RNA–Protein interactions for RNA: ENST00000295522.3

CLDN1-201, Transcript of claudin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDN1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1-201ENST00000295522 GAPDHP04406 335 aaKnown RBP9.02□□□□□ -0.97
CLDN1-201ENST00000295522 ERGP11308 486 aa9.02□□□□□ -0.97
CLDN1-201ENST00000295522 OR3A4PP47883 348 aa9.02□□□□□ -0.97
CLDN1-201ENST00000295522 HLA-DRB3P79483 266 aa9.02□□□□□ -0.97
CLDN1-201ENST00000295522 GLO1Q04760 184 aa9.02□□□□□ -0.97
CLDN1-201ENST00000295522 DMWDQ09019 674 aa9.02□□□□□ -0.97
CLDN1-201ENST00000295522 HERPUD1Q15011 391 aa9.02□□□□□ -0.97
CLDN1-201ENST00000295522 RTL6Q6ICC9 239 aa9.02□□□□□ -0.97
CLDN1-201ENST00000295522 FAM166AQ6J272 317 aa9.02□□□□□ -0.97
CLDN1-201ENST00000295522 CARFQ8N187 725 aa9.02□□□□□ -0.97
CLDN1-201ENST00000295522 DTWD2Q8NBA8 298 aa9.02□□□□□ -0.97
CLDN1-201ENST00000295522 TAAR8Q969N4 342 aa9.02□□□□□ -0.97
CLDN1-201ENST00000295522 ADAT3Q96EY9 351 aaPredicted RBP9.02□□□□□ -0.97
CLDN1-201ENST00000295522 CCDC74BQ96LY2 380 aa9.02□□□□□ -0.97
CLDN1-201ENST00000295522 RAB11FIP5Q9BXF6 653 aa9.02□□□□□ -0.97
CLDN1-201ENST00000295522 STRAPQ9Y3F4 350 aaKnown RBP9.02□□□□□ -0.97
CLDN1-201ENST00000295522 CLDN34H7C241 214 aa9.01□□□□□ -0.97
CLDN1-201ENST00000295522 DLEU1O43261 78 aa9.01□□□□□ -0.97
CLDN1-201ENST00000295522 RPLP1P05386 114 aaKnown RBP9.01□□□□□ -0.97
CLDN1-201ENST00000295522 OPRM1P35372 400 aa9.01□□□□□ -0.97
CLDN1-201ENST00000295522 OR3A1P47881 315 aa9.01□□□□□ -0.97
CLDN1-201ENST00000295522 FBXW4P57775 412 aa9.01□□□□□ -0.97
CLDN1-201ENST00000295522 RPS15AP62244 130 aaKnown RBP9.01□□□□□ -0.97
CLDN1-201ENST00000295522 SGCGQ13326 291 aa9.01□□□□□ -0.97
CLDN1-201ENST00000295522 FZD2Q14332 565 aa9.01□□□□□ -0.97
CLDN1-201ENST00000295522 ARSJQ5FYB0 599 aaPredicted RBP9.01□□□□□ -0.97
CLDN1-201ENST00000295522 LYZL2Q7Z4W2 148 aa9.01□□□□□ -0.97
CLDN1-201ENST00000295522 GRASPQ7Z6J2 395 aaPredicted RBP9.01□□□□□ -0.97
CLDN1-201ENST00000295522 HIST1H2AAQ96QV6 131 aa9.01□□□□□ -0.97
CLDN1-201ENST00000295522 LMF2Q9BU23 707 aaKnown RBP9.01□□□□□ -0.97
CLDN1-201ENST00000295522 PLEKHA2Q9HB19 425 aa9.01□□□□□ -0.97
CLDN1-201ENST00000295522 PHPT1Q9NRX4 125 aaPredicted RBP9.01□□□□□ -0.97
CLDN1-201ENST00000295522 MED12Q93074 2177 aa9.01□□□□□ -0.97
CLDN1-201ENST00000295522 IGKV1D-42A0A075B6H8 117 aa9.01□□□□□ -0.97
CLDN1-201ENST00000295522 NSG1A0A0A6YYJ2 146 aa9.01□□□□□ -0.97
CLDN1-201ENST00000295522 BCAT2O15382 392 aaPredicted RBP9.01□□□□□ -0.97
CLDN1-201ENST00000295522 TMEM225BP0DP42 221 aa9.01□□□□□ -0.97
CLDN1-201ENST00000295522 CD33P20138 364 aa9.01□□□□□ -0.97
CLDN1-201ENST00000295522 CTHP32929 405 aa9.01□□□□□ -0.97
CLDN1-201ENST00000295522 APOBEC1P41238 236 aaKnown RBP9.01□□□□□ -0.97
CLDN1-201ENST00000295522 P2RY1P47900 373 aa9.01□□□□□ -0.97
CLDN1-201ENST00000295522 DEFB103AP81534 67 aa9.01□□□□□ -0.97
CLDN1-201ENST00000295522 P2RY6Q15077 328 aa9.01□□□□□ -0.97
CLDN1-201ENST00000295522 MPV17LQ2QL34 196 aa9.01□□□□□ -0.97
CLDN1-201ENST00000295522 PRICKLE4Q2TBC4 344 aa9.01□□□□□ -0.97
CLDN1-201ENST00000295522 C5orf24Q7Z6I8 188 aa9.01□□□□□ -0.97
CLDN1-201ENST00000295522 NKAIN3Q8N8D7 197 aa9.01□□□□□ -0.97
CLDN1-201ENST00000295522 OR5D14Q8NGL3 314 aa9.01□□□□□ -0.97
CLDN1-201ENST00000295522 OR9A4Q8NGU2 314 aa9.01□□□□□ -0.97
CLDN1-201ENST00000295522 OR6X1Q8NH79 312 aa9.01□□□□□ -0.97
CLDN1-201ENST00000295522 OR5R1Q8NH85 324 aa9.01□□□□□ -0.97
CLDN1-201ENST00000295522 OR51E1Q8TCB6 317 aa9.01□□□□□ -0.97
CLDN1-201ENST00000295522 FAAP24Q9BTP7 215 aa9.01□□□□□ -0.97
CLDN1-201ENST00000295522 SLC5A6Q9Y289 635 aa9.01□□□□□ -0.97
CLDN1-201ENST00000295522 INSL6Q9Y581 213 aa9.01□□□□□ -0.97
CLDN1-201ENST00000295522 HEBP2Q9Y5Z4 205 aa9.01□□□□□ -0.97
CLDN1-201ENST00000295522 RANBP2P49792 3224 aaKnown RBP9.01□□□□□ -0.97
CLDN1-201ENST00000295522 A8MVM7 634 aa9.01□□□□□ -0.97
CLDN1-201ENST00000295522 SCDO00767 359 aa9.01□□□□□ -0.97
CLDN1-201ENST00000295522 RAD51DO75771 328 aa9.01□□□□□ -0.97
CLDN1-201ENST00000295522 HIST1H1DP16402 221 aaKnown RBP9.01□□□□□ -0.97
CLDN1-201ENST00000295522 ATP6V0CP27449 155 aa9.01□□□□□ -0.97
CLDN1-201ENST00000295522 S100A7P31151 101 aa9.01□□□□□ -0.97
CLDN1-201ENST00000295522 GLIPR1P48060 266 aa9.01□□□□□ -0.97
CLDN1-201ENST00000295522 FGF8P55075 233 aaPredicted RBP9.01□□□□□ -0.97
CLDN1-201ENST00000295522 PIGPP57054 158 aa9.01□□□□□ -0.97
CLDN1-201ENST00000295522 COL10A1Q03692 680 aa9.01□□□□□ -0.97
CLDN1-201ENST00000295522 TAF9Q16594 264 aa9.01□□□□□ -0.97
CLDN1-201ENST00000295522 TMEM176BQ3YBM2 270 aaPredicted RBP9.01□□□□□ -0.97
CLDN1-201ENST00000295522 TCEAL8Q8IYN2 117 aa9.01□□□□□ -0.97
CLDN1-201ENST00000295522 CMTM1Q8IZ96 169 aa9.01□□□□□ -0.97
CLDN1-201ENST00000295522 MAML2Q8IZL2 1156 aaPredicted RBP9.01□□□□□ -0.97
CLDN1-201ENST00000295522 FAM160A2Q8N612 972 aaPredicted RBP9.01□□□□□ -0.97
CLDN1-201ENST00000295522 RSC1A1Q92681 617 aa9.01□□□□□ -0.97
CLDN1-201ENST00000295522 SUSD2Q9UGT4 822 aa9.01□□□□□ -0.97
CLDN1-201ENST00000295522 HSFX4A0A1B0GTS1 333 aaPredicted RBP9□□□□□ -0.97
CLDN1-201ENST00000295522 HSFX3A0A1B0GWH4 333 aaPredicted RBP9□□□□□ -0.97
CLDN1-201ENST00000295522 HIDE1A8MVS5 230 aa9□□□□□ -0.97
CLDN1-201ENST00000295522 PRRT4C9JH25 899 aa9□□□□□ -0.97
CLDN1-201ENST00000295522 K7EQS6 105 aa9□□□□□ -0.97
CLDN1-201ENST00000295522 SIAH2O43255 324 aa9□□□□□ -0.97
CLDN1-201ENST00000295522 HSPA12AO43301 675 aa9□□□□□ -0.97
CLDN1-201ENST00000295522 KAT7O95251 611 aa9□□□□□ -0.97
CLDN1-201ENST00000295522 HLA-HP01893 362 aa9□□□□□ -0.97
CLDN1-201ENST00000295522 THBS4P35443 961 aa9□□□□□ -0.97
CLDN1-201ENST00000295522 WNT5AP41221 380 aa9□□□□□ -0.97
CLDN1-201ENST00000295522 P2RY2P41231 377 aa9□□□□□ -0.97
CLDN1-201ENST00000295522 TOMM20Q15388 145 aa9□□□□□ -0.97
CLDN1-201ENST00000295522 CD226Q15762 336 aa9□□□□□ -0.97
CLDN1-201ENST00000295522 HIKESHIQ53FT3 197 aa9□□□□□ -0.97
CLDN1-201ENST00000295522 PLAC9Q5JTB6 97 aa9□□□□□ -0.97
CLDN1-201ENST00000295522 WBP2NLQ6ICG8 309 aa9□□□□□ -0.97
CLDN1-201ENST00000295522 OR1P1Q8NH06 330 aa9□□□□□ -0.97
CLDN1-201ENST00000295522 OR52N5Q8NH56 324 aa9□□□□□ -0.97
CLDN1-201ENST00000295522 GPR119Q8TDV5 335 aa9□□□□□ -0.97
CLDN1-201ENST00000295522 EMG1Q92979 244 aaKnown RBP9□□□□□ -0.97
CLDN1-201ENST00000295522 GDE1Q9NZC3 331 aa9□□□□□ -0.97
CLDN1-201ENST00000295522 ZNF107Q9UII5 783 aaPredicted RBP9□□□□□ -0.97
CLDN1-201ENST00000295522 PPP5D1E7EU14 171 aa9□□□□□ -0.97
CLDN1-201ENST00000295522 H0YGG7 62 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms