RNA–Protein interactions for RNA: ENST00000294129.6

NCKIPSD-201, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,989 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-201ENST00000294129 A0A0U1RQV5 110 aa13.8□□□□□ -0.2
NCKIPSD-201ENST00000294129 RNF222A6NCQ9 220 aa13.8□□□□□ -0.2
NCKIPSD-201ENST00000294129 DUS4LO95620 317 aaKnown RBP13.8□□□□□ -0.2
NCKIPSD-201ENST00000294129 IL2RAP01589 272 aa13.8□□□□□ -0.2
NCKIPSD-201ENST00000294129 PGAM2P15259 253 aa13.8□□□□□ -0.2
NCKIPSD-201ENST00000294129 OR5M9Q8NGP3 310 aa13.8□□□□□ -0.2
NCKIPSD-201ENST00000294129 CHMP1AQ9HD42 196 aaPredicted RBP13.8□□□□□ -0.2
NCKIPSD-201ENST00000294129 GSKIPQ9P0R6 139 aa13.8□□□□□ -0.2
NCKIPSD-201ENST00000294129 MCTS1Q9ULC4 181 aaKnown RBP13.8□□□□□ -0.2
NCKIPSD-201ENST00000294129 CSAG2Q9Y5P2 127 aa13.8□□□□□ -0.2
NCKIPSD-201ENST00000294129 V9GYS6 101 aa13.8□□□□□ -0.2
NCKIPSD-201ENST00000294129 CSTBP04080 98 aaKnown RBP13.79□□□□□ -0.2
NCKIPSD-201ENST00000294129 UBBP0CG47 229 aa13.79□□□□□ -0.2
NCKIPSD-201ENST00000294129 CTSSP25774 331 aa13.79□□□□□ -0.2
NCKIPSD-201ENST00000294129 OPRM1P35372 400 aa13.79□□□□□ -0.2
NCKIPSD-201ENST00000294129 RRADP55042 308 aa13.79□□□□□ -0.2
NCKIPSD-201ENST00000294129 MRPS34P82930 218 aaKnown RBP13.79□□□□□ -0.2
NCKIPSD-201ENST00000294129 JMJD6Q6NYC1 403 aaPredicted RBP13.79□□□□□ -0.2
NCKIPSD-201ENST00000294129 LPCAT3Q6P1A2 487 aa13.79□□□□□ -0.2
NCKIPSD-201ENST00000294129 CLEC18BQ6UXF7 455 aa13.79□□□□□ -0.2
NCKIPSD-201ENST00000294129 SSC4DQ8WTU2 575 aa13.79□□□□□ -0.2
NCKIPSD-201ENST00000294129 PP6455Q8WZ26 134 aa13.79□□□□□ -0.2
NCKIPSD-201ENST00000294129 HAS2Q92819 552 aa13.79□□□□□ -0.2
NCKIPSD-201ENST00000294129 TMEM230Q96A57 120 aa13.79□□□□□ -0.2
NCKIPSD-201ENST00000294129 METTL8Q9H825 291 aaKnown RBP13.79□□□□□ -0.2
NCKIPSD-201ENST00000294129 LRFN1Q9P244 771 aa13.79□□□□□ -0.2
NCKIPSD-201ENST00000294129 GPR160Q9UJ42 338 aa13.79□□□□□ -0.2
NCKIPSD-201ENST00000294129 SHANK1Q9Y566 2161 aa13.79□□□□□ -0.2
NCKIPSD-201ENST00000294129 HOXB5P09067 269 aa13.79□□□□□ -0.2
NCKIPSD-201ENST00000294129 CELA3AP09093 270 aa13.79□□□□□ -0.2
NCKIPSD-201ENST00000294129 TBPP20226 339 aa13.79□□□□□ -0.2
NCKIPSD-201ENST00000294129 CLDN15P56746 228 aa13.79□□□□□ -0.2
NCKIPSD-201ENST00000294129 RSU1Q15404 277 aa13.79□□□□□ -0.2
NCKIPSD-201ENST00000294129 TMEM128Q5BJH2 165 aa13.79□□□□□ -0.2
NCKIPSD-201ENST00000294129 SLC16A14Q7RTX9 510 aa13.79□□□□□ -0.2
NCKIPSD-201ENST00000294129 OR1F12Q8NHA8 337 aa13.79□□□□□ -0.2
NCKIPSD-201ENST00000294129 TMEM38BQ9NVV0 291 aa13.79□□□□□ -0.2
NCKIPSD-201ENST00000294129 A0A0D9SG52 128 aa13.78□□□□□ -0.2
NCKIPSD-201ENST00000294129 A8MXK9 166 aa13.78□□□□□ -0.2
NCKIPSD-201ENST00000294129 IQCF2Q8IXL9 164 aa13.78□□□□□ -0.2
NCKIPSD-201ENST00000294129 OR2V1Q8NHB1 315 aa13.78□□□□□ -0.2
NCKIPSD-201ENST00000294129 CDC6Q99741 560 aa13.78□□□□□ -0.2
NCKIPSD-201ENST00000294129 FOXB1Q99853 325 aa13.78□□□□□ -0.2
NCKIPSD-201ENST00000294129 FAAP24Q9BTP7 215 aa13.78□□□□□ -0.2
NCKIPSD-201ENST00000294129 A0A096LPE4 126 aa13.78□□□□□ -0.2
NCKIPSD-201ENST00000294129 A0A1W2PPZ6 126 aa13.78□□□□□ -0.2
NCKIPSD-201ENST00000294129 ZNF716A6NP11 495 aa13.78□□□□□ -0.2
NCKIPSD-201ENST00000294129 FAM166BA8MTA8 275 aa13.78□□□□□ -0.2
NCKIPSD-201ENST00000294129 KRBOX1C9JBD0 128 aa13.78□□□□□ -0.2
NCKIPSD-201ENST00000294129 IGLV3-1P01715 115 aa13.78□□□□□ -0.2
NCKIPSD-201ENST00000294129 SPINK2P20155 84 aa13.78□□□□□ -0.2
NCKIPSD-201ENST00000294129 CPT2P23786 658 aa13.78□□□□□ -0.2
NCKIPSD-201ENST00000294129 OTX1P32242 354 aaPredicted RBP13.78□□□□□ -0.2
NCKIPSD-201ENST00000294129 MPLP40238 635 aa13.78□□□□□ -0.2
NCKIPSD-201ENST00000294129 PSG4Q00888 419 aa13.78□□□□□ -0.2
NCKIPSD-201ENST00000294129 PEAR1Q5VY43 1037 aaPredicted RBP13.78□□□□□ -0.2
NCKIPSD-201ENST00000294129 FAM122CQ6P4D5 195 aa13.78□□□□□ -0.2
NCKIPSD-201ENST00000294129 LINC00696Q6ZRV3 163 aa13.78□□□□□ -0.2
NCKIPSD-201ENST00000294129 KCNRGQ8N5I3 272 aa13.78□□□□□ -0.2
NCKIPSD-201ENST00000294129 PLA2G3Q9NZ20 509 aa13.78□□□□□ -0.2
NCKIPSD-201ENST00000294129 FOXJ2Q9P0K8 574 aa13.78□□□□□ -0.2
NCKIPSD-201ENST00000294129 GPR132Q9UNW8 380 aa13.78□□□□□ -0.2
NCKIPSD-201ENST00000294129 SYNGR3O43761 229 aa13.77□□□□□ -0.2
NCKIPSD-201ENST00000294129 APOC3P02656 99 aa13.77□□□□□ -0.2
NCKIPSD-201ENST00000294129 ARHGDIBP52566 201 aa13.77□□□□□ -0.2
NCKIPSD-201ENST00000294129 RAB35Q15286 201 aa13.77□□□□□ -0.2
NCKIPSD-201ENST00000294129 PNLIPRP3Q17RR3 467 aa13.77□□□□□ -0.2
NCKIPSD-201ENST00000294129 ANKRD55Q3KP44 614 aa13.77□□□□□ -0.2
NCKIPSD-201ENST00000294129 TMEM17Q86X19 198 aa13.77□□□□□ -0.2
NCKIPSD-201ENST00000294129 ARRDC1Q8N5I2 433 aa13.77□□□□□ -0.2
NCKIPSD-201ENST00000294129 OR52H1Q8NGJ2 320 aa13.77□□□□□ -0.2
NCKIPSD-201ENST00000294129 OCSTAMPQ9BR26 566 aa13.77□□□□□ -0.2
NCKIPSD-201ENST00000294129 IGKV1-27A0A075B6S5 117 aa13.77□□□□□ -0.21
NCKIPSD-201ENST00000294129 DHRS7CA6NNS2 312 aa13.77□□□□□ -0.21
NCKIPSD-201ENST00000294129 CACNA1HO95180 2353 aa13.77□□□□□ -0.21
NCKIPSD-201ENST00000294129 GLI4P10075 376 aa13.77□□□□□ -0.21
NCKIPSD-201ENST00000294129 NAT2P11245 290 aa13.77□□□□□ -0.21
NCKIPSD-201ENST00000294129 CCL2P13500 99 aa13.77□□□□□ -0.21
NCKIPSD-201ENST00000294129 ICAM2P13598 275 aa13.77□□□□□ -0.21
NCKIPSD-201ENST00000294129 VAX1Q5SQQ9 334 aa13.77□□□□□ -0.21
NCKIPSD-201ENST00000294129 AADACL3Q5VUY0 350 aa13.77□□□□□ -0.21
NCKIPSD-201ENST00000294129 ACOT7LQ6ZUV0 252 aa13.77□□□□□ -0.21
NCKIPSD-201ENST00000294129 BVESQ8NE79 360 aa13.77□□□□□ -0.21
NCKIPSD-201ENST00000294129 NARS2Q96I59 477 aaKnown RBP13.77□□□□□ -0.21
NCKIPSD-201ENST00000294129 AIFM2Q9BRQ8 373 aa13.77□□□□□ -0.21
NCKIPSD-201ENST00000294129 RTBDNQ9BSG5 229 aaPredicted RBP13.77□□□□□ -0.21
NCKIPSD-201ENST00000294129 PCDHGA1Q9Y5H4 931 aa13.77□□□□□ -0.21
NCKIPSD-201ENST00000294129 A0A0B4J2A0 478 aa13.77□□□□□ -0.21
NCKIPSD-201ENST00000294129 SNAPC5O75971 98 aa13.77□□□□□ -0.21
NCKIPSD-201ENST00000294129 SFTPBP07988 381 aa13.77□□□□□ -0.21
NCKIPSD-201ENST00000294129 MPZP25189 248 aa13.77□□□□□ -0.21
NCKIPSD-201ENST00000294129 PSMB6P28072 239 aa13.77□□□□□ -0.21
NCKIPSD-201ENST00000294129 TAS2R31P59538 309 aa13.77□□□□□ -0.21
NCKIPSD-201ENST00000294129 UBA52P62987 128 aaKnown RBP13.77□□□□□ -0.21
NCKIPSD-201ENST00000294129 HIST1H3AP68431 136 aa13.77□□□□□ -0.21
NCKIPSD-201ENST00000294129 ZNF273Q14593 569 aa13.77□□□□□ -0.21
NCKIPSD-201ENST00000294129 PIGYQ3MUY2 71 aa13.77□□□□□ -0.21
NCKIPSD-201ENST00000294129 HIST2H3PS2Q5TEC6 136 aa13.77□□□□□ -0.21
NCKIPSD-201ENST00000294129 ATRAIDQ6UW56 229 aa13.77□□□□□ -0.21
NCKIPSD-201ENST00000294129 FOXL2NBQ6ZUU3 175 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms