RNA–Protein interactions for RNA: ENST00000317201.6

HOXA3-201, Transcript of homeobox A3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HOXA3, Length 2,761 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-201ENST00000317201 MFNGO00587 321 aa12.98□□□□□ -0.33
HOXA3-201ENST00000317201 TNFSF15O95150 251 aa12.98□□□□□ -0.33
HOXA3-201ENST00000317201 THBS4P35443 961 aa12.98□□□□□ -0.33
HOXA3-201ENST00000317201 SOX8P57073 446 aa12.98□□□□□ -0.33
HOXA3-201ENST00000317201 CTXN1P60606 82 aa12.98□□□□□ -0.33
HOXA3-201ENST00000317201 ZP4Q12836 540 aa12.98□□□□□ -0.33
HOXA3-201ENST00000317201 TMPRSS12Q86WS5 348 aa12.98□□□□□ -0.33
HOXA3-201ENST00000317201 ANGPTL5Q86XS5 388 aa12.98□□□□□ -0.33
HOXA3-201ENST00000317201 ZNF433Q8N7K0 673 aaPredicted RBP12.98□□□□□ -0.33
HOXA3-201ENST00000317201 OR4K13Q8NH42 304 aa12.98□□□□□ -0.33
HOXA3-201ENST00000317201 ZBTB8AQ96BR9 441 aa12.98□□□□□ -0.33
HOXA3-201ENST00000317201 ADGRL4Q9HBW9 690 aa12.98□□□□□ -0.33
HOXA3-201ENST00000317201 P4HTMQ9NXG6 502 aa12.98□□□□□ -0.33
HOXA3-201ENST00000317201 LPAR3Q9UBY5 353 aa12.98□□□□□ -0.33
HOXA3-201ENST00000317201 A6NJY4 79 aa12.98□□□□□ -0.33
HOXA3-201ENST00000317201 OR8U9P0C7N5 309 aa12.98□□□□□ -0.33
HOXA3-201ENST00000317201 TMEM69Q5SWH9 247 aa12.98□□□□□ -0.33
HOXA3-201ENST00000317201 HIST2H3PS2Q5TEC6 136 aa12.98□□□□□ -0.33
HOXA3-201ENST00000317201 OR8U1Q8NH10 309 aa12.98□□□□□ -0.33
HOXA3-201ENST00000317201 OR5R1Q8NH85 324 aa12.98□□□□□ -0.33
HOXA3-201ENST00000317201 ALKBH3Q96Q83 286 aaPredicted RBP12.98□□□□□ -0.33
HOXA3-201ENST00000317201 SERINC1Q9NRX5 453 aa12.98□□□□□ -0.33
HOXA3-201ENST00000317201 C2orf72A6NCS6 295 aa12.98□□□□□ -0.33
HOXA3-201ENST00000317201 NPIPB13A6NJU9 1138 aa12.98□□□□□ -0.33
HOXA3-201ENST00000317201 NPIPB4C9JG80 1138 aa12.98□□□□□ -0.33
HOXA3-201ENST00000317201 ITGB1BP1O14713 200 aa12.98□□□□□ -0.33
HOXA3-201ENST00000317201 CD5P06127 495 aa12.98□□□□□ -0.33
HOXA3-201ENST00000317201 OR4A8P0C604 315 aa12.98□□□□□ -0.33
HOXA3-201ENST00000317201 PGA3P0DJD8 388 aa12.98□□□□□ -0.33
HOXA3-201ENST00000317201 GAAP10253 952 aa12.98□□□□□ -0.33
HOXA3-201ENST00000317201 Q0VFX4 171 aa12.98□□□□□ -0.33
HOXA3-201ENST00000317201 FOXF1Q12946 379 aa12.98□□□□□ -0.33
HOXA3-201ENST00000317201 ZNF345Q14585 488 aa12.98□□□□□ -0.33
HOXA3-201ENST00000317201 ZNF774Q6NX45 483 aa12.98□□□□□ -0.33
HOXA3-201ENST00000317201 TMEM156Q8N614 296 aa12.98□□□□□ -0.33
HOXA3-201ENST00000317201 OR51V1Q9H2C8 321 aa12.98□□□□□ -0.33
HOXA3-201ENST00000317201 SDK2Q58EX2 2172 aa12.97□□□□□ -0.33
HOXA3-201ENST00000317201 WISP1O95388 367 aa12.97□□□□□ -0.33
HOXA3-201ENST00000317201 CXCL1P09341 107 aa12.97□□□□□ -0.33
HOXA3-201ENST00000317201 FTH1P19P0C7X4 201 aa12.97□□□□□ -0.33
HOXA3-201ENST00000317201 CSRP1P21291 193 aaKnown RBP12.97□□□□□ -0.33
HOXA3-201ENST00000317201 RPS23P62266 143 aaKnown RBP12.97□□□□□ -0.33
HOXA3-201ENST00000317201 C1QL3Q5VWW1 255 aa12.97□□□□□ -0.33
HOXA3-201ENST00000317201 FBXW9Q5XUX1 488 aa12.97□□□□□ -0.33
HOXA3-201ENST00000317201 OLFML2AQ68BL7 652 aa12.97□□□□□ -0.33
HOXA3-201ENST00000317201 RTL6Q6ICC9 239 aa12.97□□□□□ -0.33
HOXA3-201ENST00000317201 ZNF705AQ6ZN79 300 aaPredicted RBP12.97□□□□□ -0.33
HOXA3-201ENST00000317201 C1QL4Q86Z23 238 aa12.97□□□□□ -0.33
HOXA3-201ENST00000317201 TMEM99Q8N816 258 aa12.97□□□□□ -0.33
HOXA3-201ENST00000317201 EXD3Q8N9H8 876 aa12.97□□□□□ -0.33
HOXA3-201ENST00000317201 CYB561A3Q8NBI2 242 aa12.97□□□□□ -0.33
HOXA3-201ENST00000317201 DEFB124Q8NES8 71 aa12.97□□□□□ -0.33
HOXA3-201ENST00000317201 ADAMTS17Q8TE56 1095 aa12.97□□□□□ -0.33
HOXA3-201ENST00000317201 DNAJA3Q96EY1 480 aa12.97□□□□□ -0.33
HOXA3-201ENST00000317201 GALNT14Q96FL9 552 aa12.97□□□□□ -0.33
HOXA3-201ENST00000317201 GAL3ST2Q9H3Q3 398 aa12.97□□□□□ -0.33
HOXA3-201ENST00000317201 RNF24Q9Y225 148 aa12.97□□□□□ -0.33
HOXA3-201ENST00000317201 KPTNQ9Y664 436 aa12.97□□□□□ -0.33
HOXA3-201ENST00000317201 CHD3Q12873 2000 aaKnown RBP12.97□□□□□ -0.33
HOXA3-201ENST00000317201 ZNF724A8MTY0 619 aa12.97□□□□□ -0.33
HOXA3-201ENST00000317201 EEF1E1-BLOC1S5C9J1V9 151 aa12.97□□□□□ -0.33
HOXA3-201ENST00000317201 CTDSPLO15194 276 aa12.97□□□□□ -0.33
HOXA3-201ENST00000317201 PTBP3O95758 552 aaKnown RBP12.97□□□□□ -0.33
HOXA3-201ENST00000317201 MRPL3P09001 348 aaKnown RBP12.97□□□□□ -0.33
HOXA3-201ENST00000317201 IGF2-ASQ6U949 168 aa12.97□□□□□ -0.33
HOXA3-201ENST00000317201 OR10H4Q8NGA5 316 aa12.97□□□□□ -0.33
HOXA3-201ENST00000317201 OR4K17Q8NGC6 315 aa12.97□□□□□ -0.33
HOXA3-201ENST00000317201 TSPAN32Q96QS1 320 aa12.97□□□□□ -0.33
HOXA3-201ENST00000317201 NMNAT3Q96T66 252 aa12.97□□□□□ -0.33
HOXA3-201ENST00000317201 SLC25A18Q9H1K4 315 aa12.97□□□□□ -0.33
HOXA3-201ENST00000317201 LPAR2Q9HBW0 351 aa12.97□□□□□ -0.33
HOXA3-201ENST00000317201 PUS1Q9Y606 427 aaKnown RBP eCLIP12.97□□□□□ -0.33
HOXA3-201ENST00000317201 A0A1B0GV50 99 aa12.96□□□□□ -0.33
HOXA3-201ENST00000317201 FAM157AC9JC47 383 aa12.96□□□□□ -0.33
HOXA3-201ENST00000317201 J3QLW9 94 aa12.96□□□□□ -0.33
HOXA3-201ENST00000317201 PLPP3O14495 311 aa12.96□□□□□ -0.33
HOXA3-201ENST00000317201 SCGNO76038 276 aa12.96□□□□□ -0.33
HOXA3-201ENST00000317201 ERCC1P07992 297 aaPredicted RBP12.96□□□□□ -0.33
HOXA3-201ENST00000317201 ZNF19P17023 458 aa12.96□□□□□ -0.33
HOXA3-201ENST00000317201 GRPRP30550 384 aa12.96□□□□□ -0.33
HOXA3-201ENST00000317201 UBE2V2Q15819 145 aa12.96□□□□□ -0.33
HOXA3-201ENST00000317201 GXYLT1Q4G148 440 aa12.96□□□□□ -0.33
HOXA3-201ENST00000317201 NKAIN3Q8N8D7 197 aa12.96□□□□□ -0.33
HOXA3-201ENST00000317201 ADPRHL1Q8NDY3 354 aa12.96□□□□□ -0.33
HOXA3-201ENST00000317201 RASD2Q96D21 266 aa12.96□□□□□ -0.33
HOXA3-201ENST00000317201 Q96M85 177 aa12.96□□□□□ -0.33
HOXA3-201ENST00000317201 URM1Q9BTM9 101 aaKnown RBP12.96□□□□□ -0.33
HOXA3-201ENST00000317201 NOP16Q9Y3C1 178 aaKnown RBP12.96□□□□□ -0.33
HOXA3-201ENST00000317201 WDR87Q6ZQQ6 2873 aa12.96□□□□□ -0.33
HOXA3-201ENST00000317201 TMEM127O75204 238 aa12.96□□□□□ -0.34
HOXA3-201ENST00000317201 SCAF4O95104 1147 aaKnown RBP12.96□□□□□ -0.34
HOXA3-201ENST00000317201 OR2T7P0C7T2 308 aa12.96□□□□□ -0.34
HOXA3-201ENST00000317201 METTL15P1P0C7V9 234 aa12.96□□□□□ -0.34
HOXA3-201ENST00000317201 CDKN2AP42771 156 aaKnown RBP12.96□□□□□ -0.34
HOXA3-201ENST00000317201 UBE2NLQ5JXB2 153 aa12.96□□□□□ -0.34
HOXA3-201ENST00000317201 LEG1Q6P5S2 330 aa12.96□□□□□ -0.34
HOXA3-201ENST00000317201 OR2T27Q8NH04 317 aa12.96□□□□□ -0.34
HOXA3-201ENST00000317201 CNN2Q99439 309 aaKnown RBP12.96□□□□□ -0.34
HOXA3-201ENST00000317201 UTP23Q9BRU9 249 aaKnown RBP12.96□□□□□ -0.34
HOXA3-201ENST00000317201 TXNIPQ9H3M7 391 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms