RNA–Protein interactions for RNA: ENST00000301732.9

ABCA3-201, Transcript of ATP binding cassette subfamily A member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA3, Length 6,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-201ENST00000301732 MEOX1P50221 254 aa11.09□□□□□ -0.63
ABCA3-201ENST00000301732 COTL1Q14019 142 aa11.09□□□□□ -0.63
ABCA3-201ENST00000301732 HLA-BQ31612 363 aa11.09□□□□□ -0.63
ABCA3-201ENST00000301732 OR1K1Q8NGR3 316 aa11.09□□□□□ -0.63
ABCA3-201ENST00000301732 WFIKKN1Q96NZ8 548 aa11.09□□□□□ -0.63
ABCA3-201ENST00000301732 GABARAPL3Q9BY60 117 aa11.09□□□□□ -0.63
ABCA3-201ENST00000301732 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.09□□□□□ -0.63
ABCA3-201ENST00000301732 RICTORQ6R327 1708 aa11.09□□□□□ -0.63
ABCA3-201ENST00000301732 TRBV23-1A0A0A0MS06 115 aa11.09□□□□□ -0.63
ABCA3-201ENST00000301732 M0R2Z0 102 aa11.09□□□□□ -0.63
ABCA3-201ENST00000301732 CST2P09228 141 aa11.09□□□□□ -0.63
ABCA3-201ENST00000301732 HSD17B7P56937 341 aa11.09□□□□□ -0.63
ABCA3-201ENST00000301732 PRSS41Q7RTY9 318 aa11.09□□□□□ -0.63
ABCA3-201ENST00000301732 HSD17B13Q7Z5P4 300 aaPredicted RBP11.09□□□□□ -0.63
ABCA3-201ENST00000301732 OR1J1Q8NGS3 322 aa11.09□□□□□ -0.63
ABCA3-201ENST00000301732 CDCA4Q9BXL8 241 aa11.09□□□□□ -0.63
ABCA3-201ENST00000301732 WSB1Q9Y6I7 421 aa11.09□□□□□ -0.63
ABCA3-201ENST00000301732 DND1Q8IYX4 353 aaKnown RBP11.09□□□□□ -0.63
ABCA3-201ENST00000301732 GABARAPL1Q9H0R8 117 aa11.09□□□□□ -0.63
ABCA3-201ENST00000301732 PARP4Q9UKK3 1724 aaKnown RBP11.09□□□□□ -0.63
ABCA3-201ENST00000301732 TLCD2A6NGC4 264 aa11.09□□□□□ -0.63
ABCA3-201ENST00000301732 KLRC4-KLRK1H3BQV0 150 aa11.09□□□□□ -0.63
ABCA3-201ENST00000301732 TNFRSF10CO14798 259 aa11.09□□□□□ -0.63
ABCA3-201ENST00000301732 SBK3P0C264 359 aa11.09□□□□□ -0.63
ABCA3-201ENST00000301732 OR5AC1P0C628 307 aa11.09□□□□□ -0.63
ABCA3-201ENST00000301732 OTX1P32242 354 aaPredicted RBP11.09□□□□□ -0.63
ABCA3-201ENST00000301732 NOVA1P51513 510 aaKnown RBP11.09□□□□□ -0.63
ABCA3-201ENST00000301732 FSCN3Q9NQT6 498 aa11.09□□□□□ -0.63
ABCA3-201ENST00000301732 RHBDL1O75783 438 aa11.08□□□□□ -0.64
ABCA3-201ENST00000301732 Q3ZCU0 254 aa11.08□□□□□ -0.64
ABCA3-201ENST00000301732 LYG1Q8N1E2 194 aa11.08□□□□□ -0.64
ABCA3-201ENST00000301732 OR8A1Q8NGG7 326 aa11.08□□□□□ -0.64
ABCA3-201ENST00000301732 NGBQ9NPG2 151 aa11.08□□□□□ -0.64
ABCA3-201ENST00000301732 GOSR1O95249 250 aa11.08□□□□□ -0.64
ABCA3-201ENST00000301732 WNT11O96014 354 aa11.08□□□□□ -0.64
ABCA3-201ENST00000301732 MMP9P14780 707 aa11.08□□□□□ -0.64
ABCA3-201ENST00000301732 MYBPHQ13203 477 aa11.08□□□□□ -0.64
ABCA3-201ENST00000301732 BAHD1Q8TBE0 780 aaPredicted RBP11.08□□□□□ -0.64
ABCA3-201ENST00000301732 OR2A14Q96R47 310 aa11.08□□□□□ -0.64
ABCA3-201ENST00000301732 FOXJ3Q9UPW0 622 aa11.08□□□□□ -0.64
ABCA3-201ENST00000301732 RP1P56715 2156 aa11.08□□□□□ -0.64
ABCA3-201ENST00000301732 LAMB4A4D0S4 1761 aa11.08□□□□□ -0.64
ABCA3-201ENST00000301732 TRGV8A0A0C4DH27 118 aa11.08□□□□□ -0.64
ABCA3-201ENST00000301732 ICAM2P13598 275 aa11.08□□□□□ -0.64
ABCA3-201ENST00000301732 IQCJQ1A5X6 159 aa11.08□□□□□ -0.64
ABCA3-201ENST00000301732 GLDNQ6ZMI3 551 aaPredicted RBP11.08□□□□□ -0.64
ABCA3-201ENST00000301732 CA13Q8N1Q1 262 aa11.08□□□□□ -0.64
ABCA3-201ENST00000301732 C17orf47Q8NEP4 570 aa11.08□□□□□ -0.64
ABCA3-201ENST00000301732 OR1B1Q8NGR6 318 aa11.08□□□□□ -0.64
ABCA3-201ENST00000301732 VN1R17PQ8TDU5 208 aa11.08□□□□□ -0.64
ABCA3-201ENST00000301732 FAM210BQ96KR6 192 aa11.08□□□□□ -0.64
ABCA3-201ENST00000301732 POLR2GP62487 172 aaKnown RBP eCLIP11.08□□□□□ -0.64
ABCA3-201ENST00000301732 ZNF154Q13106 437 aa11.08□□□□□ -0.64
ABCA3-201ENST00000301732 CEACAM16Q2WEN9 425 aa11.08□□□□□ -0.64
ABCA3-201ENST00000301732 KLHDC1Q8N7A1 406 aa11.08□□□□□ -0.64
ABCA3-201ENST00000301732 EDAQ92838 391 aa11.08□□□□□ -0.64
ABCA3-201ENST00000301732 EXTL1Q92935 676 aa11.08□□□□□ -0.64
ABCA3-201ENST00000301732 DLL4Q9NR61 685 aa11.08□□□□□ -0.64
ABCA3-201ENST00000301732 PRSS1P07477 247 aa11.08□□□□□ -0.64
ABCA3-201ENST00000301732 APOBEC1P41238 236 aaKnown RBP11.08□□□□□ -0.64
ABCA3-201ENST00000301732 ECI1P42126 302 aa11.08□□□□□ -0.64
ABCA3-201ENST00000301732 RHOBP62745 196 aa11.08□□□□□ -0.64
ABCA3-201ENST00000301732 RNFT1Q5M7Z0 435 aa11.08□□□□□ -0.64
ABCA3-201ENST00000301732 WIPI1Q5MNZ9 446 aaPredicted RBP11.08□□□□□ -0.64
ABCA3-201ENST00000301732 CLDN23Q96B33 292 aa11.08□□□□□ -0.64
ABCA3-201ENST00000301732 GALMQ96C23 342 aa11.08□□□□□ -0.64
ABCA3-201ENST00000301732 CNRIP1Q96F85 164 aaPredicted RBP11.08□□□□□ -0.64
ABCA3-201ENST00000301732 KIR3DX1Q9H7L2 352 aa11.08□□□□□ -0.64
ABCA3-201ENST00000301732 HES4Q9HCC6 221 aa11.08□□□□□ -0.64
ABCA3-201ENST00000301732 LINC01553A4QN01 128 aa11.07□□□□□ -0.64
ABCA3-201ENST00000301732 ADH4P08319 380 aa11.07□□□□□ -0.64
ABCA3-201ENST00000301732 CCKARP32238 428 aa11.07□□□□□ -0.64
ABCA3-201ENST00000301732 PYCR3Q53H96 274 aa11.07□□□□□ -0.64
ABCA3-201ENST00000301732 ADAMTSL4Q6UY14 1074 aa11.07□□□□□ -0.64
ABCA3-201ENST00000301732 GPR137Q96N19 417 aa11.07□□□□□ -0.64
ABCA3-201ENST00000301732 RGPD8O14715 1765 aaPredicted RBP11.07□□□□□ -0.64
ABCA3-201ENST00000301732 TEX50A0A1B0GTY4 177 aa11.07□□□□□ -0.64
ABCA3-201ENST00000301732 DYNLT3P51808 116 aa11.07□□□□□ -0.64
ABCA3-201ENST00000301732 TMEM97Q5BJF2 176 aa11.07□□□□□ -0.64
ABCA3-201ENST00000301732 WDR38Q5JTN6 314 aa11.07□□□□□ -0.64
ABCA3-201ENST00000301732 FCRL6Q6DN72 434 aa11.07□□□□□ -0.64
ABCA3-201ENST00000301732 MRM1Q6IN84 353 aaKnown RBP11.07□□□□□ -0.64
ABCA3-201ENST00000301732 SSMEM1Q8WWF3 244 aa11.07□□□□□ -0.64
ABCA3-201ENST00000301732 EVA1AQ9H8M9 152 aa11.07□□□□□ -0.64
ABCA3-201ENST00000301732 C19orf53Q9UNZ5 99 aaPredicted RBP11.07□□□□□ -0.64
ABCA3-201ENST00000301732 FUT9Q9Y231 359 aa11.07□□□□□ -0.64
ABCA3-201ENST00000301732 LSM2Q9Y333 95 aaKnown RBP11.07□□□□□ -0.64
ABCA3-201ENST00000301732 ZNF142P52746 1687 aaPredicted RBP11.07□□□□□ -0.64
ABCA3-201ENST00000301732 TTC3P53804 2025 aa11.07□□□□□ -0.64
ABCA3-201ENST00000301732 HPXP02790 462 aa11.07□□□□□ -0.64
ABCA3-201ENST00000301732 MEOX2P50222 304 aa11.07□□□□□ -0.64
ABCA3-201ENST00000301732 DHRS2Q13268 280 aa11.07□□□□□ -0.64
ABCA3-201ENST00000301732 ZNF841Q6ZN19 808 aa11.07□□□□□ -0.64
ABCA3-201ENST00000301732 ANKRD53Q8N9V6 530 aa11.07□□□□□ -0.64
ABCA3-201ENST00000301732 BCL2L2Q92843 193 aaPredicted RBP11.07□□□□□ -0.64
ABCA3-201ENST00000301732 SLIRPQ9GZT3 109 aaKnown RBP11.07□□□□□ -0.64
ABCA3-201ENST00000301732 MT-ATP6P00846 226 aa11.07□□□□□ -0.64
ABCA3-201ENST00000301732 EIF1P41567 113 aaKnown RBP11.07□□□□□ -0.64
ABCA3-201ENST00000301732 GNG4P50150 75 aa11.07□□□□□ -0.64
ABCA3-201ENST00000301732 ZNF83P51522 516 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms