RNA–Protein interactions for RNA: ENST00000294172.6

NXF1-201, Transcript of nuclear RNA export factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NXF1, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-201ENST00000294172 LIPGQ9Y5X9 500 aa12.17□□□□□ -0.46
NXF1-201ENST00000294172 SPAARA0A1B0GVQ0 90 aa12.16□□□□□ -0.46
NXF1-201ENST00000294172 C9orf170A2RU37 121 aa12.16□□□□□ -0.46
NXF1-201ENST00000294172 RGS11O94810 467 aa12.16□□□□□ -0.46
NXF1-201ENST00000294172 CRYZL1O95825 349 aa12.16□□□□□ -0.46
NXF1-201ENST00000294172 CSTBP04080 98 aaKnown RBP12.16□□□□□ -0.46
NXF1-201ENST00000294172 CCL2P13500 99 aa12.16□□□□□ -0.46
NXF1-201ENST00000294172 PRKACBP22694 351 aa12.16□□□□□ -0.46
NXF1-201ENST00000294172 ZBTB25P24278 435 aa12.16□□□□□ -0.46
NXF1-201ENST00000294172 SNU13P55769 128 aaKnown RBP12.16□□□□□ -0.46
NXF1-201ENST00000294172 GMFBP60983 142 aa12.16□□□□□ -0.46
NXF1-201ENST00000294172 FAM3AP98173 230 aa12.16□□□□□ -0.46
NXF1-201ENST00000294172 TOR2AQ5JU69 321 aa12.16□□□□□ -0.46
NXF1-201ENST00000294172 CSNK2A3Q8NEV1 391 aa12.16□□□□□ -0.46
NXF1-201ENST00000294172 TERB2Q8NHR7 220 aa12.16□□□□□ -0.46
NXF1-201ENST00000294172 C17orf50Q8WW18 174 aa12.16□□□□□ -0.46
NXF1-201ENST00000294172 ST8SIA4Q92187 359 aa12.16□□□□□ -0.46
NXF1-201ENST00000294172 PDCD10Q9BUL8 212 aa12.16□□□□□ -0.46
NXF1-201ENST00000294172 FAM117AQ9C073 453 aa12.16□□□□□ -0.46
NXF1-201ENST00000294172 METTL9Q9H1A3 318 aa12.16□□□□□ -0.46
NXF1-201ENST00000294172 LDAHQ9H6V9 325 aa12.16□□□□□ -0.46
NXF1-201ENST00000294172 PLEKHJ1Q9NW61 149 aa12.16□□□□□ -0.46
NXF1-201ENST00000294172 RPS10-NUDT3A0A1W2PQS6 291 aa12.16□□□□□ -0.46
NXF1-201ENST00000294172 FOXI3A8MTJ6 420 aaPredicted RBP12.16□□□□□ -0.46
NXF1-201ENST00000294172 FAM25EA8MYX2 175 aa12.16□□□□□ -0.46
NXF1-201ENST00000294172 SDCBPO00560 298 aaPredicted RBP12.16□□□□□ -0.46
NXF1-201ENST00000294172 EDN3P14138 238 aa12.16□□□□□ -0.46
NXF1-201ENST00000294172 PPP3CBP16298 524 aa12.16□□□□□ -0.46
NXF1-201ENST00000294172 NAT1P18440 290 aa12.16□□□□□ -0.46
NXF1-201ENST00000294172 CBX5P45973 191 aa12.16□□□□□ -0.46
NXF1-201ENST00000294172 OR3A2P47893 321 aa12.16□□□□□ -0.46
NXF1-201ENST00000294172 RBP2P50120 134 aa12.16□□□□□ -0.46
NXF1-201ENST00000294172 SLC10A1Q14973 349 aa12.16□□□□□ -0.46
NXF1-201ENST00000294172 CLLU1Q5K131 121 aa12.16□□□□□ -0.46
NXF1-201ENST00000294172 TMPRSS7Q7RTY8 843 aa12.16□□□□□ -0.46
NXF1-201ENST00000294172 VASH2Q86V25 355 aa12.16□□□□□ -0.46
NXF1-201ENST00000294172 COMMD7Q86VX2 200 aa12.16□□□□□ -0.46
NXF1-201ENST00000294172 HOGA1Q86XE5 327 aa12.16□□□□□ -0.46
NXF1-201ENST00000294172 MCEMP1Q8IX19 187 aa12.16□□□□□ -0.46
NXF1-201ENST00000294172 PIGCQ92535 297 aa12.16□□□□□ -0.46
NXF1-201ENST00000294172 APH1AQ96BI3 265 aa12.16□□□□□ -0.46
NXF1-201ENST00000294172 SEC22AQ96IW7 307 aa12.16□□□□□ -0.46
NXF1-201ENST00000294172 TM2D1Q9BX74 207 aa12.16□□□□□ -0.46
NXF1-201ENST00000294172 LINC00470Q9BZP3 86 aa12.16□□□□□ -0.46
NXF1-201ENST00000294172 RGCCQ9H4X1 137 aa12.16□□□□□ -0.46
NXF1-201ENST00000294172 PARD6AQ9NPB6 346 aa12.16□□□□□ -0.46
NXF1-201ENST00000294172 ZNF701Q9NV72 531 aaPredicted RBP12.16□□□□□ -0.46
NXF1-201ENST00000294172 KCNN3Q9UGI6 736 aa12.16□□□□□ -0.46
NXF1-201ENST00000294172 ANAPC10Q9UM13 185 aa12.16□□□□□ -0.46
NXF1-201ENST00000294172 DMXL1Q9Y485 3027 aa12.15□□□□□ -0.46
NXF1-201ENST00000294172 hCG_38984A0A1B0GV85 526 aa12.15□□□□□ -0.46
NXF1-201ENST00000294172 AP2S1P53680 142 aaPredicted RBP12.15□□□□□ -0.46
NXF1-201ENST00000294172 IKZF1Q13422 519 aa12.15□□□□□ -0.46
NXF1-201ENST00000294172 GK2Q14410 553 aaPredicted RBP12.15□□□□□ -0.46
NXF1-201ENST00000294172 TAF9Q16594 264 aa12.15□□□□□ -0.46
NXF1-201ENST00000294172 ACTBL2Q562R1 376 aa12.15□□□□□ -0.46
NXF1-201ENST00000294172 VAX1Q5SQQ9 334 aa12.15□□□□□ -0.46
NXF1-201ENST00000294172 MOB3CQ70IA8 216 aa12.15□□□□□ -0.46
NXF1-201ENST00000294172 KCTD9Q7L273 389 aa12.15□□□□□ -0.46
NXF1-201ENST00000294172 ZNF100Q8IYN0 542 aa12.15□□□□□ -0.46
NXF1-201ENST00000294172 ZNF391Q9UJN7 358 aa12.15□□□□□ -0.46
NXF1-201ENST00000294172 AUP1Q9Y679 476 aa12.15□□□□□ -0.46
NXF1-201ENST00000294172 DOCK7Q96N67 2140 aa12.15□□□□□ -0.46
NXF1-201ENST00000294172 FRYQ5TBA9 3013 aa12.15□□□□□ -0.46
NXF1-201ENST00000294172 C5orf49A4QMS7 147 aa12.15□□□□□ -0.46
NXF1-201ENST00000294172 SERPINE3A8MV23 424 aa12.15□□□□□ -0.46
NXF1-201ENST00000294172 I3L521 148 aa12.15□□□□□ -0.46
NXF1-201ENST00000294172 EFSO43281 561 aa12.15□□□□□ -0.46
NXF1-201ENST00000294172 SERPINA5P05154 406 aa12.15□□□□□ -0.46
NXF1-201ENST00000294172 CD79AP11912 226 aa12.15□□□□□ -0.46
NXF1-201ENST00000294172 NRN1LQ496H8 165 aa12.15□□□□□ -0.46
NXF1-201ENST00000294172 LRRC37A5PQ49AS3 106 aa12.15□□□□□ -0.46
NXF1-201ENST00000294172 PLCXD3Q63HM9 321 aa12.15□□□□□ -0.46
NXF1-201ENST00000294172 ARRDC1Q8N5I2 433 aa12.15□□□□□ -0.46
NXF1-201ENST00000294172 OR5M8Q8NGP6 311 aa12.15□□□□□ -0.46
NXF1-201ENST00000294172 CPNE2Q96FN4 548 aaPredicted RBP12.15□□□□□ -0.46
NXF1-201ENST00000294172 PHB2Q99623 299 aa12.15□□□□□ -0.46
NXF1-201ENST00000294172 ARL6Q9H0F7 186 aa12.15□□□□□ -0.46
NXF1-201ENST00000294172 HMSDA8MTL9 139 aa12.14□□□□□ -0.47
NXF1-201ENST00000294172 PDGFAP04085 211 aa12.14□□□□□ -0.47
NXF1-201ENST00000294172 FTH1P19P0C7X4 201 aa12.14□□□□□ -0.47
NXF1-201ENST00000294172 PI3P19957 117 aa12.14□□□□□ -0.47
NXF1-201ENST00000294172 S100A11P31949 105 aa12.14□□□□□ -0.47
NXF1-201ENST00000294172 BAMBIQ13145 260 aa12.14□□□□□ -0.47
NXF1-201ENST00000294172 ZNF766Q5HY98 468 aa12.14□□□□□ -0.47
NXF1-201ENST00000294172 FAM209AQ5JX71 171 aa12.14□□□□□ -0.47
NXF1-201ENST00000294172 LHFPL2Q6ZUX7 228 aa12.14□□□□□ -0.47
NXF1-201ENST00000294172 RFPL4BQ6ZWI9 263 aa12.14□□□□□ -0.47
NXF1-201ENST00000294172 TMUB2Q71RG4 321 aa12.14□□□□□ -0.47
NXF1-201ENST00000294172 NUFIP2Q7Z417 695 aaKnown RBP12.14□□□□□ -0.47
NXF1-201ENST00000294172 PIP4P1Q86T03 277 aa12.14□□□□□ -0.47
NXF1-201ENST00000294172 ZFP62Q8NB50 900 aaPredicted RBP12.14□□□□□ -0.47
NXF1-201ENST00000294172 Q96M66 194 aa12.14□□□□□ -0.47
NXF1-201ENST00000294172 HDHD3Q9BSH5 251 aaPredicted RBP12.14□□□□□ -0.47
NXF1-201ENST00000294172 C12orf49Q9H741 205 aa12.14□□□□□ -0.47
NXF1-201ENST00000294172 BCO1Q9HAY6 547 aa12.14□□□□□ -0.47
NXF1-201ENST00000294172 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.14□□□□□ -0.47
NXF1-201ENST00000294172 EHFQ9NZC4 300 aa12.14□□□□□ -0.47
NXF1-201ENST00000294172 ZNF581Q9P0T4 197 aa12.14□□□□□ -0.47
NXF1-201ENST00000294172 SLC7A11Q9UPY5 501 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms