RNA–Protein interactions for RNA: ENST00000305366.7

TM4SF1-201, Transcript of transmembrane 4 L six family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM4SF1, Length 1,771 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-201ENST00000305366 B3GALT5Q9Y2C3 310 aa6.84□□□□□ -1.31
TM4SF1-201ENST00000305366 CACNA1CQ13936 2221 aa6.84□□□□□ -1.31
TM4SF1-201ENST00000305366 ZNF407Q9C0G0 2248 aa6.83□□□□□ -1.32
TM4SF1-201ENST00000305366 LIPT2A6NK58 231 aa6.83□□□□□ -1.32
TM4SF1-201ENST00000305366 F5H5P2 479 aa6.83□□□□□ -1.32
TM4SF1-201ENST00000305366 H3BSH0 61 aa6.83□□□□□ -1.32
TM4SF1-201ENST00000305366 NDUFS8O00217 210 aa6.83□□□□□ -1.32
TM4SF1-201ENST00000305366 MPZL1O95297 269 aa6.83□□□□□ -1.32
TM4SF1-201ENST00000305366 RAB3DO95716 219 aa6.83□□□□□ -1.32
TM4SF1-201ENST00000305366 PMS2P2O95744 297 aa6.83□□□□□ -1.32
TM4SF1-201ENST00000305366 RLN1P04808 185 aa6.83□□□□□ -1.32
TM4SF1-201ENST00000305366 MPZP25189 248 aa6.83□□□□□ -1.32
TM4SF1-201ENST00000305366 HSD11B1P28845 292 aa6.83□□□□□ -1.32
TM4SF1-201ENST00000305366 CALCRP30988 508 aa6.83□□□□□ -1.32
TM4SF1-201ENST00000305366 SEC61A1P61619 476 aaKnown RBP6.83□□□□□ -1.32
TM4SF1-201ENST00000305366 DAZAP2Q15038 168 aaPredicted RBP6.83□□□□□ -1.32
TM4SF1-201ENST00000305366 ZMYND11Q15326 602 aa6.83□□□□□ -1.32
TM4SF1-201ENST00000305366 OR7A5Q15622 319 aa6.83□□□□□ -1.32
TM4SF1-201ENST00000305366 DEFB113Q30KQ7 82 aa6.83□□□□□ -1.32
TM4SF1-201ENST00000305366 Q3ZCU0 254 aa6.83□□□□□ -1.32
TM4SF1-201ENST00000305366 FAM209AQ5JX71 171 aa6.83□□□□□ -1.32
TM4SF1-201ENST00000305366 GLYATL3Q5SZD4 288 aa6.83□□□□□ -1.32
TM4SF1-201ENST00000305366 NHLRC1Q6VVB1 395 aa6.83□□□□□ -1.32
TM4SF1-201ENST00000305366 P4HA3Q7Z4N8 544 aa6.83□□□□□ -1.32
TM4SF1-201ENST00000305366 DCXRQ7Z4W1 244 aa6.83□□□□□ -1.32
TM4SF1-201ENST00000305366 COMMD7Q86VX2 200 aa6.83□□□□□ -1.32
TM4SF1-201ENST00000305366 MUC20Q8N307 709 aaPredicted RBP6.83□□□□□ -1.32
TM4SF1-201ENST00000305366 ZNF565Q8N9K5 539 aa6.83□□□□□ -1.32
TM4SF1-201ENST00000305366 WDSUB1Q8N9V3 476 aa6.83□□□□□ -1.32
TM4SF1-201ENST00000305366 OR52B4Q8NGK2 314 aa6.83□□□□□ -1.32
TM4SF1-201ENST00000305366 DNAJA3Q96EY1 480 aa6.83□□□□□ -1.32
TM4SF1-201ENST00000305366 MRGPRX4Q96LA9 322 aa6.83□□□□□ -1.32
TM4SF1-201ENST00000305366 DHRS9Q9BPW9 319 aa6.83□□□□□ -1.32
TM4SF1-201ENST00000305366 SPXQ9BT56 116 aa6.83□□□□□ -1.32
TM4SF1-201ENST00000305366 CALHM2Q9HA72 323 aa6.83□□□□□ -1.32
TM4SF1-201ENST00000305366 FAM206AQ9NX38 181 aa6.83□□□□□ -1.32
TM4SF1-201ENST00000305366 FBLN5Q9UBX5 448 aa6.83□□□□□ -1.32
TM4SF1-201ENST00000305366 FBXL2Q9UKC9 423 aa6.83□□□□□ -1.32
TM4SF1-201ENST00000305366 RAB22AQ9UL26 194 aa6.83□□□□□ -1.32
TM4SF1-201ENST00000305366 EMC9Q9Y3B6 208 aa6.83□□□□□ -1.32
TM4SF1-201ENST00000305366 INTS1Q8N201 2190 aaKnown RBP6.83□□□□□ -1.32
TM4SF1-201ENST00000305366 TMEM269A0A1B0GVZ9 245 aa6.82□□□□□ -1.32
TM4SF1-201ENST00000305366 MBD3L4A6NDZ8 208 aaPredicted RBP6.82□□□□□ -1.32
TM4SF1-201ENST00000305366 MBD3L3A6NE82 208 aaPredicted RBP6.82□□□□□ -1.32
TM4SF1-201ENST00000305366 MBD3L5A6NJ08 208 aaPredicted RBP6.82□□□□□ -1.32
TM4SF1-201ENST00000305366 CBR3O75828 277 aa6.82□□□□□ -1.32
TM4SF1-201ENST00000305366 SCGNO76038 276 aa6.82□□□□□ -1.32
TM4SF1-201ENST00000305366 ACTL6AO96019 429 aa6.82□□□□□ -1.32
TM4SF1-201ENST00000305366 QDPRP09417 244 aa6.82□□□□□ -1.32
TM4SF1-201ENST00000305366 H2BFMP0C1H6 154 aa6.82□□□□□ -1.32
TM4SF1-201ENST00000305366 ZNF735P0CB33 412 aa6.82□□□□□ -1.32
TM4SF1-201ENST00000305366 PPP3CBP16298 524 aa6.82□□□□□ -1.32
TM4SF1-201ENST00000305366 S100A11P31949 105 aa6.82□□□□□ -1.32
TM4SF1-201ENST00000305366 PTGDSP41222 190 aa6.82□□□□□ -1.32
TM4SF1-201ENST00000305366 H2BFSP57053 126 aa6.82□□□□□ -1.32
TM4SF1-201ENST00000305366 GMFBP60983 142 aa6.82□□□□□ -1.32
TM4SF1-201ENST00000305366 SRSF4Q08170 494 aaKnown RBP6.82□□□□□ -1.32
TM4SF1-201ENST00000305366 FAM27E3Q08E93 113 aa6.82□□□□□ -1.32
TM4SF1-201ENST00000305366 FOXF1Q12946 379 aa6.82□□□□□ -1.32
TM4SF1-201ENST00000305366 AANATQ16613 207 aa6.82□□□□□ -1.32
TM4SF1-201ENST00000305366 OTPQ5XKR4 325 aa6.82□□□□□ -1.32
TM4SF1-201ENST00000305366 CLEC2AQ6UVW9 174 aa6.82□□□□□ -1.32
TM4SF1-201ENST00000305366 IDO2Q6ZQW0 420 aa6.82□□□□□ -1.32
TM4SF1-201ENST00000305366 CHMP1BQ7LBR1 199 aa6.82□□□□□ -1.32
TM4SF1-201ENST00000305366 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.82□□□□□ -1.32
TM4SF1-201ENST00000305366 CNEP1R1Q8N9A8 125 aa6.82□□□□□ -1.32
TM4SF1-201ENST00000305366 OR51A2Q8NGJ7 313 aa6.82□□□□□ -1.32
TM4SF1-201ENST00000305366 OR5M1Q8NGP8 315 aa6.82□□□□□ -1.32
TM4SF1-201ENST00000305366 MBD3L2Q8NHZ7 208 aaPredicted RBP6.82□□□□□ -1.32
TM4SF1-201ENST00000305366 NANOS1Q8WY41 292 aaKnown RBP6.82□□□□□ -1.32
TM4SF1-201ENST00000305366 TMEM41AQ96HV5 264 aa6.82□□□□□ -1.32
TM4SF1-201ENST00000305366 KCNK15Q9H427 330 aa6.82□□□□□ -1.32
TM4SF1-201ENST00000305366 PLEKHF2Q9H8W4 249 aa6.82□□□□□ -1.32
TM4SF1-201ENST00000305366 SLC2A8Q9NY64 477 aa6.82□□□□□ -1.32
TM4SF1-201ENST00000305366 FOXD3Q9UJU5 478 aaPredicted RBP6.82□□□□□ -1.32
TM4SF1-201ENST00000305366 DKKL1Q9UK85 242 aa6.82□□□□□ -1.32
TM4SF1-201ENST00000305366 ITPR3Q14573 2671 aa6.82□□□□□ -1.32
TM4SF1-201ENST00000305366 MAP1AP78559 2803 aaPredicted RBP6.82□□□□□ -1.32
TM4SF1-201ENST00000305366 AKAP6Q13023 2319 aa6.82□□□□□ -1.32
TM4SF1-201ENST00000305366 IGKV1D-43A0A0B4J1Z2 117 aa6.82□□□□□ -1.32
TM4SF1-201ENST00000305366 TMEM82A0PJX8 343 aa6.82□□□□□ -1.32
TM4SF1-201ENST00000305366 I3L521 148 aa6.82□□□□□ -1.32
TM4SF1-201ENST00000305366 RP2O75695 350 aa6.82□□□□□ -1.32
TM4SF1-201ENST00000305366 CYB5AP00167 134 aa6.82□□□□□ -1.32
TM4SF1-201ENST00000305366 ZNF35P13682 527 aa6.82□□□□□ -1.32
TM4SF1-201ENST00000305366 RPA2P15927 270 aa6.82□□□□□ -1.32
TM4SF1-201ENST00000305366 PRKACBP22694 351 aa6.82□□□□□ -1.32
TM4SF1-201ENST00000305366 BDKRB2P30411 391 aa6.82□□□□□ -1.32
TM4SF1-201ENST00000305366 NKX6-1P78426 367 aaPredicted RBP6.82□□□□□ -1.32
TM4SF1-201ENST00000305366 POU3F1Q03052 451 aaPredicted RBP6.82□□□□□ -1.32
TM4SF1-201ENST00000305366 FMODQ06828 376 aa6.82□□□□□ -1.32
TM4SF1-201ENST00000305366 BAMBIQ13145 260 aa6.82□□□□□ -1.32
TM4SF1-201ENST00000305366 HLXQ14774 488 aaPredicted RBP6.82□□□□□ -1.32
TM4SF1-201ENST00000305366 MEF2DQ14814 521 aa6.82□□□□□ -1.32
TM4SF1-201ENST00000305366 ADIPOQQ15848 244 aa6.82□□□□□ -1.32
TM4SF1-201ENST00000305366 ZNF239Q16600 458 aaKnown RBP6.82□□□□□ -1.32
TM4SF1-201ENST00000305366 ZNF260Q3ZCT1 412 aa6.82□□□□□ -1.32
TM4SF1-201ENST00000305366 FBXL19-AS1Q494R0 122 aa6.82□□□□□ -1.32
TM4SF1-201ENST00000305366 THEM4Q5T1C6 240 aa6.82□□□□□ -1.32
TM4SF1-201ENST00000305366 LPCAT3Q6P1A2 487 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms