RNA–Protein interactions for RNA: ENST00000308077.9

PTCD2-201, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 1 (best)

Gene PTCD2, Length 2,195 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-201ENST00000308077 WIPF3A6NGB9 483 aa5.96□□□□□ -1.46
PTCD2-201ENST00000308077 HLA-DQB1P01920 261 aa5.96□□□□□ -1.46
PTCD2-201ENST00000308077 THBDP07204 575 aa5.96□□□□□ -1.46
PTCD2-201ENST00000308077 ZNF16P17020 682 aaPredicted RBP5.96□□□□□ -1.46
PTCD2-201ENST00000308077 RAB6AP20340 208 aa5.96□□□□□ -1.46
PTCD2-201ENST00000308077 PRKACBP22694 351 aa5.96□□□□□ -1.46
PTCD2-201ENST00000308077 PTGFRP43088 359 aa5.96□□□□□ -1.46
PTCD2-201ENST00000308077 NR4A2P43354 598 aa5.96□□□□□ -1.46
PTCD2-201ENST00000308077 MTCP1P56278 107 aa5.96□□□□□ -1.46
PTCD2-201ENST00000308077 TAS2R20P59543 309 aa5.96□□□□□ -1.46
PTCD2-201ENST00000308077 DGCR2P98153 550 aa5.96□□□□□ -1.46
PTCD2-201ENST00000308077 IGFBP7Q16270 282 aa5.96□□□□□ -1.46
PTCD2-201ENST00000308077 MSMPQ1L6U9 139 aa5.96□□□□□ -1.46
PTCD2-201ENST00000308077 C3orf36Q3SXR2 165 aa5.96□□□□□ -1.46
PTCD2-201ENST00000308077 MOGAT2Q3SYC2 334 aa5.96□□□□□ -1.46
PTCD2-201ENST00000308077 RNASE12Q5GAN4 147 aaKnown RBP5.96□□□□□ -1.46
PTCD2-201ENST00000308077 BAIAP2L2Q6UXY1 529 aa5.96□□□□□ -1.46
PTCD2-201ENST00000308077 LHFPL2Q6ZUX7 228 aa5.96□□□□□ -1.46
PTCD2-201ENST00000308077 GDPD3Q7L5L3 318 aa5.96□□□□□ -1.46
PTCD2-201ENST00000308077 CSNK2A3Q8NEV1 391 aa5.96□□□□□ -1.46
PTCD2-201ENST00000308077 TNFAIP8L1Q8WVP5 186 aa5.96□□□□□ -1.46
PTCD2-201ENST00000308077 TRIM63Q969Q1 353 aa5.96□□□□□ -1.46
PTCD2-201ENST00000308077 PTX4Q96A99 478 aa5.96□□□□□ -1.46
PTCD2-201ENST00000308077 BORCS8Q96FH0 119 aa5.96□□□□□ -1.46
PTCD2-201ENST00000308077 COX4I2Q96KJ9 171 aa5.96□□□□□ -1.46
PTCD2-201ENST00000308077 NEDD4LQ96PU5 975 aa5.96□□□□□ -1.46
PTCD2-201ENST00000308077 AUNIPQ9H7T9 357 aa5.96□□□□□ -1.46
PTCD2-201ENST00000308077 FBLN5Q9UBX5 448 aa5.96□□□□□ -1.46
PTCD2-201ENST00000308077 ESPL1Q14674 2120 aa5.96□□□□□ -1.46
PTCD2-201ENST00000308077 HEATR1Q9H583 2144 aaKnown RBP5.96□□□□□ -1.46
PTCD2-201ENST00000308077 SPTBN1Q01082 2364 aaKnown RBP5.96□□□□□ -1.46
PTCD2-201ENST00000308077 A0A0A6YYD4 124 aa5.96□□□□□ -1.46
PTCD2-201ENST00000308077 PQLC2LA1A4F0 135 aa5.96□□□□□ -1.46
PTCD2-201ENST00000308077 ISPDA4D126 451 aa5.96□□□□□ -1.46
PTCD2-201ENST00000308077 XRCC3O43542 346 aa5.96□□□□□ -1.46
PTCD2-201ENST00000308077 SPRY1O43609 319 aaPredicted RBP5.96□□□□□ -1.46
PTCD2-201ENST00000308077 CDC14BO60729 498 aa5.96□□□□□ -1.46
PTCD2-201ENST00000308077 RAC2P15153 192 aa5.96□□□□□ -1.46
PTCD2-201ENST00000308077 MNDAP41218 407 aa5.96□□□□□ -1.46
PTCD2-201ENST00000308077 ALDH3B1P43353 468 aa5.96□□□□□ -1.46
PTCD2-201ENST00000308077 RFX2P48378 723 aa5.96□□□□□ -1.46
PTCD2-201ENST00000308077 RBP2P50120 134 aa5.96□□□□□ -1.46
PTCD2-201ENST00000308077 FUT6P51993 359 aa5.96□□□□□ -1.46
PTCD2-201ENST00000308077 CAPZA1P52907 286 aa5.96□□□□□ -1.46
PTCD2-201ENST00000308077 PSG7Q13046 419 aa5.96□□□□□ -1.46
PTCD2-201ENST00000308077 TRIM16LQ309B1 348 aa5.96□□□□□ -1.46
PTCD2-201ENST00000308077 TMEM69Q5SWH9 247 aa5.96□□□□□ -1.46
PTCD2-201ENST00000308077 MTFR2Q6P444 385 aa5.96□□□□□ -1.46
PTCD2-201ENST00000308077 OR2W3Q7Z3T1 314 aa5.96□□□□□ -1.46
PTCD2-201ENST00000308077 RTN4RL2Q86UN3 420 aa5.96□□□□□ -1.46
PTCD2-201ENST00000308077 CALHM1Q8IU99 346 aa5.96□□□□□ -1.46
PTCD2-201ENST00000308077 ZDHHC23Q8IYP9 409 aa5.96□□□□□ -1.46
PTCD2-201ENST00000308077 PNLDC1Q8NA58 520 aaKnown RBP5.96□□□□□ -1.46
PTCD2-201ENST00000308077 POC5Q8NA72 575 aa5.96□□□□□ -1.46
PTCD2-201ENST00000308077 ACBD4Q8NC06 268 aa5.96□□□□□ -1.46
PTCD2-201ENST00000308077 OR10K1Q8NGX5 313 aa5.96□□□□□ -1.46
PTCD2-201ENST00000308077 KLF14Q8TD94 323 aaPredicted RBP5.96□□□□□ -1.46
PTCD2-201ENST00000308077 YIPF5Q969M3 257 aa5.96□□□□□ -1.46
PTCD2-201ENST00000308077 ITFG2Q969R8 447 aa5.96□□□□□ -1.46
PTCD2-201ENST00000308077 ITPKCQ96DU7 683 aa5.96□□□□□ -1.46
PTCD2-201ENST00000308077 ZC3HAV1LQ96H79 300 aaKnown RBP5.96□□□□□ -1.46
PTCD2-201ENST00000308077 CYYR1Q96J86 154 aa5.96□□□□□ -1.46
PTCD2-201ENST00000308077 TECTBQ96PL2 329 aa5.96□□□□□ -1.46
PTCD2-201ENST00000308077 NICN1Q9BSH3 213 aa5.96□□□□□ -1.46
PTCD2-201ENST00000308077 ATG5Q9H1Y0 275 aa5.96□□□□□ -1.46
PTCD2-201ENST00000308077 BANF2Q9H503 90 aa5.96□□□□□ -1.46
PTCD2-201ENST00000308077 MOV10Q9HCE1 1003 aaKnown RBP5.96□□□□□ -1.46
PTCD2-201ENST00000308077 RAB22AQ9UL26 194 aa5.96□□□□□ -1.46
PTCD2-201ENST00000308077 FZR1Q9UM11 496 aa5.96□□□□□ -1.46
PTCD2-201ENST00000308077 IGKV1-12A0A0C4DH73 117 aa5.95□□□□□ -1.46
PTCD2-201ENST00000308077 MEIOCA2RUB1 952 aa5.95□□□□□ -1.46
PTCD2-201ENST00000308077 NKX2-6A6NCS4 301 aa5.95□□□□□ -1.46
PTCD2-201ENST00000308077 FAM90A27PA6NNH2 459 aa5.95□□□□□ -1.46
PTCD2-201ENST00000308077 IQCF6A8MYZ5 107 aa5.95□□□□□ -1.46
PTCD2-201ENST00000308077 CTDSPLO15194 276 aa5.95□□□□□ -1.46
PTCD2-201ENST00000308077 PLA2G10O15496 165 aa5.95□□□□□ -1.46
PTCD2-201ENST00000308077 ANGPTL7O43827 346 aa5.95□□□□□ -1.46
PTCD2-201ENST00000308077 MPIG6BO95866 241 aa5.95□□□□□ -1.46
PTCD2-201ENST00000308077 PLATP00750 562 aa5.95□□□□□ -1.46
PTCD2-201ENST00000308077 IGKV1D-12P01611 117 aa5.95□□□□□ -1.46
PTCD2-201ENST00000308077 CD3GP09693 182 aa5.95□□□□□ -1.46
PTCD2-201ENST00000308077 CA6P23280 308 aa5.95□□□□□ -1.46
PTCD2-201ENST00000308077 CHRNB4P30926 498 aa5.95□□□□□ -1.46
PTCD2-201ENST00000308077 RAD52P43351 418 aa5.95□□□□□ -1.46
PTCD2-201ENST00000308077 UQCRFS1P47985 274 aa5.95□□□□□ -1.46
PTCD2-201ENST00000308077 ASCL1P50553 236 aa5.95□□□□□ -1.46
PTCD2-201ENST00000308077 GPM6AP51674 278 aa5.95□□□□□ -1.46
PTCD2-201ENST00000308077 ATP1B3P54709 279 aa5.95□□□□□ -1.46
PTCD2-201ENST00000308077 CD300CQ08708 224 aa5.95□□□□□ -1.46
PTCD2-201ENST00000308077 CEACAM21Q3KPI0 293 aa5.95□□□□□ -1.46
PTCD2-201ENST00000308077 SLC22A6Q4U2R8 563 aa5.95□□□□□ -1.46
PTCD2-201ENST00000308077 SPNS3Q6ZMD2 512 aa5.95□□□□□ -1.46
PTCD2-201ENST00000308077 GLCCI1Q86VQ1 547 aa5.95□□□□□ -1.46
PTCD2-201ENST00000308077 SMIM4Q8WVI0 70 aa5.95□□□□□ -1.46
PTCD2-201ENST00000308077 OR5P3Q8WZ94 311 aa5.95□□□□□ -1.46
PTCD2-201ENST00000308077 THAP7Q9BT49 309 aaPredicted RBP5.95□□□□□ -1.46
PTCD2-201ENST00000308077 BCL2L14Q9BZR8 327 aa5.95□□□□□ -1.46
PTCD2-201ENST00000308077 LPAR5Q9H1C0 372 aa5.95□□□□□ -1.46
PTCD2-201ENST00000308077 OR10A4Q9H209 315 aa5.95□□□□□ -1.46
PTCD2-201ENST00000308077 ING4Q9UNL4 249 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms