RNA–Protein interactions for RNA: ENST00000310441.11

HCFC1-201, Transcript of host cell factor C1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HCFC1, Length 8,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-201ENST00000310441 TNFSF11O14788 317 aa13.96□□□□□ -0.18
HCFC1-201ENST00000310441 PPP2CAP67775 309 aa13.96□□□□□ -0.18
HCFC1-201ENST00000310441 Q6ZN92 141 aa13.96□□□□□ -0.18
HCFC1-201ENST00000310441 SLC25A26Q70HW3 274 aa13.96□□□□□ -0.18
HCFC1-201ENST00000310441 ADTRPQ96IZ2 230 aa13.96□□□□□ -0.18
HCFC1-201ENST00000310441 NOTCH3Q9UM47 2321 aa13.96□□□□□ -0.18
HCFC1-201ENST00000310441 MED12Q93074 2177 aa13.96□□□□□ -0.18
HCFC1-201ENST00000310441 NDUFB3O43676 98 aa13.96□□□□□ -0.18
HCFC1-201ENST00000310441 DLEU7Q6UYE1 221 aa13.96□□□□□ -0.18
HCFC1-201ENST00000310441 WSB1Q9Y6I7 421 aa13.96□□□□□ -0.18
HCFC1-201ENST00000310441 IGSF23A1L1A6 192 aa13.95□□□□□ -0.18
HCFC1-201ENST00000310441 K7EQS6 105 aa13.95□□□□□ -0.18
HCFC1-201ENST00000310441 CD3DP04234 171 aa13.95□□□□□ -0.18
HCFC1-201ENST00000310441 RPS4Y1P22090 263 aaKnown RBP13.95□□□□□ -0.18
HCFC1-201ENST00000310441 GNG3P63215 75 aa13.95□□□□□ -0.18
HCFC1-201ENST00000310441 ELSPBP1Q96BH3 223 aa13.95□□□□□ -0.18
HCFC1-201ENST00000310441 ALS2Q96Q42 1657 aa13.95□□□□□ -0.18
HCFC1-201ENST00000310441 APEHP13798 732 aaKnown RBP13.95□□□□□ -0.18
HCFC1-201ENST00000310441 YBX1P67809 324 aaKnown RBP13.95□□□□□ -0.18
HCFC1-201ENST00000310441 AFMIDQ63HM1 303 aa13.95□□□□□ -0.18
HCFC1-201ENST00000310441 Q6ZSR9 355 aa13.95□□□□□ -0.18
HCFC1-201ENST00000310441 SPICQ8N5J4 248 aa13.95□□□□□ -0.18
HCFC1-201ENST00000310441 FGF20Q9NP95 211 aaPredicted RBP13.95□□□□□ -0.18
HCFC1-201ENST00000310441 MMP24Q9Y5R2 645 aa13.95□□□□□ -0.18
HCFC1-201ENST00000310441 GYPAP02724 150 aa13.95□□□□□ -0.18
HCFC1-201ENST00000310441 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.95□□□□□ -0.18
HCFC1-201ENST00000310441 NPEPL1Q8NDH3 523 aa13.95□□□□□ -0.18
HCFC1-201ENST00000310441 MKRN2OSH3BPM6 223 aa13.95□□□□□ -0.18
HCFC1-201ENST00000310441 ZNF737O75373 536 aa13.95□□□□□ -0.18
HCFC1-201ENST00000310441 VSTM2AQ8TAG5 236 aa13.95□□□□□ -0.18
HCFC1-201ENST00000310441 EDEM2Q9BV94 578 aa13.95□□□□□ -0.18
HCFC1-201ENST00000310441 RBP4P02753 201 aa13.95□□□□□ -0.18
HCFC1-201ENST00000310441 FUCA1P04066 466 aa13.95□□□□□ -0.18
HCFC1-201ENST00000310441 SCGB1A1P11684 91 aa13.95□□□□□ -0.18
HCFC1-201ENST00000310441 SNRPNP63162 240 aaKnown RBP13.95□□□□□ -0.18
HCFC1-201ENST00000310441 RIGQ13278 110 aa13.95□□□□□ -0.18
HCFC1-201ENST00000310441 FBXL14Q8N1E6 418 aa13.95□□□□□ -0.18
HCFC1-201ENST00000310441 SLC37A2Q8TED4 501 aa13.95□□□□□ -0.18
HCFC1-201ENST00000310441 WDR89Q96FK6 387 aaPredicted RBP13.95□□□□□ -0.18
HCFC1-201ENST00000310441 SLC7A10Q9NS82 523 aa13.95□□□□□ -0.18
HCFC1-201ENST00000310441 SIRT3Q9NTG7 399 aaPredicted RBP13.95□□□□□ -0.18
HCFC1-201ENST00000310441 ISLRO14498 428 aa13.95□□□□□ -0.18
HCFC1-201ENST00000310441 AMMECR1LQ6DCA0 310 aa13.95□□□□□ -0.18
HCFC1-201ENST00000310441 FAHD2BQ6P2I3 314 aaPredicted RBP13.95□□□□□ -0.18
HCFC1-201ENST00000310441 FAHD2AQ96GK7 314 aa13.95□□□□□ -0.18
HCFC1-201ENST00000310441 ANXA10Q9UJ72 324 aa13.95□□□□□ -0.18
HCFC1-201ENST00000310441 ZNF256Q9Y2P7 627 aaPredicted RBP13.95□□□□□ -0.18
HCFC1-201ENST00000310441 EP300Q09472 2414 aaPredicted RBP13.95□□□□□ -0.18
HCFC1-201ENST00000310441 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.95□□□□□ -0.18
HCFC1-201ENST00000310441 G3V3Y1 287 aa13.95□□□□□ -0.18
HCFC1-201ENST00000310441 MBTPS2O43462 519 aa13.95□□□□□ -0.18
HCFC1-201ENST00000310441 ZNF816Q0VGE8 651 aaPredicted RBP13.95□□□□□ -0.18
HCFC1-201ENST00000310441 THAP10Q9P2Z0 257 aaPredicted RBP13.95□□□□□ -0.18
HCFC1-201ENST00000310441 DHCR7Q9UBM7 475 aaKnown RBP13.95□□□□□ -0.18
HCFC1-201ENST00000310441 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.94□□□□□ -0.18
HCFC1-201ENST00000310441 SLC17A2O00624 439 aa13.94□□□□□ -0.18
HCFC1-201ENST00000310441 KRASP01116 189 aa13.94□□□□□ -0.18
HCFC1-201ENST00000310441 CCR5P51681 352 aa13.94□□□□□ -0.18
HCFC1-201ENST00000310441 B3GNT9Q6UX72 402 aa13.94□□□□□ -0.18
HCFC1-201ENST00000310441 TMEFF1Q8IYR6 380 aa13.94□□□□□ -0.18
HCFC1-201ENST00000310441 SMIM6P0DI80 62 aa13.94□□□□□ -0.18
HCFC1-201ENST00000310441 MOB3BQ86TA1 216 aa13.94□□□□□ -0.18
HCFC1-201ENST00000310441 FAM210BQ96KR6 192 aa13.94□□□□□ -0.18
HCFC1-201ENST00000310441 TEX101Q9BY14 249 aa13.94□□□□□ -0.18
HCFC1-201ENST00000310441 ICAM5Q9UMF0 924 aa13.94□□□□□ -0.18
HCFC1-201ENST00000310441 M0R2Z0 102 aa13.94□□□□□ -0.18
HCFC1-201ENST00000310441 SDCBPO00560 298 aaPredicted RBP13.94□□□□□ -0.18
HCFC1-201ENST00000310441 PDE6DO43924 150 aa13.94□□□□□ -0.18
HCFC1-201ENST00000310441 CD99P14209 185 aa13.94□□□□□ -0.18
HCFC1-201ENST00000310441 IZUMO4Q1ZYL8 232 aa13.94□□□□□ -0.18
HCFC1-201ENST00000310441 HFEQ30201 348 aa13.94□□□□□ -0.18
HCFC1-201ENST00000310441 ALKAL1Q6UXT8 129 aa13.94□□□□□ -0.18
HCFC1-201ENST00000310441 MTURNQ8N3F0 131 aa13.94□□□□□ -0.18
HCFC1-201ENST00000310441 BAHD1Q8TBE0 780 aaPredicted RBP13.94□□□□□ -0.18
HCFC1-201ENST00000310441 TMEM218A2RU14 115 aa13.94□□□□□ -0.18
HCFC1-201ENST00000310441 MYADML2A6NDP7 307 aa13.94□□□□□ -0.18
HCFC1-201ENST00000310441 PGA4P0DJD7 388 aa13.94□□□□□ -0.18
HCFC1-201ENST00000310441 PGA5P0DJD9 388 aa13.94□□□□□ -0.18
HCFC1-201ENST00000310441 IL13RA2Q14627 380 aa13.94□□□□□ -0.18
HCFC1-201ENST00000310441 OR1F12Q8NHA8 337 aa13.94□□□□□ -0.18
HCFC1-201ENST00000310441 PTDSS2Q9BVG9 487 aa13.94□□□□□ -0.18
HCFC1-201ENST00000310441 HCFC2Q9Y5Z7 792 aa13.94□□□□□ -0.18
HCFC1-201ENST00000310441 DOCK8Q8NF50 2099 aa13.94□□□□□ -0.18
HCFC1-201ENST00000310441 MRPL37Q9BZE1 423 aaKnown RBP13.94□□□□□ -0.18
HCFC1-201ENST00000310441 OR51B4Q9Y5P0 310 aa13.94□□□□□ -0.18
HCFC1-201ENST00000310441 JMJD6Q6NYC1 403 aaPredicted RBP13.94□□□□□ -0.18
HCFC1-201ENST00000310441 OR1N1Q8NGS0 311 aa13.94□□□□□ -0.18
HCFC1-201ENST00000310441 HAND1O96004 215 aa13.94□□□□□ -0.18
HCFC1-201ENST00000310441 CD96P40200 585 aa13.94□□□□□ -0.18
HCFC1-201ENST00000310441 IL36GQ9NZH8 169 aa13.94□□□□□ -0.18
HCFC1-201ENST00000310441 WFDC8Q8IUA0 241 aa13.93□□□□□ -0.18
HCFC1-201ENST00000310441 ICOSLGO75144 302 aa13.93□□□□□ -0.18
HCFC1-201ENST00000310441 GCGP01275 180 aa13.93□□□□□ -0.18
HCFC1-201ENST00000310441 ATF1P18846 271 aa13.93□□□□□ -0.18
HCFC1-201ENST00000310441 CAPZBP47756 277 aa13.93□□□□□ -0.18
HCFC1-201ENST00000310441 MYBPHQ13203 477 aa13.93□□□□□ -0.18
HCFC1-201ENST00000310441 OR2B11Q5JQS5 317 aa13.93□□□□□ -0.18
HCFC1-201ENST00000310441 EMC6Q9BV81 110 aa13.93□□□□□ -0.18
HCFC1-201ENST00000310441 HOXC11O43248 304 aaPredicted RBP13.93□□□□□ -0.18
HCFC1-201ENST00000310441 HIST1H1EP10412 219 aaKnown RBP13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms