RNA–Protein interactions for RNA: ENST00000296682.3

PRDM9-201, Transcript of PR/SET domain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM9, Length 3,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9-201ENST00000296682 DTX1Q86Y01 620 aa8.13□□□□□ -1.11
PRDM9-201ENST00000296682 IL1F10Q8WWZ1 152 aa8.13□□□□□ -1.11
PRDM9-201ENST00000296682 MARVELD3Q96A59 401 aa8.13□□□□□ -1.11
PRDM9-201ENST00000296682 LYZL4Q96KX0 146 aa8.13□□□□□ -1.11
PRDM9-201ENST00000296682 SLC25A21Q9BQT8 299 aaPredicted RBP8.13□□□□□ -1.11
PRDM9-201ENST00000296682 SHPKQ9UHJ6 478 aa8.13□□□□□ -1.11
PRDM9-201ENST00000296682 TIMM10BQ9Y5J6 103 aa8.13□□□□□ -1.11
PRDM9-201ENST00000296682 CSAG2Q9Y5P2 127 aa8.13□□□□□ -1.11
PRDM9-201ENST00000296682 LOC102723996A0A087X1L8 192 aa8.13□□□□□ -1.11
PRDM9-201ENST00000296682 TRAV39A0A0B4J263 110 aa8.13□□□□□ -1.11
PRDM9-201ENST00000296682 HS3ST1O14792 307 aa8.13□□□□□ -1.11
PRDM9-201ENST00000296682 ISG15P05161 165 aa8.13□□□□□ -1.11
PRDM9-201ENST00000296682 IGFBP3P17936 291 aaPredicted RBP8.13□□□□□ -1.11
PRDM9-201ENST00000296682 ZNF92Q03936 586 aa8.13□□□□□ -1.11
PRDM9-201ENST00000296682 TMEM229BQ8NBD8 167 aa8.13□□□□□ -1.11
PRDM9-201ENST00000296682 OR2M7Q8NG81 312 aa8.13□□□□□ -1.11
PRDM9-201ENST00000296682 ZNF2Q9BSG1 426 aaPredicted RBP8.13□□□□□ -1.11
PRDM9-201ENST00000296682 SLC17A5Q9NRA2 495 aa8.13□□□□□ -1.11
PRDM9-201ENST00000296682 OPN4Q9UHM6 478 aa8.13□□□□□ -1.11
PRDM9-201ENST00000296682 C14orf166Q9Y224 244 aaKnown RBP8.13□□□□□ -1.11
PRDM9-201ENST00000296682 LSM5Q9Y4Y9 91 aaKnown RBP8.13□□□□□ -1.11
PRDM9-201ENST00000296682 LOC390937A0A1W2PQ73 354 aa8.13□□□□□ -1.11
PRDM9-201ENST00000296682 G3V3Q6 166 aa8.13□□□□□ -1.11
PRDM9-201ENST00000296682 AGPAT2O15120 278 aa8.13□□□□□ -1.11
PRDM9-201ENST00000296682 TPOP07202 933 aa8.13□□□□□ -1.11
PRDM9-201ENST00000296682 GIPP09681 153 aaPredicted RBP8.13□□□□□ -1.11
PRDM9-201ENST00000296682 RBP2P50120 134 aa8.13□□□□□ -1.11
PRDM9-201ENST00000296682 MEOX1P50221 254 aa8.13□□□□□ -1.11
PRDM9-201ENST00000296682 TMEM50BP56557 158 aa8.13□□□□□ -1.11
PRDM9-201ENST00000296682 RAB1AP62820 205 aa8.13□□□□□ -1.11
PRDM9-201ENST00000296682 ECH1Q13011 328 aa8.13□□□□□ -1.11
PRDM9-201ENST00000296682 HIKESHIQ53FT3 197 aa8.13□□□□□ -1.11
PRDM9-201ENST00000296682 GSG1LQ6UXU4 331 aa8.13□□□□□ -1.11
PRDM9-201ENST00000296682 TMEM200AQ86VY9 491 aa8.13□□□□□ -1.11
PRDM9-201ENST00000296682 OR13C8Q8NGS7 320 aa8.13□□□□□ -1.11
PRDM9-201ENST00000296682 OR14K1Q8NGZ2 314 aa8.13□□□□□ -1.11
PRDM9-201ENST00000296682 CPT1CQ8TCG5 803 aa8.13□□□□□ -1.11
PRDM9-201ENST00000296682 FBXW5Q969U6 566 aa8.13□□□□□ -1.11
PRDM9-201ENST00000296682 APH1AQ96BI3 265 aa8.13□□□□□ -1.11
PRDM9-201ENST00000296682 GPR137Q96N19 417 aa8.13□□□□□ -1.11
PRDM9-201ENST00000296682 VRK1Q99986 396 aaPredicted RBP8.13□□□□□ -1.11
PRDM9-201ENST00000296682 METTL9Q9H1A3 318 aa8.13□□□□□ -1.11
PRDM9-201ENST00000296682 SH3BGRL2Q9UJC5 107 aa8.13□□□□□ -1.11
PRDM9-201ENST00000296682 ST3GAL6Q9Y274 331 aa8.13□□□□□ -1.11
PRDM9-201ENST00000296682 MED13LQ71F56 2210 aa8.12□□□□□ -1.11
PRDM9-201ENST00000296682 MCRIP1C9JLW8 97 aa8.12□□□□□ -1.11
PRDM9-201ENST00000296682 GEMIN2O14893 280 aaKnown RBP8.12□□□□□ -1.11
PRDM9-201ENST00000296682 IGHEP01854 428 aa8.12□□□□□ -1.11
PRDM9-201ENST00000296682 CHRM2P08172 466 aa8.12□□□□□ -1.11
PRDM9-201ENST00000296682 RPA2P15927 270 aa8.12□□□□□ -1.11
PRDM9-201ENST00000296682 RBMXP38159 391 aaKnown RBP8.12□□□□□ -1.11
PRDM9-201ENST00000296682 HAAOP46952 286 aa8.12□□□□□ -1.11
PRDM9-201ENST00000296682 GPM6AP51674 278 aa8.12□□□□□ -1.11
PRDM9-201ENST00000296682 DEFA5Q01523 94 aa8.12□□□□□ -1.11
PRDM9-201ENST00000296682 SLC10A1Q14973 349 aa8.12□□□□□ -1.11
PRDM9-201ENST00000296682 Q6ZSR3 168 aa8.12□□□□□ -1.11
PRDM9-201ENST00000296682 TMEM251Q8N6I4 163 aa8.12□□□□□ -1.11
PRDM9-201ENST00000296682 ADPRHL1Q8NDY3 354 aa8.12□□□□□ -1.11
PRDM9-201ENST00000296682 RDH5Q92781 318 aa8.12□□□□□ -1.11
PRDM9-201ENST00000296682 GSX2Q9BZM3 304 aa8.12□□□□□ -1.11
PRDM9-201ENST00000296682 PIPOXQ9P0Z9 390 aa8.12□□□□□ -1.11
PRDM9-201ENST00000296682 MBD2Q9UBB5 411 aa8.12□□□□□ -1.11
PRDM9-201ENST00000296682 ZNF587BE7ETH6 402 aa8.12□□□□□ -1.11
PRDM9-201ENST00000296682 HPP00738 406 aa8.12□□□□□ -1.11
PRDM9-201ENST00000296682 NGFP01138 241 aa8.12□□□□□ -1.11
PRDM9-201ENST00000296682 APOC1P02654 83 aa8.12□□□□□ -1.11
PRDM9-201ENST00000296682 APOC3P02656 99 aa8.12□□□□□ -1.11
PRDM9-201ENST00000296682 GABRA1P14867 456 aa8.12□□□□□ -1.11
PRDM9-201ENST00000296682 ZNF16P17020 682 aaPredicted RBP8.12□□□□□ -1.11
PRDM9-201ENST00000296682 FSTP19883 344 aa8.12□□□□□ -1.11
PRDM9-201ENST00000296682 CPT2P23786 658 aa8.12□□□□□ -1.11
PRDM9-201ENST00000296682 IDH3GP51553 393 aaPredicted RBP8.12□□□□□ -1.11
PRDM9-201ENST00000296682 OR56B2PQ8NGI1 322 aa8.12□□□□□ -1.11
PRDM9-201ENST00000296682 ZNF488Q96MN9 340 aa8.12□□□□□ -1.11
PRDM9-201ENST00000296682 ZNF75AQ96N20 296 aa8.12□□□□□ -1.11
PRDM9-201ENST00000296682 PFDN2Q9UHV9 154 aa8.12□□□□□ -1.11
PRDM9-201ENST00000296682 ABCA4P78363 2273 aa8.12□□□□□ -1.11
PRDM9-201ENST00000296682 A0A0A6YYD4 124 aa8.11□□□□□ -1.11
PRDM9-201ENST00000296682 SNRPGP15A8MWD9 76 aa8.11□□□□□ -1.11
PRDM9-201ENST00000296682 CD46P15529 392 aa8.11□□□□□ -1.11
PRDM9-201ENST00000296682 CNR1P21554 472 aa8.11□□□□□ -1.11
PRDM9-201ENST00000296682 SSBP1Q04837 148 aaKnown RBP8.11□□□□□ -1.11
PRDM9-201ENST00000296682 CLPPQ16740 277 aaPredicted RBP8.11□□□□□ -1.11
PRDM9-201ENST00000296682 C1orf100Q5SVJ3 147 aa8.11□□□□□ -1.11
PRDM9-201ENST00000296682 ZNF529Q6P280 563 aa8.11□□□□□ -1.11
PRDM9-201ENST00000296682 TERB2Q8NHR7 220 aa8.11□□□□□ -1.11
PRDM9-201ENST00000296682 RNASE11Q8TAA1 199 aaKnown RBP8.11□□□□□ -1.11
PRDM9-201ENST00000296682 TTTY12Q9BZ98 90 aa8.11□□□□□ -1.11
PRDM9-201ENST00000296682 SCPEP1Q9HB40 452 aa8.11□□□□□ -1.11
PRDM9-201ENST00000296682 GPR35Q9HC97 309 aa8.11□□□□□ -1.11
PRDM9-201ENST00000296682 NPDC1Q9NQX5 325 aaPredicted RBP8.11□□□□□ -1.11
PRDM9-201ENST00000296682 TMEM38BQ9NVV0 291 aa8.11□□□□□ -1.11
PRDM9-201ENST00000296682 SPTBN1Q01082 2364 aaKnown RBP8.11□□□□□ -1.11
PRDM9-201ENST00000296682 A0A0A6YYH2 397 aa8.11□□□□□ -1.11
PRDM9-201ENST00000296682 A6NJ64 397 aa8.11□□□□□ -1.11
PRDM9-201ENST00000296682 C19orf67A6NJJ6 358 aa8.11□□□□□ -1.11
PRDM9-201ENST00000296682 B4E171 279 aa8.11□□□□□ -1.11
PRDM9-201ENST00000296682 LDLRAD4O15165 306 aa8.11□□□□□ -1.11
PRDM9-201ENST00000296682 CD59P13987 128 aa8.11□□□□□ -1.11
PRDM9-201ENST00000296682 ZNF17P17021 662 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms