RNA–Protein interactions for RNA: ENST00000300302.9

HERPUD1-201, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERPUD1, Length 1,862 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-201ENST00000300302 SH3BGRL2Q9UJC5 107 aa13.52□□□□□ -0.25
HERPUD1-201ENST00000300302 PIEZO2Q9H5I5 2752 aa13.51□□□□□ -0.25
HERPUD1-201ENST00000300302 A0A1W2PP11 408 aa13.51□□□□□ -0.25
HERPUD1-201ENST00000300302 ZNF35P13682 527 aa13.51□□□□□ -0.25
HERPUD1-201ENST00000300302 SELEP16581 610 aa13.51□□□□□ -0.25
HERPUD1-201ENST00000300302 CPT2P23786 658 aa13.51□□□□□ -0.25
HERPUD1-201ENST00000300302 CASP6P55212 293 aa13.51□□□□□ -0.25
HERPUD1-201ENST00000300302 GUCA2AQ02747 115 aa13.51□□□□□ -0.25
HERPUD1-201ENST00000300302 PDZK1IP1Q13113 114 aa13.51□□□□□ -0.25
HERPUD1-201ENST00000300302 RSBN1Q5VWQ0 802 aaPredicted RBP13.51□□□□□ -0.25
HERPUD1-201ENST00000300302 C1orf174Q8IYL3 243 aa13.51□□□□□ -0.25
HERPUD1-201ENST00000300302 BHLHE23Q8NDY6 225 aa13.51□□□□□ -0.25
HERPUD1-201ENST00000300302 PXT1Q8NFP0 134 aa13.51□□□□□ -0.25
HERPUD1-201ENST00000300302 OR5A2Q8NGI9 324 aa13.51□□□□□ -0.25
HERPUD1-201ENST00000300302 OR1J1Q8NGS3 322 aa13.51□□□□□ -0.25
HERPUD1-201ENST00000300302 CREB3L1Q96BA8 519 aa13.51□□□□□ -0.25
HERPUD1-201ENST00000300302 RAB3CQ96E17 227 aa13.51□□□□□ -0.25
HERPUD1-201ENST00000300302 SEH1LQ96EE3 360 aa13.51□□□□□ -0.25
HERPUD1-201ENST00000300302 NICN1Q9BSH3 213 aa13.51□□□□□ -0.25
HERPUD1-201ENST00000300302 SELENOIQ9C0D9 397 aa13.51□□□□□ -0.25
HERPUD1-201ENST00000300302 OR2J1Q9GZK6 312 aa13.51□□□□□ -0.25
HERPUD1-201ENST00000300302 ZMAT3Q9HA38 289 aaKnown RBP13.51□□□□□ -0.25
HERPUD1-201ENST00000300302 ZZEF1O43149 2961 aa13.51□□□□□ -0.25
HERPUD1-201ENST00000300302 PQLC2LA1A4F0 135 aa13.5□□□□□ -0.25
HERPUD1-201ENST00000300302 TMEM235A6NFC5 223 aa13.5□□□□□ -0.25
HERPUD1-201ENST00000300302 SPRY1O43609 319 aaPredicted RBP13.5□□□□□ -0.25
HERPUD1-201ENST00000300302 PLATP00750 562 aa13.5□□□□□ -0.25
HERPUD1-201ENST00000300302 MT-ND4P03905 459 aa13.5□□□□□ -0.25
HERPUD1-201ENST00000300302 HNRNPCP07910 306 aaKnown RBP eCLIP13.5□□□□□ -0.25
HERPUD1-201ENST00000300302 MELTFP08582 738 aa13.5□□□□□ -0.25
HERPUD1-201ENST00000300302 GTF2F2P13984 249 aa13.5□□□□□ -0.25
HERPUD1-201ENST00000300302 RAC2P15153 192 aa13.5□□□□□ -0.25
HERPUD1-201ENST00000300302 BTCP35070 178 aa13.5□□□□□ -0.25
HERPUD1-201ENST00000300302 PLA1AQ53H76 456 aa13.5□□□□□ -0.25
HERPUD1-201ENST00000300302 OR2T2Q6IF00 324 aa13.5□□□□□ -0.25
HERPUD1-201ENST00000300302 ASCL4Q6XD76 172 aa13.5□□□□□ -0.25
HERPUD1-201ENST00000300302 FAM89BQ8N5H3 189 aa13.5□□□□□ -0.25
HERPUD1-201ENST00000300302 ZSCAN4Q8NAM6 433 aaPredicted RBP13.5□□□□□ -0.25
HERPUD1-201ENST00000300302 OR10K1Q8NGX5 313 aa13.5□□□□□ -0.25
HERPUD1-201ENST00000300302 CMBLQ96DG6 245 aa13.5□□□□□ -0.25
HERPUD1-201ENST00000300302 CCDC120Q96HB5 630 aa13.5□□□□□ -0.25
HERPUD1-201ENST00000300302 USB1Q9BQ65 265 aaKnown RBP13.5□□□□□ -0.25
HERPUD1-201ENST00000300302 TM2D1Q9BX74 207 aa13.5□□□□□ -0.25
HERPUD1-201ENST00000300302 BCL2L14Q9BZR8 327 aa13.5□□□□□ -0.25
HERPUD1-201ENST00000300302 HRASLSQ9HDD0 168 aa13.5□□□□□ -0.25
HERPUD1-201ENST00000300302 ELOVL5Q9NYP7 299 aa13.5□□□□□ -0.25
HERPUD1-201ENST00000300302 MYO7BQ6PIF6 2116 aa13.5□□□□□ -0.25
HERPUD1-201ENST00000300302 IGHV1-18A0A0C4DH31 117 aa13.5□□□□□ -0.25
HERPUD1-201ENST00000300302 BOLA2-SMG1P6H3BVE0 249 aa13.5□□□□□ -0.25
HERPUD1-201ENST00000300302 ANGPTL7O43827 346 aa13.5□□□□□ -0.25
HERPUD1-201ENST00000300302 HTR3BO95264 441 aa13.5□□□□□ -0.25
HERPUD1-201ENST00000300302 GSTP1P09211 210 aaKnown RBP13.5□□□□□ -0.25
HERPUD1-201ENST00000300302 GIFP27352 417 aa13.5□□□□□ -0.25
HERPUD1-201ENST00000300302 LY6DQ14210 128 aa13.5□□□□□ -0.25
HERPUD1-201ENST00000300302 ARL6IP1Q15041 203 aa13.5□□□□□ -0.25
HERPUD1-201ENST00000300302 C3orf36Q3SXR2 165 aa13.5□□□□□ -0.25
HERPUD1-201ENST00000300302 OLFML2AQ68BL7 652 aa13.5□□□□□ -0.25
HERPUD1-201ENST00000300302 TMEM211Q6ICI0 200 aa13.5□□□□□ -0.25
HERPUD1-201ENST00000300302 SLC25A40Q8TBP6 338 aa13.5□□□□□ -0.25
HERPUD1-201ENST00000300302 RNF170Q96K19 258 aa13.5□□□□□ -0.25
HERPUD1-201ENST00000300302 MARVELD1Q9BSK0 173 aa13.5□□□□□ -0.25
HERPUD1-201ENST00000300302 CACNG6Q9BXT2 260 aa13.5□□□□□ -0.25
HERPUD1-201ENST00000300302 IL36GQ9NZH8 169 aa13.5□□□□□ -0.25
HERPUD1-201ENST00000300302 A0A0A6YYD4 124 aa13.49□□□□□ -0.25
HERPUD1-201ENST00000300302 OR5B21A6NL26 309 aa13.49□□□□□ -0.25
HERPUD1-201ENST00000300302 SOCS1O15524 211 aa13.49□□□□□ -0.25
HERPUD1-201ENST00000300302 HIST1H1DP16402 221 aaKnown RBP13.49□□□□□ -0.25
HERPUD1-201ENST00000300302 GNB3P16520 340 aa13.49□□□□□ -0.25
HERPUD1-201ENST00000300302 PPA1Q15181 289 aa13.49□□□□□ -0.25
HERPUD1-201ENST00000300302 GLCCI1Q86VQ1 547 aa13.49□□□□□ -0.25
HERPUD1-201ENST00000300302 ZNF611Q8N823 705 aa13.49□□□□□ -0.25
HERPUD1-201ENST00000300302 OR51F2Q8NH61 342 aa13.49□□□□□ -0.25
HERPUD1-201ENST00000300302 HPSE2Q8WWQ2 592 aa13.49□□□□□ -0.25
HERPUD1-201ENST00000300302 MRPS24Q96EL2 167 aaKnown RBP13.49□□□□□ -0.25
HERPUD1-201ENST00000300302 VKORC1Q9BQB6 163 aa13.49□□□□□ -0.25
HERPUD1-201ENST00000300302 ACTR6Q9GZN1 396 aa13.49□□□□□ -0.25
HERPUD1-201ENST00000300302 ZNF107Q9UII5 783 aaPredicted RBP13.49□□□□□ -0.25
HERPUD1-201ENST00000300302 NOP16Q9Y3C1 178 aaKnown RBP13.49□□□□□ -0.25
HERPUD1-201ENST00000300302 NUBP2Q9Y5Y2 271 aa13.49□□□□□ -0.25
HERPUD1-201ENST00000300302 MEIS3P1A6NDR6 274 aa13.48□□□□□ -0.25
HERPUD1-201ENST00000300302 CYB5AP00167 134 aa13.48□□□□□ -0.25
HERPUD1-201ENST00000300302 GPM6AP51674 278 aa13.48□□□□□ -0.25
HERPUD1-201ENST00000300302 TAS2R19P59542 299 aa13.48□□□□□ -0.25
HERPUD1-201ENST00000300302 DRAXINQ8NBI3 349 aaPredicted RBP13.48□□□□□ -0.25
HERPUD1-201ENST00000300302 OR5P3Q8WZ94 311 aa13.48□□□□□ -0.25
HERPUD1-201ENST00000300302 RND1Q92730 232 aa13.48□□□□□ -0.25
HERPUD1-201ENST00000300302 UPRTQ96BW1 309 aa13.48□□□□□ -0.25
HERPUD1-201ENST00000300302 MCUBQ9NWR8 336 aa13.48□□□□□ -0.25
HERPUD1-201ENST00000300302 IGHV2OR16-5A0A0B4J2B6 119 aa13.48□□□□□ -0.25
HERPUD1-201ENST00000300302 WIPF3A6NGB9 483 aa13.48□□□□□ -0.25
HERPUD1-201ENST00000300302 ZNF732B4DXR9 585 aa13.48□□□□□ -0.25
HERPUD1-201ENST00000300302 TCRBP04435 133 aa13.48□□□□□ -0.25
HERPUD1-201ENST00000300302 AKAIN1P0CW23 69 aa13.48□□□□□ -0.25
HERPUD1-201ENST00000300302 BLVRBP30043 206 aaPredicted RBP13.48□□□□□ -0.25
HERPUD1-201ENST00000300302 RCVRNP35243 200 aa13.48□□□□□ -0.25
HERPUD1-201ENST00000300302 HAAOP46952 286 aa13.48□□□□□ -0.25
HERPUD1-201ENST00000300302 GNG2P59768 71 aa13.48□□□□□ -0.25
HERPUD1-201ENST00000300302 ERVS71-1P61550 626 aa13.48□□□□□ -0.25
HERPUD1-201ENST00000300302 PNLIPRP3Q17RR3 467 aa13.48□□□□□ -0.25
HERPUD1-201ENST00000300302 TRAPPC6BQ86SZ2 158 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms