RNA–Protein interactions for RNA: ENST00000301280.9

CHAF1A-201, Transcript of chromatin assembly factor 1 subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHAF1A, Length 3,339 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAF1A-201ENST00000301280 OR5AS1Q8N127 324 aa13.67□□□□□ -0.22
CHAF1A-201ENST00000301280 OR5M9Q8NGP3 310 aa13.67□□□□□ -0.22
CHAF1A-201ENST00000301280 OR10D3Q8NH80 312 aa13.67□□□□□ -0.22
CHAF1A-201ENST00000301280 KCNG3Q8TAE7 436 aa13.67□□□□□ -0.22
CHAF1A-201ENST00000301280 SLC6A15Q9H2J7 730 aa13.67□□□□□ -0.22
CHAF1A-201ENST00000301280 IGKV1D-8A0A087WSZ0 117 aa13.66□□□□□ -0.22
CHAF1A-201ENST00000301280 C9orf170A2RU37 121 aa13.66□□□□□ -0.22
CHAF1A-201ENST00000301280 SSX5O60225 188 aa13.66□□□□□ -0.22
CHAF1A-201ENST00000301280 ISG15P05161 165 aa13.66□□□□□ -0.22
CHAF1A-201ENST00000301280 PRKACAP17612 351 aa13.66□□□□□ -0.22
CHAF1A-201ENST00000301280 PTGFRP43088 359 aa13.66□□□□□ -0.22
CHAF1A-201ENST00000301280 DCAF12Q5T6F0 453 aa13.66□□□□□ -0.22
CHAF1A-201ENST00000301280 PLCXD3Q63HM9 321 aa13.66□□□□□ -0.22
CHAF1A-201ENST00000301280 TIPARPQ7Z3E1 657 aaKnown RBP13.66□□□□□ -0.22
CHAF1A-201ENST00000301280 OR5L1Q8NGL2 311 aa13.66□□□□□ -0.22
CHAF1A-201ENST00000301280 FNDC9Q8TBE3 224 aa13.66□□□□□ -0.22
CHAF1A-201ENST00000301280 ZNF2Q9BSG1 426 aaPredicted RBP13.66□□□□□ -0.22
CHAF1A-201ENST00000301280 TREM1Q9NP99 234 aa13.66□□□□□ -0.22
CHAF1A-201ENST00000301280 LHX6Q9UPM6 363 aa13.66□□□□□ -0.22
CHAF1A-201ENST00000301280 ABCA4P78363 2273 aa13.66□□□□□ -0.22
CHAF1A-201ENST00000301280 IGHV1-45A0A0A0MS14 117 aa13.66□□□□□ -0.22
CHAF1A-201ENST00000301280 FARS2O95363 451 aaKnown RBP13.66□□□□□ -0.22
CHAF1A-201ENST00000301280 ONECUT2O95948 504 aa13.66□□□□□ -0.22
CHAF1A-201ENST00000301280 COX6A1P12074 109 aa13.66□□□□□ -0.22
CHAF1A-201ENST00000301280 ACKR3P25106 362 aa13.66□□□□□ -0.22
CHAF1A-201ENST00000301280 ACER2Q5QJU3 275 aa13.66□□□□□ -0.22
CHAF1A-201ENST00000301280 CDH26Q8IXH8 852 aa13.66□□□□□ -0.22
CHAF1A-201ENST00000301280 ASB13Q8WXK3 278 aa13.66□□□□□ -0.22
CHAF1A-201ENST00000301280 FOXRED1Q96CU9 486 aaPredicted RBP13.66□□□□□ -0.22
CHAF1A-201ENST00000301280 CDC6Q99741 560 aa13.66□□□□□ -0.22
CHAF1A-201ENST00000301280 MRPL13Q9BYD1 178 aaKnown RBP13.66□□□□□ -0.22
CHAF1A-201ENST00000301280 BARX1Q9HBU1 254 aaPredicted RBP13.66□□□□□ -0.22
CHAF1A-201ENST00000301280 MYOZ1Q9NP98 299 aaPredicted RBP13.66□□□□□ -0.22
CHAF1A-201ENST00000301280 HMSDA8MTL9 139 aa13.66□□□□□ -0.22
CHAF1A-201ENST00000301280 KRBOX1C9JBD0 128 aa13.66□□□□□ -0.22
CHAF1A-201ENST00000301280 ZIC3O60481 467 aa13.66□□□□□ -0.22
CHAF1A-201ENST00000301280 OMGP23515 440 aa13.66□□□□□ -0.22
CHAF1A-201ENST00000301280 LY6G6FQ5SQ64 297 aa13.66□□□□□ -0.22
CHAF1A-201ENST00000301280 NKAIN3Q8N8D7 197 aa13.66□□□□□ -0.22
CHAF1A-201ENST00000301280 ZNF107Q9UII5 783 aaPredicted RBP13.66□□□□□ -0.22
CHAF1A-201ENST00000301280 SPTBN1Q01082 2364 aaKnown RBP13.65□□□□□ -0.22
CHAF1A-201ENST00000301280 PINLYPA6NC86 204 aa13.65□□□□□ -0.22
CHAF1A-201ENST00000301280 FBXL14Q8N1E6 418 aa13.65□□□□□ -0.22
CHAF1A-201ENST00000301280 TMEM229BQ8NBD8 167 aa13.65□□□□□ -0.22
CHAF1A-201ENST00000301280 PTX4Q96A99 478 aa13.65□□□□□ -0.22
CHAF1A-201ENST00000301280 LYZL4Q96KX0 146 aa13.65□□□□□ -0.22
CHAF1A-201ENST00000301280 AQP7P3A6NL99 342 aa13.65□□□□□ -0.22
CHAF1A-201ENST00000301280 HIST1H1DP16402 221 aaKnown RBP13.65□□□□□ -0.22
CHAF1A-201ENST00000301280 CYB561P49447 251 aa13.65□□□□□ -0.22
CHAF1A-201ENST00000301280 C1orf210Q8IVY1 113 aa13.65□□□□□ -0.22
CHAF1A-201ENST00000301280 SLC25A21Q9BQT8 299 aaPredicted RBP13.65□□□□□ -0.22
CHAF1A-201ENST00000301280 PIGQQ9BRB3 760 aa13.65□□□□□ -0.22
CHAF1A-201ENST00000301280 ALX4Q9H161 411 aaPredicted RBP13.65□□□□□ -0.22
CHAF1A-201ENST00000301280 AQP8O94778 261 aa13.64□□□□□ -0.23
CHAF1A-201ENST00000301280 LIFP15018 202 aa13.64□□□□□ -0.23
CHAF1A-201ENST00000301280 NME2P22392 152 aa13.64□□□□□ -0.23
CHAF1A-201ENST00000301280 MSX1P28360 303 aa13.64□□□□□ -0.23
CHAF1A-201ENST00000301280 AIMP2Q13155 320 aaKnown RBP13.64□□□□□ -0.23
CHAF1A-201ENST00000301280 ABCA11PQ4W5N1 156 aa13.64□□□□□ -0.23
CHAF1A-201ENST00000301280 GCNT2Q8N0V5 402 aa13.64□□□□□ -0.23
CHAF1A-201ENST00000301280 OR2Y1Q8NGV0 311 aa13.64□□□□□ -0.23
CHAF1A-201ENST00000301280 OR6X1Q8NH79 312 aa13.64□□□□□ -0.23
CHAF1A-201ENST00000301280 NAA11Q9BSU3 229 aaPredicted RBP13.64□□□□□ -0.23
CHAF1A-201ENST00000301280 DEPPQ9NTK1 212 aa13.64□□□□□ -0.23
CHAF1A-201ENST00000301280 SULT1C2O00338 296 aa13.64□□□□□ -0.23
CHAF1A-201ENST00000301280 GEMIN2O14893 280 aaKnown RBP13.64□□□□□ -0.23
CHAF1A-201ENST00000301280 EIF1P41567 113 aaKnown RBP13.64□□□□□ -0.23
CHAF1A-201ENST00000301280 AKR1C3P42330 323 aa13.64□□□□□ -0.23
CHAF1A-201ENST00000301280 ID4P47928 161 aa13.64□□□□□ -0.23
CHAF1A-201ENST00000301280 LYG2Q86SG7 212 aa13.64□□□□□ -0.23
CHAF1A-201ENST00000301280 IL1F10Q8WWZ1 152 aa13.64□□□□□ -0.23
CHAF1A-201ENST00000301280 SPTSSAQ969W0 71 aa13.64□□□□□ -0.23
CHAF1A-201ENST00000301280 ZNF488Q96MN9 340 aa13.64□□□□□ -0.23
CHAF1A-201ENST00000301280 C5orf49A4QMS7 147 aa13.64□□□□□ -0.23
CHAF1A-201ENST00000301280 SLC25A53Q5H9E4 307 aa13.64□□□□□ -0.23
CHAF1A-201ENST00000301280 ABHD17BQ5VST6 288 aa13.64□□□□□ -0.23
CHAF1A-201ENST00000301280 MRPL14Q6P1L8 145 aaKnown RBP13.64□□□□□ -0.23
CHAF1A-201ENST00000301280 CT55Q8WUE5 264 aa13.64□□□□□ -0.23
CHAF1A-201ENST00000301280 CMSS1Q9BQ75 279 aaKnown RBP13.64□□□□□ -0.23
CHAF1A-201ENST00000301280 IL17BQ9UHF5 180 aa13.64□□□□□ -0.23
CHAF1A-201ENST00000301280 TCFL5Q9UL49 500 aa13.64□□□□□ -0.23
CHAF1A-201ENST00000301280 MUC6Q6W4X9 2439 aa13.64□□□□□ -0.23
CHAF1A-201ENST00000301280 MRPL33O75394 65 aaKnown RBP13.63□□□□□ -0.23
CHAF1A-201ENST00000301280 SELEP16581 610 aa13.63□□□□□ -0.23
CHAF1A-201ENST00000301280 ZNF17P17021 662 aa13.63□□□□□ -0.23
CHAF1A-201ENST00000301280 SRSF4Q08170 494 aaKnown RBP13.63□□□□□ -0.23
CHAF1A-201ENST00000301280 DRAM2Q6UX65 266 aa13.63□□□□□ -0.23
CHAF1A-201ENST00000301280 SLC25A26Q70HW3 274 aa13.63□□□□□ -0.23
CHAF1A-201ENST00000301280 DOK3Q7L591 496 aa13.63□□□□□ -0.23
CHAF1A-201ENST00000301280 HSD17B13Q7Z5P4 300 aaPredicted RBP13.63□□□□□ -0.23
CHAF1A-201ENST00000301280 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.63□□□□□ -0.23
CHAF1A-201ENST00000301280 NAXDQ8IW45 347 aa13.63□□□□□ -0.23
CHAF1A-201ENST00000301280 MCEMP1Q8IX19 187 aa13.63□□□□□ -0.23
CHAF1A-201ENST00000301280 TERB2Q8NHR7 220 aa13.63□□□□□ -0.23
CHAF1A-201ENST00000301280 NELFAQ9H3P2 528 aa13.63□□□□□ -0.23
CHAF1A-201ENST00000301280 FAM96BQ9Y3D0 163 aa13.63□□□□□ -0.23
CHAF1A-201ENST00000301280 KIAA1549Q9HCM3 1950 aa13.63□□□□□ -0.23
CHAF1A-201ENST00000301280 GTF3C1Q12789 2109 aa13.63□□□□□ -0.23
CHAF1A-201ENST00000301280 OR14I1A6ND48 311 aa13.63□□□□□ -0.23
CHAF1A-201ENST00000301280 MSGN1A6NI15 193 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms