□□□ -0.07
TPM1-203ENST00000317516 IL4I1Q96RQ9 567 aa14.62□□□□□ -0.07
TPM1-203ENST00000317516 APOL4Q9BPW4 351 aa14.62□□□□□ -0.07
TPM1-203ENST00000317516 TTTY10Q9BZA0 68 aa14.62□□□□□ -0.07
TPM1-203ENST00000317516 CHIAQ9BZP6 476 aa14.62□□□□□ -0.07
TPM1-203ENST00000317516 GABARAPL1Q9H0R8 117 aa14.62□□□□□ -0.07
TPM1-203ENST00000317516 ADGRL4Q9HBW9 690 aa14.62□□□□□ -0.07
TPM1-203ENST00000317516 WARS2Q9UGM6 360 aaKnown RBP14.62□□□□□ -0.07
TPM1-203ENST00000317516 SNX5Q9Y5X3 404 aa14.62□□□□□ -0.07
TPM1-203ENST00000317516 R4GMQ9 66 aa14.62□□□□□ -0.07
TPM1-203ENST00000317516 A0A0U1RQK1 487 aa14.61□□□□□ -0.07
TPM1-203ENST00000317516 A0A1W2PQ09 198 aa14.61□□□□□ -0.07
TPM1-203ENST00000317516 PRR32B1ATL7 298 aa14.61□□□□□ -0.07
TPM1-203ENST00000317516 CIB2O75838 187 aa14.61□□□□□ -0.07
TPM1-203ENST00000317516 KNG1P01042 644 aa14.61□□□□□ -0.07
TPM1-203ENST00000317516 TTRP02766 147 aa14.61□□□□□ -0.07
TPM1-203ENST00000317516 FAHP16930 419 aa14.61□□□□□ -0.07
TPM1-203ENST00000317516 MDKP21741 143 aaPredicted RBP14.61□□□□□ -0.07
TPM1-203ENST00000317516 OMGP23515 440 aa14.61□□□□□ -0.07
TPM1-203ENST00000317516 EPHA2P29317 976 aa14.61□□□□□ -0.07
TPM1-203ENST00000317516 RAG2P55895 527 aa14.61□□□□□ -0.07
TPM1-203ENST00000317516 DGUOKQ16854 277 aa14.61□□□□□ -0.07
TPM1-203ENST00000317516 CLVS2Q5SYC1 327 aa14.61□□□□□ -0.07
TPM1-203ENST00000317516 ZNF573Q86YE8 665 aa14.61□□□□□ -0.07
TPM1-203ENST00000317516 ELMOD2Q8IZ81 293 aa14.61□□□□□ -0.07
TPM1-203ENST00000317516 LRTOMTQ8WZ04 291 aa14.61□□□□□ -0.07
TPM1-203ENST00000317516 PPP1R14AQ96A00 147 aa14.61□□□□□ -0.07
TPM1-203ENST00000317516 OR52A1Q9UKL2 312 aa14.61□□□□□ -0.07
TPM1-203ENST00000317516 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.61□□□□□ -0.07
TPM1-203ENST00000317516 BTBD17A6NE02 478 aa14.6□□□□□ -0.07
TPM1-203ENST00000317516 M0R1W7 72 aa14.6□□□□□ -0.07
TPM1-203ENST00000317516 DLGAP1O14490 977 aa14.6□□□□□ -0.07
TPM1-203ENST00000317516 NDUFA7O95182 113 aa14.6□□□□□ -0.07
TPM1-203ENST00000317516 KRT8P05787 483 aa14.6□□□□□ -0.07
TPM1-203ENST00000317516 FBP1P09467 338 aa14.6□□□□□ -0.07
TPM1-203ENST00000317516 PSG2P11465 335 aa14.6□□□□□ -0.07
TPM1-203ENST00000317516 SELLP14151 372 aa14.6□□□□□ -0.07
TPM1-203ENST00000317516 ATP6V1E1P36543 226 aa14.6□□□□□ -0.07
TPM1-203ENST00000317516 IER3P46695 156 aa14.6□□□□□ -0.07
TPM1-203ENST00000317516 MFGE8Q08431 387 aaPredicted RBP14.6□□□□□ -0.07
TPM1-203ENST00000317516 NCR3LG1Q68D85 454 aa14.6□□□□□ -0.07
TPM1-203ENST00000317516 LDLRAD3Q86YD5 345 aa14.6□□□□□ -0.07
TPM1-203ENST00000317516 PIP4P2Q8N4L2 257 aa14.6□□□□□ -0.07
TPM1-203ENST00000317516 OR51G2Q8NGK0 314 aa14.6□□□□□ -0.07
TPM1-203ENST00000317516 CENPNQ96H22 339 aaPredicted RBP14.6□□□□□ -0.07
TPM1-203ENST00000317516 CIB1Q99828 191 aa14.6□□□□□ -0.07
TPM1-203ENST00000317516 OSBPL10Q9BXB5 764 aa14.6□□□□□ -0.07
TPM1-203ENST00000317516 METTL8Q9H825 291 aaKnown RBP14.6□□□□□ -0.07
TPM1-203ENST00000317516 SIRT7Q9NRC8 400 aa14.6□□□□□ -0.07
TPM1-203ENST00000317516 C1RLQ9NZP8 487 aa14.6□□□□□ -0.07
TPM1-203ENST00000317516 POLDIP2Q9Y2S7 368 aa14.6□□□□□ -0.07
TPM1-203ENST00000317516 TRBV23-1A0A0A0MS06 115 aa14.59□□□□□ -0.07
TPM1-203ENST00000317516 DHRS7CA6NNS2 312 aa14.59□□□□□ -0.07
TPM1-203ENST00000317516 M0R129 80 aa14.59□□□□□ -0.07
TPM1-203ENST00000317516 SRSF10O75494 262 aaKnown RBP14.59□□□□□ -0.07
TPM1-203ENST00000317516 OR2T7P0C7T2 308 aa14.59□□□□□ -0.07
TPM1-203ENST00000317516 HAAOP46952 286 aa14.59□□□□□ -0.07
TPM1-203ENST00000317516 SMIM21Q3B7S5 101 aa14.59□□□□□ -0.07
TPM1-203ENST00000317516 DMRTC1Q5HYR2 192 aa14.59□□□□□ -0.07
TPM1-203ENST00000317516 C17orf107Q6ZR85 190 aa14.59□□□□□ -0.07
TPM1-203ENST00000317516 YIPF7Q8N8F6 280 aa14.59□□□□□ -0.07
TPM1-203ENST00000317516 ZNRF1Q8ND25 227 aa14.59□□□□□ -0.07
TPM1-203ENST00000317516 TMEM185AQ8NFB2 350 aa14.59□□□□□ -0.07
TPM1-203ENST00000317516 OR2T27Q8NH04 317 aa14.59□□□□□ -0.07
TPM1-203ENST00000317516 TAF15Q92804 592 aaKnown RBP eCLIP14.59□□□□□ -0.07
TPM1-203ENST00000317516 SDSLQ96GA7 329 aa14.59□□□□□ -0.07
TPM1-203ENST00000317516 MRM2Q9UI43 246 aaKnown RBP14.59□□□□□ -0.07
TPM1-203ENST00000317516 V9GYS6 101 aa14.59□□□□□ -0.07
TPM1-203ENST00000317516 IGKV1D-17A0A075B6S4 117 aa14.58□□□□□ -0.08
TPM1-203ENST00000317516 A0A1W2PPH5 198 aa14.58□□□□□ -0.08
TPM1-203ENST00000317516 J3QT63 122 aa14.58□□□□□ -0.08
TPM1-203ENST00000317516 NPFFO15130 113 aa14.58□□□□□ -0.08
TPM1-203ENST00000317516 MAGEB4O15481 346 aaPredicted RBP14.58□□□□□ -0.08
TPM1-203ENST00000317516 PAHP00439 452 aa14.58□□□□□ -0.08
TPM1-203ENST00000317516 IGHV4-59P01825 116 aa14.58□□□□□ -0.08
TPM1-203ENST00000317516 HTR1FP30939 366 aa14.58□□□□□ -0.08
TPM1-203ENST00000317516 CAPZA1P52907 286 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms