RNA–Protein interactions for RNA: ENST00000298396.6

SSX3-201, Transcript of SSX family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX3, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-201ENST00000298396 TGFBR2P37173 567 aa4.97□□□□□ -1.61
SSX3-201ENST00000298396 DDOSTP39656 456 aa4.97□□□□□ -1.61
SSX3-201ENST00000298396 EFNA4P52798 201 aa4.97□□□□□ -1.61
SSX3-201ENST00000298396 ATP5J2P56134 94 aa4.97□□□□□ -1.61
SSX3-201ENST00000298396 RIPPLY1Q0D2K3 151 aa4.97□□□□□ -1.61
SSX3-201ENST00000298396 MLLT11Q13015 90 aaPredicted RBP4.97□□□□□ -1.61
SSX3-201ENST00000298396 MRPL28Q13084 256 aaKnown RBP4.97□□□□□ -1.61
SSX3-201ENST00000298396 TPBGQ13641 420 aa4.97□□□□□ -1.61
SSX3-201ENST00000298396 MED22Q15528 200 aa4.97□□□□□ -1.61
SSX3-201ENST00000298396 OR8G1Q15617 311 aa4.97□□□□□ -1.61
SSX3-201ENST00000298396 MPPED2Q15777 294 aa4.97□□□□□ -1.61
SSX3-201ENST00000298396 UBE2V2Q15819 145 aa4.97□□□□□ -1.61
SSX3-201ENST00000298396 TM4SF20Q53R12 229 aa4.97□□□□□ -1.61
SSX3-201ENST00000298396 CEP78Q5JTW2 689 aa4.97□□□□□ -1.61
SSX3-201ENST00000298396 FAM27D1Q5T7N8 215 aa4.97□□□□□ -1.61
SSX3-201ENST00000298396 TMEM244Q5VVB8 128 aa4.97□□□□□ -1.61
SSX3-201ENST00000298396 PRAMEF6Q5VXH4 476 aa4.97□□□□□ -1.61
SSX3-201ENST00000298396 UNQ9370/PRO34162Q6UXP9 181 aa4.97□□□□□ -1.61
SSX3-201ENST00000298396 TMEM91Q6ZNR0 172 aa4.97□□□□□ -1.61
SSX3-201ENST00000298396 ZNF367Q7RTV3 350 aa4.97□□□□□ -1.61
SSX3-201ENST00000298396 COMMD2Q86X83 199 aa4.97□□□□□ -1.61
SSX3-201ENST00000298396 PHC2Q8IXK0 858 aa4.97□□□□□ -1.61
SSX3-201ENST00000298396 ZNF525Q8N782 197 aa4.97□□□□□ -1.61
SSX3-201ENST00000298396 ZNF676Q8N7Q3 588 aa4.97□□□□□ -1.61
SSX3-201ENST00000298396 CSNK2A3Q8NEV1 391 aa4.97□□□□□ -1.61
SSX3-201ENST00000298396 SEMA6DQ8NFY4 1073 aa4.97□□□□□ -1.61
SSX3-201ENST00000298396 OR51A2Q8NGJ7 313 aa4.97□□□□□ -1.61
SSX3-201ENST00000298396 OR13G1Q8NGZ3 307 aa4.97□□□□□ -1.61
SSX3-201ENST00000298396 OR5P3Q8WZ94 311 aa4.97□□□□□ -1.61
SSX3-201ENST00000298396 PIGCQ92535 297 aa4.97□□□□□ -1.61
SSX3-201ENST00000298396 PIGTQ969N2 578 aa4.97□□□□□ -1.61
SSX3-201ENST00000298396 MUL1Q969V5 352 aa4.97□□□□□ -1.61
SSX3-201ENST00000298396 FGGYQ96C11 551 aa4.97□□□□□ -1.61
SSX3-201ENST00000298396 OR2V2Q96R30 315 aa4.97□□□□□ -1.61
SSX3-201ENST00000298396 OR14A2Q96R54 314 aa4.97□□□□□ -1.61
SSX3-201ENST00000298396 NR1H4Q96RI1 486 aaPredicted RBP4.97□□□□□ -1.61
SSX3-201ENST00000298396 MGLLQ99685 303 aa4.97□□□□□ -1.61
SSX3-201ENST00000298396 NKX3-1Q99801 234 aaPredicted RBP4.97□□□□□ -1.61
SSX3-201ENST00000298396 ADAT1Q9BUB4 502 aaKnown RBP4.97□□□□□ -1.61
SSX3-201ENST00000298396 PAPOLGQ9BWT3 736 aaKnown RBP4.97□□□□□ -1.61
SSX3-201ENST00000298396 CHST5Q9GZS9 411 aa4.97□□□□□ -1.61
SSX3-201ENST00000298396 TLNRD1Q9H1K6 362 aa4.97□□□□□ -1.61
SSX3-201ENST00000298396 CXorf56Q9H5V9 222 aa4.97□□□□□ -1.61
SSX3-201ENST00000298396 GCM1Q9NP62 436 aa4.97□□□□□ -1.61
SSX3-201ENST00000298396 ISYNA1Q9NPH2 558 aa4.97□□□□□ -1.61
SSX3-201ENST00000298396 GPR173Q9NS66 373 aa4.97□□□□□ -1.61
SSX3-201ENST00000298396 CYSLTR2Q9NS75 346 aa4.97□□□□□ -1.61
SSX3-201ENST00000298396 ZNF275Q9NSD4 429 aaPredicted RBP4.97□□□□□ -1.61
SSX3-201ENST00000298396 TMEM100Q9NV29 134 aa4.97□□□□□ -1.61
SSX3-201ENST00000298396 CHCHD3Q9NX63 227 aaKnown RBP4.97□□□□□ -1.61
SSX3-201ENST00000298396 TREM2Q9NZC2 230 aa4.97□□□□□ -1.61
SSX3-201ENST00000298396 HHLA2Q9UM44 414 aa4.97□□□□□ -1.61
SSX3-201ENST00000298396 TRAV8-7A0A075B6U6 113 aa4.96□□□□□ -1.62
SSX3-201ENST00000298396 IGHV4-30-2A0A087WSY4 118 aa4.96□□□□□ -1.62
SSX3-201ENST00000298396 PLSCR5A0PG75 271 aa4.96□□□□□ -1.62
SSX3-201ENST00000298396 PQLC2LA1A4F0 135 aa4.96□□□□□ -1.62
SSX3-201ENST00000298396 VSTM5A8MXK1 200 aa4.96□□□□□ -1.62
SSX3-201ENST00000298396 VWC2LB2RUY7 222 aa4.96□□□□□ -1.62
SSX3-201ENST00000298396 WNT9BO14905 357 aa4.96□□□□□ -1.62
SSX3-201ENST00000298396 SSX4O60224 188 aa4.96□□□□□ -1.62
SSX3-201ENST00000298396 NRASP01111 189 aa4.96□□□□□ -1.62
SSX3-201ENST00000298396 HSMCR30P0CW71 290 aa4.96□□□□□ -1.62
SSX3-201ENST00000298396 MED14OSP0DP75 135 aa4.96□□□□□ -1.62
SSX3-201ENST00000298396 DAOP14920 347 aa4.96□□□□□ -1.62
SSX3-201ENST00000298396 IGFBP3P17936 291 aaPredicted RBP4.96□□□□□ -1.62
SSX3-201ENST00000298396 EGR1P18146 543 aa4.96□□□□□ -1.62
SSX3-201ENST00000298396 CRYBB2P43320 205 aa4.96□□□□□ -1.62
SSX3-201ENST00000298396 SOX2P48431 317 aa4.96□□□□□ -1.62
SSX3-201ENST00000298396 GPM6AP51674 278 aa4.96□□□□□ -1.62
SSX3-201ENST00000298396 TAS2R43P59537 309 aa4.96□□□□□ -1.62
SSX3-201ENST00000298396 SELENOVP59797 346 aa4.96□□□□□ -1.62
SSX3-201ENST00000298396 TNFAIP6P98066 277 aaPredicted RBP4.96□□□□□ -1.62
SSX3-201ENST00000298396 FABP5Q01469 135 aa4.96□□□□□ -1.62
SSX3-201ENST00000298396 ZNF154Q13106 437 aa4.96□□□□□ -1.62
SSX3-201ENST00000298396 GPR50Q13585 617 aa4.96□□□□□ -1.62
SSX3-201ENST00000298396 RIN1Q13671 783 aa4.96□□□□□ -1.62
SSX3-201ENST00000298396 NEDD8Q15843 81 aa4.96□□□□□ -1.62
SSX3-201ENST00000298396 PCGF3Q3KNV8 242 aa4.96□□□□□ -1.62
SSX3-201ENST00000298396 ARMCX4Q5H9R4 360 aa4.96□□□□□ -1.62
SSX3-201ENST00000298396 FAM76BQ5HYJ3 339 aa4.96□□□□□ -1.62
SSX3-201ENST00000298396 Q5PR19 223 aa4.96□□□□□ -1.62
SSX3-201ENST00000298396 FAM201AQ5SY85 155 aa4.96□□□□□ -1.62
SSX3-201ENST00000298396 CLVS2Q5SYC1 327 aa4.96□□□□□ -1.62
SSX3-201ENST00000298396 SYT6Q5T7P8 510 aaPredicted RBP4.96□□□□□ -1.62
SSX3-201ENST00000298396 ZNF826PQ6ZT77 177 aa4.96□□□□□ -1.62
SSX3-201ENST00000298396 KCTD8Q6ZWB6 473 aa4.96□□□□□ -1.62
SSX3-201ENST00000298396 MOB3CQ70IA8 216 aa4.96□□□□□ -1.62
SSX3-201ENST00000298396 UTS2BQ765I0 119 aa4.96□□□□□ -1.62
SSX3-201ENST00000298396 MOGAT3Q86VF5 341 aa4.96□□□□□ -1.62
SSX3-201ENST00000298396 LYPD6Q86Y78 171 aa4.96□□□□□ -1.62
SSX3-201ENST00000298396 LRRC75A-AS1Q8N1F1 130 aa4.96□□□□□ -1.62
SSX3-201ENST00000298396 PARP16Q8N5Y8 322 aa4.96□□□□□ -1.62
SSX3-201ENST00000298396 WFDC11Q8NEX6 87 aa4.96□□□□□ -1.62
SSX3-201ENST00000298396 TSPAN14Q8NG11 270 aa4.96□□□□□ -1.62
SSX3-201ENST00000298396 OR1M1Q8NGA1 313 aa4.96□□□□□ -1.62
SSX3-201ENST00000298396 OR13C3Q8NGS6 347 aa4.96□□□□□ -1.62
SSX3-201ENST00000298396 ZNF420Q8TAQ5 688 aaPredicted RBP4.96□□□□□ -1.62
SSX3-201ENST00000298396 Q8TCH9 128 aa4.96□□□□□ -1.62
SSX3-201ENST00000298396 HAVCR2Q8TDQ0 301 aa4.96□□□□□ -1.62
SSX3-201ENST00000298396 NPRL2Q8WTW4 380 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms