RNA–Protein interactions for RNA: ENST00000296043.6

SHROOM3-201, Transcript of shroom family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM3, Length 11,020 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-201ENST00000296043 PRTGQ2VWP7 1150 aa10.62□□□□□ -0.71
SHROOM3-201ENST00000296043 ZNF362Q5T0B9 420 aaPredicted RBP10.62□□□□□ -0.71
SHROOM3-201ENST00000296043 TMED7-TICAM2A0A0A6YYA0 188 aa10.62□□□□□ -0.71
SHROOM3-201ENST00000296043 LDLRAD4O15165 306 aa10.62□□□□□ -0.71
SHROOM3-201ENST00000296043 NUDT3O95989 172 aa10.62□□□□□ -0.71
SHROOM3-201ENST00000296043 BRS3P32247 399 aa10.62□□□□□ -0.71
SHROOM3-201ENST00000296043 DOK3Q7L591 496 aa10.62□□□□□ -0.71
SHROOM3-201ENST00000296043 CALHM1Q8IU99 346 aa10.62□□□□□ -0.71
SHROOM3-201ENST00000296043 ANAPC16Q96DE5 110 aa10.62□□□□□ -0.71
SHROOM3-201ENST00000296043 TMED7Q9Y3B3 224 aa10.62□□□□□ -0.71
SHROOM3-201ENST00000296043 CYBAP13498 195 aa10.62□□□□□ -0.71
SHROOM3-201ENST00000296043 KLK2P20151 261 aa10.62□□□□□ -0.71
SHROOM3-201ENST00000296043 RPS27P42677 84 aaKnown RBP10.62□□□□□ -0.71
SHROOM3-201ENST00000296043 RTL8BQ17RB0 113 aa10.62□□□□□ -0.71
SHROOM3-201ENST00000296043 BSXQ3C1V8 233 aa10.62□□□□□ -0.71
SHROOM3-201ENST00000296043 ZNF628Q5EBL2 1059 aa10.62□□□□□ -0.71
SHROOM3-201ENST00000296043 RDH5Q92781 318 aa10.62□□□□□ -0.71
SHROOM3-201ENST00000296043 SLC35A4Q96G79 324 aa10.62□□□□□ -0.71
SHROOM3-201ENST00000296043 CITED1Q99966 193 aa10.62□□□□□ -0.71
SHROOM3-201ENST00000296043 ANGPTL4Q9BY76 406 aa10.62□□□□□ -0.71
SHROOM3-201ENST00000296043 MCTS1Q9ULC4 181 aaKnown RBP10.62□□□□□ -0.71
SHROOM3-201ENST00000296043 M0R3E3 92 aa10.61□□□□□ -0.71
SHROOM3-201ENST00000296043 MFNGO00587 321 aa10.61□□□□□ -0.71
SHROOM3-201ENST00000296043 PVRP15151 417 aa10.61□□□□□ -0.71
SHROOM3-201ENST00000296043 NPBWR2P48146 333 aa10.61□□□□□ -0.71
SHROOM3-201ENST00000296043 DYNLT3P51808 116 aa10.61□□□□□ -0.71
SHROOM3-201ENST00000296043 C15orf39Q6ZRI6 1047 aa10.61□□□□□ -0.71
SHROOM3-201ENST00000296043 FAM169BQ8N8A8 192 aa10.61□□□□□ -0.71
SHROOM3-201ENST00000296043 NUP37Q8NFH4 326 aa10.61□□□□□ -0.71
SHROOM3-201ENST00000296043 IRF7Q92985 503 aa10.61□□□□□ -0.71
SHROOM3-201ENST00000296043 WDFY2Q96P53 400 aa10.61□□□□□ -0.71
SHROOM3-201ENST00000296043 ROS1P08922 2347 aa10.61□□□□□ -0.71
SHROOM3-201ENST00000296043 PRAMEF26H0Y7S4 382 aa10.61□□□□□ -0.71
SHROOM3-201ENST00000296043 SIRPB1O00241 398 aa10.61□□□□□ -0.71
SHROOM3-201ENST00000296043 RCC1P18754 421 aaPredicted RBP10.61□□□□□ -0.71
SHROOM3-201ENST00000296043 TMEM33P57088 247 aa10.61□□□□□ -0.71
SHROOM3-201ENST00000296043 FAHD2BQ6P2I3 314 aaPredicted RBP10.61□□□□□ -0.71
SHROOM3-201ENST00000296043 ZDHHC22Q8N966 263 aa10.61□□□□□ -0.71
SHROOM3-201ENST00000296043 OR4B1Q8NGF8 309 aa10.61□□□□□ -0.71
SHROOM3-201ENST00000296043 ABHD16AO95870 558 aa10.61□□□□□ -0.71
SHROOM3-201ENST00000296043 RELQ04864 619 aaPredicted RBP10.61□□□□□ -0.71
SHROOM3-201ENST00000296043 GAMTQ14353 236 aa10.61□□□□□ -0.71
SHROOM3-201ENST00000296043 ACY3Q96HD9 319 aa10.61□□□□□ -0.71
SHROOM3-201ENST00000296043 ARF6P62330 175 aa10.61□□□□□ -0.71
SHROOM3-201ENST00000296043 FKBP1BP68106 108 aa10.61□□□□□ -0.71
SHROOM3-201ENST00000296043 ISG20Q96AZ6 181 aaKnown RBP10.61□□□□□ -0.71
SHROOM3-201ENST00000296043 OR6C1Q96RD1 312 aa10.61□□□□□ -0.71
SHROOM3-201ENST00000296043 P4HTMQ9NXG6 502 aa10.61□□□□□ -0.71
SHROOM3-201ENST00000296043 UBR2Q8IWV8 1755 aa10.61□□□□□ -0.71
SHROOM3-201ENST00000296043 FAHD1Q6P587 224 aa10.61□□□□□ -0.71
SHROOM3-201ENST00000296043 GRASPQ7Z6J2 395 aaPredicted RBP10.61□□□□□ -0.71
SHROOM3-201ENST00000296043 KCNK7Q9Y2U2 307 aa10.61□□□□□ -0.71
SHROOM3-201ENST00000296043 TAPBPO15533 448 aa10.61□□□□□ -0.71
SHROOM3-201ENST00000296043 OR2A5Q96R48 311 aa10.61□□□□□ -0.71
SHROOM3-201ENST00000296043 FTSJ1Q9UET6 329 aa10.61□□□□□ -0.71
SHROOM3-201ENST00000296043 LRRC3CA6NJW4 275 aa10.61□□□□□ -0.71
SHROOM3-201ENST00000296043 PTP4A3O75365 173 aa10.61□□□□□ -0.71
SHROOM3-201ENST00000296043 RHBDD2Q6NTF9 364 aa10.61□□□□□ -0.71
SHROOM3-201ENST00000296043 SYT11Q9BT88 431 aa10.61□□□□□ -0.71
SHROOM3-201ENST00000296043 OR2W5A6NFC9 320 aa10.61□□□□□ -0.71
SHROOM3-201ENST00000296043 MRPL37Q9BZE1 423 aaKnown RBP10.61□□□□□ -0.71
SHROOM3-201ENST00000296043 PNRC1Q12796 327 aaPredicted RBP10.6□□□□□ -0.71
SHROOM3-201ENST00000296043 LDLRAD3Q86YD5 345 aa10.6□□□□□ -0.71
SHROOM3-201ENST00000296043 TUBGCP6Q96RT7 1819 aa10.6□□□□□ -0.71
SHROOM3-201ENST00000296043 EN2P19622 333 aaPredicted RBP10.6□□□□□ -0.71
SHROOM3-201ENST00000296043 CST5P28325 142 aaPredicted RBP10.6□□□□□ -0.71
SHROOM3-201ENST00000296043 EPHA8P29322 1005 aaPredicted RBP10.6□□□□□ -0.71
SHROOM3-201ENST00000296043 OR10X1Q8NGY0 326 aa10.6□□□□□ -0.71
SHROOM3-201ENST00000296043 WNK1Q9H4A3 2382 aa10.6□□□□□ -0.71
SHROOM3-201ENST00000296043 FOCADQ5VW36 1801 aa10.6□□□□□ -0.71
SHROOM3-201ENST00000296043 TCRBV21S2A2A0A5A6 115 aa10.6□□□□□ -0.71
SHROOM3-201ENST00000296043 SLC25A5P05141 298 aaKnown RBP10.6□□□□□ -0.71
SHROOM3-201ENST00000296043 MANBALQ9NQG1 85 aa10.6□□□□□ -0.71
SHROOM3-201ENST00000296043 SLCO1C1Q9NYB5 712 aa10.6□□□□□ -0.71
SHROOM3-201ENST00000296043 DOK5Q9P104 306 aa10.6□□□□□ -0.71
SHROOM3-201ENST00000296043 TAAR2Q9P1P5 351 aa10.6□□□□□ -0.71
SHROOM3-201ENST00000296043 RLN3Q8WXF3 142 aa10.6□□□□□ -0.71
SHROOM3-201ENST00000296043 H1FXQ92522 213 aaKnown RBP10.6□□□□□ -0.71
SHROOM3-201ENST00000296043 LRRK1Q38SD2 2015 aa10.6□□□□□ -0.71
SHROOM3-201ENST00000296043 TGIF2-C20orf24A0A0A6YYL0 155 aa10.6□□□□□ -0.71
SHROOM3-201ENST00000296043 GDF1P27539 372 aa10.6□□□□□ -0.71
SHROOM3-201ENST00000296043 TPBGQ13641 420 aa10.6□□□□□ -0.71
SHROOM3-201ENST00000296043 EID2BQ96D98 161 aa10.6□□□□□ -0.71
SHROOM3-201ENST00000296043 KCNK15Q9H427 330 aa10.6□□□□□ -0.71
SHROOM3-201ENST00000296043 CORTO00230 105 aa10.6□□□□□ -0.71
SHROOM3-201ENST00000296043 LMX1BO60663 402 aa10.6□□□□□ -0.71
SHROOM3-201ENST00000296043 GABRA1P14867 456 aa10.6□□□□□ -0.71
SHROOM3-201ENST00000296043 ZNF418Q8TF45 676 aaPredicted RBP10.6□□□□□ -0.71
SHROOM3-201ENST00000296043 CITED2Q99967 270 aaPredicted RBP10.6□□□□□ -0.71
SHROOM3-201ENST00000296043 ELF5Q9UKW6 265 aaPredicted RBP10.6□□□□□ -0.71
SHROOM3-201ENST00000296043 PHF3Q92576 2039 aaKnown RBP10.6□□□□□ -0.71
SHROOM3-201ENST00000296043 OOEPA6NGQ2 149 aa10.6□□□□□ -0.71
SHROOM3-201ENST00000296043 MT-CO3P00414 261 aa10.6□□□□□ -0.71
SHROOM3-201ENST00000296043 FPR2P25090 351 aa10.6□□□□□ -0.71
SHROOM3-201ENST00000296043 TRMT12Q53H54 448 aaKnown RBP10.6□□□□□ -0.71
SHROOM3-201ENST00000296043 SCCPDHQ8NBX0 429 aa10.6□□□□□ -0.71
SHROOM3-201ENST00000296043 ABHD3Q8WU67 409 aa10.6□□□□□ -0.71
SHROOM3-201ENST00000296043 MRPS24Q96EL2 167 aaKnown RBP10.6□□□□□ -0.71
SHROOM3-201ENST00000296043 SLC5A6Q9Y289 635 aa10.6□□□□□ -0.71
SHROOM3-201ENST00000296043 A0A0J9YY10 115 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms