RNA–Protein interactions for RNA: ENST00000306726.6

PTPN9-201, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN9, Length 3,862 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-201ENST00000306726 TTRP02766 147 aa12.88□□□□□ -0.35
PTPN9-201ENST00000306726 ANOS1P23352 680 aa12.88□□□□□ -0.35
PTPN9-201ENST00000306726 CATSPERDQ86XM0 798 aa12.88□□□□□ -0.35
PTPN9-201ENST00000306726 IL1F10Q8WWZ1 152 aa12.88□□□□□ -0.35
PTPN9-201ENST00000306726 TMEM234Q8WY98 164 aa12.88□□□□□ -0.35
PTPN9-201ENST00000306726 UQCC2Q9BRT2 126 aa12.88□□□□□ -0.35
PTPN9-201ENST00000306726 UCK1Q9HA47 277 aa12.88□□□□□ -0.35
PTPN9-201ENST00000306726 ZNF275Q9NSD4 429 aaPredicted RBP12.88□□□□□ -0.35
PTPN9-201ENST00000306726 IL33O95760 270 aa12.88□□□□□ -0.35
PTPN9-201ENST00000306726 GABREP78334 506 aa12.88□□□□□ -0.35
PTPN9-201ENST00000306726 TMEM128Q5BJH2 165 aa12.88□□□□□ -0.35
PTPN9-201ENST00000306726 GPR157Q5UAW9 335 aa12.88□□□□□ -0.35
PTPN9-201ENST00000306726 FBXW12Q6X9E4 464 aa12.88□□□□□ -0.35
PTPN9-201ENST00000306726 SLC25A42Q86VD7 318 aa12.88□□□□□ -0.35
PTPN9-201ENST00000306726 TCTN2Q96GX1 697 aa12.88□□□□□ -0.35
PTPN9-201ENST00000306726 DUSP23Q9BVJ7 150 aa12.88□□□□□ -0.35
PTPN9-201ENST00000306726 PAPOLGQ9BWT3 736 aaKnown RBP12.88□□□□□ -0.35
PTPN9-201ENST00000306726 POLE3Q9NRF9 147 aa12.88□□□□□ -0.35
PTPN9-201ENST00000306726 NDRG3Q9UGV2 375 aa12.88□□□□□ -0.35
PTPN9-201ENST00000306726 PCNX1Q96RV3 2341 aa12.88□□□□□ -0.35
PTPN9-201ENST00000306726 RBMXL2O75526 392 aaKnown RBP12.88□□□□□ -0.35
PTPN9-201ENST00000306726 NHLH2Q02577 135 aa12.88□□□□□ -0.35
PTPN9-201ENST00000306726 NECAP1Q8NC96 275 aa12.88□□□□□ -0.35
PTPN9-201ENST00000306726 OR11L1Q8NGX0 322 aa12.88□□□□□ -0.35
PTPN9-201ENST00000306726 PIGCQ92535 297 aa12.88□□□□□ -0.35
PTPN9-201ENST00000306726 VN1R1Q9GZP7 353 aa12.88□□□□□ -0.35
PTPN9-201ENST00000306726 SH3BGRL3Q9H299 93 aa12.88□□□□□ -0.35
PTPN9-201ENST00000306726 C5orf66Q9H5L9 145 aa12.88□□□□□ -0.35
PTPN9-201ENST00000306726 OR2J2O76002 312 aa12.87□□□□□ -0.35
PTPN9-201ENST00000306726 RPS18P62269 152 aaKnown RBP12.87□□□□□ -0.35
PTPN9-201ENST00000306726 SLC23A3Q6PIS1 610 aa12.87□□□□□ -0.35
PTPN9-201ENST00000306726 WBP1Q96G27 269 aa12.87□□□□□ -0.35
PTPN9-201ENST00000306726 GNRHR2Q96P88 292 aa12.87□□□□□ -0.35
PTPN9-201ENST00000306726 PADI1Q9ULC6 663 aa12.87□□□□□ -0.35
PTPN9-201ENST00000306726 SLC7A11Q9UPY5 501 aa12.87□□□□□ -0.35
PTPN9-201ENST00000306726 TPPPO94811 219 aa12.87□□□□□ -0.35
PTPN9-201ENST00000306726 BGLAPP02818 100 aa12.87□□□□□ -0.35
PTPN9-201ENST00000306726 ZNF883P0CG24 379 aa12.87□□□□□ -0.35
PTPN9-201ENST00000306726 PIGPP57054 158 aa12.87□□□□□ -0.35
PTPN9-201ENST00000306726 DHRS11Q6UWP2 260 aa12.87□□□□□ -0.35
PTPN9-201ENST00000306726 HIST2H3AQ71DI3 136 aa12.87□□□□□ -0.35
PTPN9-201ENST00000306726 OR10G3Q8NGC4 313 aa12.87□□□□□ -0.35
PTPN9-201ENST00000306726 OR1L3Q8NH93 324 aa12.87□□□□□ -0.35
PTPN9-201ENST00000306726 RNF166Q96A37 237 aaPredicted RBP12.87□□□□□ -0.35
PTPN9-201ENST00000306726 NRIP2Q9BQI9 281 aa12.87□□□□□ -0.35
PTPN9-201ENST00000306726 MED9Q9NWA0 146 aa12.87□□□□□ -0.35
PTPN9-201ENST00000306726 UBE2J1Q9Y385 318 aaPredicted RBP12.87□□□□□ -0.35
PTPN9-201ENST00000306726 CYCSP99999 105 aaKnown RBP12.87□□□□□ -0.35
PTPN9-201ENST00000306726 MYBPHQ13203 477 aa12.87□□□□□ -0.35
PTPN9-201ENST00000306726 KIAA0141Q14154 515 aaPredicted RBP12.87□□□□□ -0.35
PTPN9-201ENST00000306726 PLAC9Q5JTB6 97 aa12.87□□□□□ -0.35
PTPN9-201ENST00000306726 GRINAQ7Z429 371 aa12.87□□□□□ -0.35
PTPN9-201ENST00000306726 OR8B12Q8NGG6 310 aa12.87□□□□□ -0.35
PTPN9-201ENST00000306726 HOXB13Q92826 284 aaPredicted RBP12.87□□□□□ -0.35
PTPN9-201ENST00000306726 CNTNAP3Q9BZ76 1288 aa12.87□□□□□ -0.35
PTPN9-201ENST00000306726 SLC5A7Q9GZV3 580 aa12.87□□□□□ -0.35
PTPN9-201ENST00000306726 ZNF319Q9P2F9 582 aa12.87□□□□□ -0.35
PTPN9-201ENST00000306726 AUP1Q9Y679 476 aa12.87□□□□□ -0.35
PTPN9-201ENST00000306726 AKAP6Q13023 2319 aa12.86□□□□□ -0.35
PTPN9-201ENST00000306726 TRAV39A0A0B4J263 110 aa12.86□□□□□ -0.35
PTPN9-201ENST00000306726 LMO7DNF2Z398 122 aa12.86□□□□□ -0.35
PTPN9-201ENST00000306726 DUS4LO95620 317 aaKnown RBP12.86□□□□□ -0.35
PTPN9-201ENST00000306726 HLA-HP01893 362 aa12.86□□□□□ -0.35
PTPN9-201ENST00000306726 PPA1Q15181 289 aa12.86□□□□□ -0.35
PTPN9-201ENST00000306726 ZNF260Q3ZCT1 412 aa12.86□□□□□ -0.35
PTPN9-201ENST00000306726 ZNF684Q5T5D7 378 aa12.86□□□□□ -0.35
PTPN9-201ENST00000306726 LYZL2Q7Z4W2 148 aa12.86□□□□□ -0.35
PTPN9-201ENST00000306726 SMCO4Q9NRQ5 59 aa12.86□□□□□ -0.35
PTPN9-201ENST00000306726 CADP27708 2225 aa12.86□□□□□ -0.35
PTPN9-201ENST00000306726 TNFSF14O43557 240 aa12.86□□□□□ -0.35
PTPN9-201ENST00000306726 VAMP2P63027 116 aa12.86□□□□□ -0.35
PTPN9-201ENST00000306726 IZUMO4Q1ZYL8 232 aa12.86□□□□□ -0.35
PTPN9-201ENST00000306726 OR9K2Q8NGE7 335 aa12.86□□□□□ -0.35
PTPN9-201ENST00000306726 ZDHHC12Q96GR4 267 aa12.86□□□□□ -0.35
PTPN9-201ENST00000306726 RHOVQ96L33 236 aa12.86□□□□□ -0.35
PTPN9-201ENST00000306726 SGCZQ96LD1 299 aa12.86□□□□□ -0.35
PTPN9-201ENST00000306726 DEFB126Q9BYW3 111 aa12.86□□□□□ -0.35
PTPN9-201ENST00000306726 NELFAQ9H3P2 528 aa12.86□□□□□ -0.35
PTPN9-201ENST00000306726 ALKBH4Q9NXW9 302 aa12.86□□□□□ -0.35
PTPN9-201ENST00000306726 KCNIP3Q9Y2W7 256 aa12.86□□□□□ -0.35
PTPN9-201ENST00000306726 TUBAL3A6NHL2 446 aa12.86□□□□□ -0.35
PTPN9-201ENST00000306726 ZNF735P0CB33 412 aa12.86□□□□□ -0.35
PTPN9-201ENST00000306726 CCL2P13500 99 aa12.86□□□□□ -0.35
PTPN9-201ENST00000306726 S100A2P29034 98 aa12.86□□□□□ -0.35
PTPN9-201ENST00000306726 SLC6A8P48029 635 aa12.86□□□□□ -0.35
PTPN9-201ENST00000306726 PCK2Q16822 640 aa12.86□□□□□ -0.35
PTPN9-201ENST00000306726 LINC00114Q6XXX2 140 aa12.86□□□□□ -0.35
PTPN9-201ENST00000306726 TMEM156Q8N614 296 aa12.86□□□□□ -0.35
PTPN9-201ENST00000306726 KCNG3Q8TAE7 436 aa12.86□□□□□ -0.35
PTPN9-201ENST00000306726 SLC25A43Q8WUT9 341 aaPredicted RBP12.86□□□□□ -0.35
PTPN9-201ENST00000306726 ERGIC1Q969X5 290 aa12.86□□□□□ -0.35
PTPN9-201ENST00000306726 EML5Q05BV3 1969 aa12.86□□□□□ -0.35
PTPN9-201ENST00000306726 MED13LQ71F56 2210 aa12.85□□□□□ -0.35
PTPN9-201ENST00000306726 TNRC6BQ9UPQ9 1833 aaKnown RBP12.85□□□□□ -0.35
PTPN9-201ENST00000306726 IGLV1-36A0A0B4J1U3 117 aa12.85□□□□□ -0.35
PTPN9-201ENST00000306726 C7orf77A4D0Y5 90 aa12.85□□□□□ -0.35
PTPN9-201ENST00000306726 ZFP92A6NM28 416 aa12.85□□□□□ -0.35
PTPN9-201ENST00000306726 HERV-K104P61576 105 aa12.85□□□□□ -0.35
PTPN9-201ENST00000306726 FUT7Q11130 342 aa12.85□□□□□ -0.35
PTPN9-201ENST00000306726 PABPC1L2AQ5JQF8 200 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms