RNA–Protein interactions for RNA: ENST00000311943.11

SCFD1-201, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 2,016 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-201ENST00000311943 ADAM20O43506 726 aa10.02□□□□□ -0.81
SCFD1-201ENST00000311943 IKZF1Q13422 519 aa10.02□□□□□ -0.81
SCFD1-201ENST00000311943 TMEM155Q4W5P6 130 aa10.02□□□□□ -0.81
SCFD1-201ENST00000311943 METAP1DQ6UB28 335 aaPredicted RBP10.02□□□□□ -0.81
SCFD1-201ENST00000311943 Q6ZSR3 168 aa10.02□□□□□ -0.81
SCFD1-201ENST00000311943 ZNF485Q8NCK3 441 aa10.02□□□□□ -0.81
SCFD1-201ENST00000311943 OR5D18Q8NGL1 313 aa10.02□□□□□ -0.81
SCFD1-201ENST00000311943 OR11L1Q8NGX0 322 aa10.02□□□□□ -0.81
SCFD1-201ENST00000311943 AQP3Q92482 292 aa10.02□□□□□ -0.81
SCFD1-201ENST00000311943 CYYR1Q96J86 154 aa10.02□□□□□ -0.81
SCFD1-201ENST00000311943 SHARPINQ9H0F6 387 aa10.02□□□□□ -0.81
SCFD1-201ENST00000311943 MOB1AQ9H8S9 216 aa10.02□□□□□ -0.81
SCFD1-201ENST00000311943 PSORS1C1Q9UIG5 152 aa10.02□□□□□ -0.81
SCFD1-201ENST00000311943 DNHD1Q96M86 4753 aa10.02□□□□□ -0.81
SCFD1-201ENST00000311943 DOCK11Q5JSL3 2073 aa10.02□□□□□ -0.81
SCFD1-201ENST00000311943 A0A1W2PPK0 400 aa10.01□□□□□ -0.81
SCFD1-201ENST00000311943 PQLC2LA1A4F0 135 aa10.01□□□□□ -0.81
SCFD1-201ENST00000311943 LRRC30A6NM36 301 aa10.01□□□□□ -0.81
SCFD1-201ENST00000311943 LGALS8O00214 317 aa10.01□□□□□ -0.81
SCFD1-201ENST00000311943 TMPRSS2O15393 492 aa10.01□□□□□ -0.81
SCFD1-201ENST00000311943 DVL1P1P54792 670 aaPredicted RBP10.01□□□□□ -0.81
SCFD1-201ENST00000311943 PAX2Q02962 417 aa10.01□□□□□ -0.81
SCFD1-201ENST00000311943 CHRFAM7AQ494W8 412 aa10.01□□□□□ -0.81
SCFD1-201ENST00000311943 CLVS2Q5SYC1 327 aa10.01□□□□□ -0.81
SCFD1-201ENST00000311943 GLCCI1Q86VQ1 547 aa10.01□□□□□ -0.81
SCFD1-201ENST00000311943 ZNF676Q8N7Q3 588 aa10.01□□□□□ -0.81
SCFD1-201ENST00000311943 OR51A2Q8NGJ7 313 aa10.01□□□□□ -0.81
SCFD1-201ENST00000311943 OR51F2Q8NH61 342 aa10.01□□□□□ -0.81
SCFD1-201ENST00000311943 SRRM5B3KS81 715 aa10□□□□□ -0.81
SCFD1-201ENST00000311943 DVL1O14640 695 aa10□□□□□ -0.81
SCFD1-201ENST00000311943 SPRY1O43609 319 aaPredicted RBP10□□□□□ -0.81
SCFD1-201ENST00000311943 ANGPTL7O43827 346 aa10□□□□□ -0.81
SCFD1-201ENST00000311943 ERVFRD-1P60508 538 aa10□□□□□ -0.81
SCFD1-201ENST00000311943 GNB2P62879 340 aa10□□□□□ -0.81
SCFD1-201ENST00000311943 GNG3P63215 75 aa10□□□□□ -0.81
SCFD1-201ENST00000311943 KLHL22Q53GT1 634 aa10□□□□□ -0.81
SCFD1-201ENST00000311943 WDR25Q64LD2 544 aaPredicted RBP10□□□□□ -0.81
SCFD1-201ENST00000311943 FDX2Q6P4F2 183 aa10□□□□□ -0.81
SCFD1-201ENST00000311943 KRT74Q7RTS7 529 aa10□□□□□ -0.81
SCFD1-201ENST00000311943 SPICQ8N5J4 248 aa10□□□□□ -0.81
SCFD1-201ENST00000311943 SPERTQ8NA61 448 aa10□□□□□ -0.81
SCFD1-201ENST00000311943 ZNRF1Q8ND25 227 aa10□□□□□ -0.81
SCFD1-201ENST00000311943 OR13C9Q8NGT0 318 aa10□□□□□ -0.81
SCFD1-201ENST00000311943 RAB39BQ96DA2 213 aa10□□□□□ -0.81
SCFD1-201ENST00000311943 TMEM80Q96HE8 168 aa10□□□□□ -0.81
SCFD1-201ENST00000311943 CNBD2Q96M20 576 aa10□□□□□ -0.81
SCFD1-201ENST00000311943 TECTBQ96PL2 329 aa10□□□□□ -0.81
SCFD1-201ENST00000311943 HIST1H2AAQ96QV6 131 aa10□□□□□ -0.81
SCFD1-201ENST00000311943 MDFIQ99750 246 aa10□□□□□ -0.81
SCFD1-201ENST00000311943 SSBP3Q9BWW4 388 aaPredicted RBP10□□□□□ -0.81
SCFD1-201ENST00000311943 C7orf69Q9H7B7 122 aa10□□□□□ -0.81
SCFD1-201ENST00000311943 PLEKHA1Q9HB21 404 aa10□□□□□ -0.81
SCFD1-201ENST00000311943 ZNF391Q9UJN7 358 aa10□□□□□ -0.81
SCFD1-201ENST00000311943 DIMT1Q9UNQ2 313 aaKnown RBP10□□□□□ -0.81
SCFD1-201ENST00000311943 IGKV1D-17A0A075B6S4 117 aa10□□□□□ -0.81
SCFD1-201ENST00000311943 TRBV2A0A0J9YWF9 115 aa10□□□□□ -0.81
SCFD1-201ENST00000311943 MAGEA13PA6NCF6 341 aa10□□□□□ -0.81
SCFD1-201ENST00000311943 SNTNA6NMZ2 147 aa10□□□□□ -0.81
SCFD1-201ENST00000311943 SLC1A7O00341 560 aa10□□□□□ -0.81
SCFD1-201ENST00000311943 MTRF1O75570 445 aaKnown RBP10□□□□□ -0.81
SCFD1-201ENST00000311943 NPBWR2P48146 333 aa10□□□□□ -0.81
SCFD1-201ENST00000311943 PITPNBP48739 271 aa10□□□□□ -0.81
SCFD1-201ENST00000311943 SNU13P55769 128 aaKnown RBP10□□□□□ -0.81
SCFD1-201ENST00000311943 DGUOKQ16854 277 aa10□□□□□ -0.81
SCFD1-201ENST00000311943 KLF17Q5JT82 389 aaPredicted RBP10□□□□□ -0.81
SCFD1-201ENST00000311943 C6orf141Q5SZD1 244 aa10□□□□□ -0.81
SCFD1-201ENST00000311943 DCAF12L2Q5VW00 463 aa10□□□□□ -0.81
SCFD1-201ENST00000311943 C1orf87Q8N0U7 546 aa10□□□□□ -0.81
SCFD1-201ENST00000311943 BCL6BQ8N143 479 aaPredicted RBP10□□□□□ -0.81
SCFD1-201ENST00000311943 SYS1Q8N2H4 156 aa10□□□□□ -0.81
SCFD1-201ENST00000311943 SETD9Q8NE22 299 aa10□□□□□ -0.81
SCFD1-201ENST00000311943 OR5A2Q8NGI9 324 aa10□□□□□ -0.81
SCFD1-201ENST00000311943 TAF15Q92804 592 aaKnown RBP eCLIP10□□□□□ -0.816e-10■■■□□ 17.7
SCFD1-201ENST00000311943 SLAMF9Q96A28 289 aa10□□□□□ -0.81
SCFD1-201ENST00000311943 DACT3Q96B18 629 aaPredicted RBP10□□□□□ -0.81
SCFD1-201ENST00000311943 NEIL1Q96FI4 390 aaPredicted RBP10□□□□□ -0.81
SCFD1-201ENST00000311943 OR5M11Q96RB7 305 aa10□□□□□ -0.81
SCFD1-201ENST00000311943 MTCH1Q9NZJ7 389 aa10□□□□□ -0.81
SCFD1-201ENST00000311943 IGKV1-12A0A0C4DH73 117 aa9.99□□□□□ -0.81
SCFD1-201ENST00000311943 IGKV1D-12P01611 117 aa9.99□□□□□ -0.81
SCFD1-201ENST00000311943 SFTPBP07988 381 aa9.99□□□□□ -0.81
SCFD1-201ENST00000311943 GLRA1P23415 457 aa9.99□□□□□ -0.81
SCFD1-201ENST00000311943 DCKP27707 260 aa9.99□□□□□ -0.81
SCFD1-201ENST00000311943 DUSP1P28562 367 aa9.99□□□□□ -0.81
SCFD1-201ENST00000311943 RIPPLY3P57055 190 aa9.99□□□□□ -0.81
SCFD1-201ENST00000311943 ACTA2P62736 377 aa9.99□□□□□ -0.81
SCFD1-201ENST00000311943 ACTG2P63267 376 aa9.99□□□□□ -0.81
SCFD1-201ENST00000311943 PDCD1Q15116 288 aa9.99□□□□□ -0.81
SCFD1-201ENST00000311943 ESCO2Q56NI9 601 aa9.99□□□□□ -0.81
SCFD1-201ENST00000311943 TEX36Q5VZQ5 186 aa9.99□□□□□ -0.81
SCFD1-201ENST00000311943 DCDC5Q6ZRR9 648 aa9.99□□□□□ -0.81
SCFD1-201ENST00000311943 PDZD9Q8IXQ8 264 aa9.99□□□□□ -0.81
SCFD1-201ENST00000311943 FTMTQ8N4E7 242 aa9.99□□□□□ -0.81
SCFD1-201ENST00000311943 CD177Q8N6Q3 437 aa9.99□□□□□ -0.81
SCFD1-201ENST00000311943 OR13C3Q8NGS6 347 aa9.99□□□□□ -0.81
SCFD1-201ENST00000311943 ERGIC1Q969X5 290 aa9.99□□□□□ -0.81
SCFD1-201ENST00000311943 CHST5Q9GZS9 411 aa9.99□□□□□ -0.81
SCFD1-201ENST00000311943 FKBP14Q9NWM8 211 aa9.99□□□□□ -0.81
SCFD1-201ENST00000311943 RRP15Q9Y3B9 282 aaKnown RBP9.99□□□□□ -0.81
SCFD1-201ENST00000311943 MAB21L2Q9Y586 359 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 91.4 ms