RNA–Protein interactions for RNA: ENST00000310301.8

VPS41-202, Transcript of VPS41, HOPS complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS41, Length 5,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-202ENST00000310301 H1FNTQ75WM6 255 aaPredicted RBP7.35□□□□□ -1.23
VPS41-202ENST00000310301 OR2M7Q8NG81 312 aa7.35□□□□□ -1.23
VPS41-202ENST00000310301 OR4S1Q8NGB4 309 aa7.35□□□□□ -1.23
VPS41-202ENST00000310301 OTOFQ9HC10 1997 aa7.35□□□□□ -1.23
VPS41-202ENST00000310301 LIN7CQ9NUP9 197 aaKnown RBP7.35□□□□□ -1.23
VPS41-202ENST00000310301 ZNF835Q9Y2P0 537 aa7.35□□□□□ -1.23
VPS41-202ENST00000310301 ZDBF2Q9HCK1 2354 aa7.35□□□□□ -1.23
VPS41-202ENST00000310301 OR5H15A6NDH6 313 aa7.35□□□□□ -1.23
VPS41-202ENST00000310301 OR5H1A6NKK0 313 aa7.35□□□□□ -1.23
VPS41-202ENST00000310301 AKR7A3O95154 331 aa7.35□□□□□ -1.23
VPS41-202ENST00000310301 ARG1P05089 322 aa7.35□□□□□ -1.23
VPS41-202ENST00000310301 ST6GAL1P15907 406 aa7.35□□□□□ -1.23
VPS41-202ENST00000310301 NPPBP16860 134 aa7.35□□□□□ -1.23
VPS41-202ENST00000310301 B2MP61769 119 aa7.35□□□□□ -1.23
VPS41-202ENST00000310301 NHLRC1Q6VVB1 395 aa7.35□□□□□ -1.23
VPS41-202ENST00000310301 HSD17B13Q7Z5P4 300 aaPredicted RBP7.35□□□□□ -1.23
VPS41-202ENST00000310301 FAM181AQ8N9Y4 354 aa7.35□□□□□ -1.23
VPS41-202ENST00000310301 MORN4Q8NDC4 146 aa7.35□□□□□ -1.23
VPS41-202ENST00000310301 BVESQ8NE79 360 aa7.35□□□□□ -1.23
VPS41-202ENST00000310301 OR2A1Q8NGT9 310 aa7.35□□□□□ -1.23
VPS41-202ENST00000310301 RTN4IP1Q8WWV3 396 aaPredicted RBP7.35□□□□□ -1.23
VPS41-202ENST00000310301 ALG14Q96F25 216 aa7.35□□□□□ -1.23
VPS41-202ENST00000310301 ST6GAL2Q96JF0 529 aa7.35□□□□□ -1.23
VPS41-202ENST00000310301 P4HTMQ9NXG6 502 aa7.35□□□□□ -1.23
VPS41-202ENST00000310301 ZNF346Q9UL40 294 aaKnown RBP7.35□□□□□ -1.23
VPS41-202ENST00000310301 ARRDC5A6NEK1 342 aa7.35□□□□□ -1.23
VPS41-202ENST00000310301 H3BP45 60 aa7.35□□□□□ -1.23
VPS41-202ENST00000310301 GATCO43716 136 aaKnown RBP7.35□□□□□ -1.23
VPS41-202ENST00000310301 GYPAP02724 150 aa7.35□□□□□ -1.23
VPS41-202ENST00000310301 EIF1P41567 113 aaKnown RBP7.35□□□□□ -1.23
VPS41-202ENST00000310301 ERVS71-1P61550 626 aa7.35□□□□□ -1.23
VPS41-202ENST00000310301 DHRS7BQ6IAN0 325 aaPredicted RBP7.35□□□□□ -1.23
VPS41-202ENST00000310301 CDC20BQ86Y33 519 aa7.35□□□□□ -1.23
VPS41-202ENST00000310301 SCCPDHQ8NBX0 429 aa7.35□□□□□ -1.23
VPS41-202ENST00000310301 ERGIC1Q969X5 290 aa7.35□□□□□ -1.23
VPS41-202ENST00000310301 TRIB1Q96RU8 372 aa7.35□□□□□ -1.23
VPS41-202ENST00000310301 JAM3Q9BX67 310 aa7.35□□□□□ -1.23
VPS41-202ENST00000310301 LHX9Q9NQ69 397 aa7.35□□□□□ -1.23
VPS41-202ENST00000310301 SLC22A13Q9Y226 551 aa7.35□□□□□ -1.23
VPS41-202ENST00000310301 PARP14Q460N5 1801 aa7.35□□□□□ -1.23
VPS41-202ENST00000310301 MED19A0JLT2 244 aaPredicted RBP7.35□□□□□ -1.23
VPS41-202ENST00000310301 PMS2P1A4D2B8 440 aa7.35□□□□□ -1.23
VPS41-202ENST00000310301 CNIH1O95406 144 aa7.35□□□□□ -1.23
VPS41-202ENST00000310301 ONECUT2O95948 504 aa7.35□□□□□ -1.23
VPS41-202ENST00000310301 SEMG1P04279 462 aa7.35□□□□□ -1.23
VPS41-202ENST00000310301 IGHV4-34P06331 123 aa7.35□□□□□ -1.23
VPS41-202ENST00000310301 SLC35E2P0CK97 266 aa7.35□□□□□ -1.23
VPS41-202ENST00000310301 LIMS3P0CW19 117 aa7.35□□□□□ -1.23
VPS41-202ENST00000310301 LIMS4P0CW20 117 aa7.35□□□□□ -1.23
VPS41-202ENST00000310301 KCNAB1Q14722 419 aa7.35□□□□□ -1.23
VPS41-202ENST00000310301 ETV3LQ6ZN32 361 aa7.35□□□□□ -1.23
VPS41-202ENST00000310301 MUC20Q8N307 709 aaPredicted RBP7.35□□□□□ -1.23
VPS41-202ENST00000310301 ISOC2Q96AB3 205 aa7.35□□□□□ -1.23
VPS41-202ENST00000310301 CLEC18AA5D8T8 446 aa7.34□□□□□ -1.23
VPS41-202ENST00000310301 FCN1O00602 326 aa7.34□□□□□ -1.23
VPS41-202ENST00000310301 FKBP2P26885 142 aaKnown RBP7.34□□□□□ -1.23
VPS41-202ENST00000310301 CNN1P51911 297 aaKnown RBP7.34□□□□□ -1.23
VPS41-202ENST00000310301 ZNF385BQ569K4 471 aa7.34□□□□□ -1.23
VPS41-202ENST00000310301 STUMQ69YW2 141 aa7.34□□□□□ -1.23
VPS41-202ENST00000310301 ABLIM2Q6H8Q1 611 aa7.34□□□□□ -1.23
VPS41-202ENST00000310301 PET117Q6UWS5 81 aa7.34□□□□□ -1.23
VPS41-202ENST00000310301 CLEC18CQ8NCF0 446 aa7.34□□□□□ -1.23
VPS41-202ENST00000310301 SAP25Q8TEE9 199 aa7.34□□□□□ -1.23
VPS41-202ENST00000310301 EMC6Q9BV81 110 aa7.34□□□□□ -1.23
VPS41-202ENST00000310301 ZNF98A6NK75 572 aa7.34□□□□□ -1.23
VPS41-202ENST00000310301 ABCD4O14678 606 aa7.34□□□□□ -1.23
VPS41-202ENST00000310301 TBX19O60806 448 aa7.34□□□□□ -1.23
VPS41-202ENST00000310301 OR5AL1P0C617 328 aa7.34□□□□□ -1.23
VPS41-202ENST00000310301 ABCD3P28288 659 aa7.34□□□□□ -1.23
VPS41-202ENST00000310301 GNB1P62873 340 aa7.34□□□□□ -1.23
VPS41-202ENST00000310301 ABHD17CQ6PCB6 329 aa7.34□□□□□ -1.23
VPS41-202ENST00000310301 VASH2Q86V25 355 aa7.34□□□□□ -1.23
VPS41-202ENST00000310301 CSF3RQ99062 836 aa7.34□□□□□ -1.23
VPS41-202ENST00000310301 NPAS1Q99742 590 aa7.34□□□□□ -1.23
VPS41-202ENST00000310301 SCNM1Q9BWG6 230 aa7.34□□□□□ -1.23
VPS41-202ENST00000310301 TNFRSF12AQ9NP84 129 aa7.34□□□□□ -1.23
VPS41-202ENST00000310301 PRDM7Q9NQW5 492 aa7.34□□□□□ -1.23
VPS41-202ENST00000310301 FOXJ3Q9UPW0 622 aa7.34□□□□□ -1.23
VPS41-202ENST00000310301 IL3RAP26951 378 aa7.34□□□□□ -1.23
VPS41-202ENST00000310301 SULT1A2P50226 295 aa7.34□□□□□ -1.23
VPS41-202ENST00000310301 AWAT1Q58HT5 328 aa7.34□□□□□ -1.23
VPS41-202ENST00000310301 SEZ6L2Q6UXD5 910 aa7.34□□□□□ -1.23
VPS41-202ENST00000310301 LHFPL2Q6ZUX7 228 aa7.34□□□□□ -1.23
VPS41-202ENST00000310301 LRP11Q86VZ4 500 aa7.34□□□□□ -1.23
VPS41-202ENST00000310301 SPICQ8N5J4 248 aa7.34□□□□□ -1.23
VPS41-202ENST00000310301 CIB3Q96Q77 187 aaPredicted RBP7.34□□□□□ -1.23
VPS41-202ENST00000310301 MS4A7Q9GZW8 240 aaPredicted RBP7.34□□□□□ -1.23
VPS41-202ENST00000310301 G3V3Y1 287 aa7.34□□□□□ -1.23
VPS41-202ENST00000310301 NID1P14543 1247 aa7.34□□□□□ -1.23
VPS41-202ENST00000310301 RPS27P42677 84 aaKnown RBP7.34□□□□□ -1.23
VPS41-202ENST00000310301 BPIFB3P59826 476 aa7.34□□□□□ -1.23
VPS41-202ENST00000310301 CSNK1G2P78368 415 aa7.34□□□□□ -1.23
VPS41-202ENST00000310301 EMC4Q5J8M3 183 aa7.34□□□□□ -1.23
VPS41-202ENST00000310301 MRM1Q6IN84 353 aaKnown RBP7.34□□□□□ -1.23
VPS41-202ENST00000310301 SIRT6Q8N6T7 355 aa7.34□□□□□ -1.23
VPS41-202ENST00000310301 OR52N4Q8NGI2 321 aa7.34□□□□□ -1.23
VPS41-202ENST00000310301 PINX1Q96BK5 328 aaKnown RBP7.34□□□□□ -1.23
VPS41-202ENST00000310301 WDFY2Q96P53 400 aa7.34□□□□□ -1.23
VPS41-202ENST00000310301 ESRP2Q9H6T0 727 aaKnown RBP7.34□□□□□ -1.23
VPS41-202ENST00000310301 GPR84Q9NQS5 396 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms