RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 ICE1Q9Y2F5 2266 aa15.56■□□□□ 0.08
CAPN1-201ENST00000279247 OR2AT4A6NND4 320 aa15.56■□□□□ 0.08
CAPN1-201ENST00000279247 HLA-AP01891 365 aaKnown RBP15.56■□□□□ 0.08
CAPN1-201ENST00000279247 AMY2BP19961 511 aa15.56■□□□□ 0.08
CAPN1-201ENST00000279247 NPY4RP50391 375 aa15.56■□□□□ 0.08
CAPN1-201ENST00000279247 FOXC1Q12948 553 aa15.56■□□□□ 0.08
CAPN1-201ENST00000279247 CNEP1R1Q8N9A8 125 aa15.56■□□□□ 0.08
CAPN1-201ENST00000279247 FBXW5Q969U6 566 aa15.56■□□□□ 0.08
CAPN1-201ENST00000279247 TRIB1Q96RU8 372 aa15.56■□□□□ 0.08
CAPN1-201ENST00000279247 PLEKHJ1Q9NW61 149 aa15.56■□□□□ 0.08
CAPN1-201ENST00000279247 PTTG3PQ9NZH4 202 aa15.56■□□□□ 0.08
CAPN1-201ENST00000279247 FAM25EA8MYX2 175 aa15.55■□□□□ 0.08
CAPN1-201ENST00000279247 C3orf80F5H4A9 247 aa15.55■□□□□ 0.08
CAPN1-201ENST00000279247 RGS13O14921 159 aa15.55■□□□□ 0.08
CAPN1-201ENST00000279247 RBP2P50120 134 aa15.55■□□□□ 0.08
CAPN1-201ENST00000279247 SSBP1Q04837 148 aaKnown RBP15.55■□□□□ 0.08
CAPN1-201ENST00000279247 CAMK2BQ13554 666 aa15.55■□□□□ 0.08
CAPN1-201ENST00000279247 PIGYQ3MUY2 71 aa15.55■□□□□ 0.08
CAPN1-201ENST00000279247 MARCH1Q8TCQ1 289 aa15.55■□□□□ 0.08
CAPN1-201ENST00000279247 BCO1Q9HAY6 547 aa15.55■□□□□ 0.08
CAPN1-201ENST00000279247 NOP16Q9Y3C1 178 aaKnown RBP15.55■□□□□ 0.08
CAPN1-201ENST00000279247 hCG_38984A0A1B0GV85 526 aa15.55■□□□□ 0.08
CAPN1-201ENST00000279247 SLC22A5O76082 557 aa15.55■□□□□ 0.08
CAPN1-201ENST00000279247 ACTL6AO96019 429 aa15.55■□□□□ 0.08
CAPN1-201ENST00000279247 LRRC37A5PQ49AS3 106 aa15.55■□□□□ 0.08
CAPN1-201ENST00000279247 OR2AK2Q8NG84 335 aa15.55■□□□□ 0.08
CAPN1-201ENST00000279247 ACKR4Q9NPB9 350 aa15.55■□□□□ 0.08
CAPN1-201ENST00000279247 BSNQ9UPA5 3926 aa15.55■□□□□ 0.08
CAPN1-201ENST00000279247 IGHV3-64DA0A0J9YX35 117 aa15.54■□□□□ 0.08
CAPN1-201ENST00000279247 OR14I1A6ND48 311 aa15.54■□□□□ 0.08
CAPN1-201ENST00000279247 IL5P05113 134 aa15.54■□□□□ 0.08
CAPN1-201ENST00000279247 IL32P24001 234 aa15.54■□□□□ 0.08
CAPN1-201ENST00000279247 CD82P27701 267 aa15.54■□□□□ 0.08
CAPN1-201ENST00000279247 HTR2BP41595 481 aa15.54■□□□□ 0.08
CAPN1-201ENST00000279247 RNPS1Q15287 305 aaKnown RBP15.54■□□□□ 0.08
CAPN1-201ENST00000279247 CLVS2Q5SYC1 327 aa15.54■□□□□ 0.08
CAPN1-201ENST00000279247 DPCDQ9BVM2 203 aaPredicted RBP15.54■□□□□ 0.08
CAPN1-201ENST00000279247 PIPOXQ9P0Z9 390 aa15.54■□□□□ 0.08
CAPN1-201ENST00000279247 PCNX1Q96RV3 2341 aa15.54■□□□□ 0.08
CAPN1-201ENST00000279247 NCOR2Q9Y618 2525 aa15.54■□□□□ 0.08
CAPN1-201ENST00000279247 FXYD6-FXYD2A0A087WZ82 144 aa15.54■□□□□ 0.08
CAPN1-201ENST00000279247 CD74P04233 296 aa15.54■□□□□ 0.08
CAPN1-201ENST00000279247 SERPINA5P05154 406 aa15.54■□□□□ 0.08
CAPN1-201ENST00000279247 NAT2P11245 290 aa15.54■□□□□ 0.08
CAPN1-201ENST00000279247 AGTR1P30556 359 aa15.54■□□□□ 0.08
CAPN1-201ENST00000279247 GK2Q14410 553 aaPredicted RBP15.54■□□□□ 0.08
CAPN1-201ENST00000279247 LGALSLQ3ZCW2 172 aaPredicted RBP15.54■□□□□ 0.08
CAPN1-201ENST00000279247 ADAD2Q8NCV1 583 aaKnown RBP15.54■□□□□ 0.08
CAPN1-201ENST00000279247 CSNK2A3Q8NEV1 391 aa15.54■□□□□ 0.08
CAPN1-201ENST00000279247 FAAP24Q9BTP7 215 aa15.54■□□□□ 0.08
CAPN1-201ENST00000279247 FXYD6Q9H0Q3 95 aa15.54■□□□□ 0.08
CAPN1-201ENST00000279247 SLA2Q9H6Q3 261 aa15.54■□□□□ 0.08
CAPN1-201ENST00000279247 PRR13Q9NZ81 148 aa15.54■□□□□ 0.08
CAPN1-201ENST00000279247 STARD10Q9Y365 291 aa15.54■□□□□ 0.08
CAPN1-201ENST00000279247 G3V3Q6 166 aa15.54■□□□□ 0.08
CAPN1-201ENST00000279247 MFNGO00587 321 aa15.54■□□□□ 0.08
CAPN1-201ENST00000279247 LYZL6O75951 148 aa15.54■□□□□ 0.08
CAPN1-201ENST00000279247 MELTFP08582 738 aa15.54■□□□□ 0.08
CAPN1-201ENST00000279247 UBBP0CG47 229 aa15.54■□□□□ 0.08
CAPN1-201ENST00000279247 OR3A3P47888 321 aa15.54■□□□□ 0.08
CAPN1-201ENST00000279247 OR3A2P47893 321 aa15.54■□□□□ 0.08
CAPN1-201ENST00000279247 DHRS2Q13268 280 aa15.54■□□□□ 0.08
CAPN1-201ENST00000279247 MEF2DQ14814 521 aa15.54■□□□□ 0.08
CAPN1-201ENST00000279247 CNN3Q15417 329 aaKnown RBP15.54■□□□□ 0.08
CAPN1-201ENST00000279247 ALKBH2Q6NS38 261 aa15.54■□□□□ 0.08
CAPN1-201ENST00000279247 KCTD9Q7L273 389 aa15.54■□□□□ 0.08
CAPN1-201ENST00000279247 MRPL21Q7Z2W9 205 aaKnown RBP15.54■□□□□ 0.08
CAPN1-201ENST00000279247 CALHM1Q8IU99 346 aa15.54■□□□□ 0.08
CAPN1-201ENST00000279247 MRGPRFQ96AM1 343 aa15.54■□□□□ 0.08
CAPN1-201ENST00000279247 SEC22AQ96IW7 307 aa15.54■□□□□ 0.08
CAPN1-201ENST00000279247 SNRPGP15A8MWD9 76 aa15.53■□□□□ 0.08
CAPN1-201ENST00000279247 SCGNO76038 276 aa15.53■□□□□ 0.08
CAPN1-201ENST00000279247 SFTPBP07988 381 aa15.53■□□□□ 0.08
CAPN1-201ENST00000279247 OPRM1P35372 400 aa15.53■□□□□ 0.08
CAPN1-201ENST00000279247 AP2S1P53680 142 aaPredicted RBP15.53■□□□□ 0.08
CAPN1-201ENST00000279247 LIX1LQ8IVB5 337 aa15.53■□□□□ 0.08
CAPN1-201ENST00000279247 CCDC120Q96HB5 630 aa15.53■□□□□ 0.08
CAPN1-201ENST00000279247 PRRT1Q99946 306 aa15.53■□□□□ 0.08
CAPN1-201ENST00000279247 SLC25A21Q9BQT8 299 aaPredicted RBP15.53■□□□□ 0.08
CAPN1-201ENST00000279247 PECRQ9BY49 303 aa15.53■□□□□ 0.08
CAPN1-201ENST00000279247 METTL9Q9H1A3 318 aa15.53■□□□□ 0.08
CAPN1-201ENST00000279247 RYDENQ9NUL5 291 aaKnown RBP15.53■□□□□ 0.08
CAPN1-201ENST00000279247 SLC7A11Q9UPY5 501 aa15.53■□□□□ 0.08
CAPN1-201ENST00000279247 CADP27708 2225 aa15.53■□□□□ 0.08
CAPN1-201ENST00000279247 CPT2P23786 658 aa15.53■□□□□ 0.08
CAPN1-201ENST00000279247 PLP2Q04941 152 aa15.53■□□□□ 0.08
CAPN1-201ENST00000279247 BCL2A1Q16548 175 aa15.53■□□□□ 0.08
CAPN1-201ENST00000279247 FBXL14Q8N1E6 418 aa15.53■□□□□ 0.08
CAPN1-201ENST00000279247 LINC00470Q9BZP3 86 aa15.53■□□□□ 0.08
CAPN1-201ENST00000279247 IGKV1-12A0A0C4DH73 117 aa15.52■□□□□ 0.08
CAPN1-201ENST00000279247 GEMIN2O14893 280 aaKnown RBP15.52■□□□□ 0.08
CAPN1-201ENST00000279247 ARPC5O15511 151 aa15.52■□□□□ 0.08
CAPN1-201ENST00000279247 GFRA3O60609 400 aa15.52■□□□□ 0.08
CAPN1-201ENST00000279247 IGKV1D-12P01611 117 aa15.52■□□□□ 0.08
CAPN1-201ENST00000279247 GSTP1P09211 210 aaKnown RBP15.52■□□□□ 0.08
CAPN1-201ENST00000279247 PPP1R1AQ13522 171 aa15.52■□□□□ 0.08
CAPN1-201ENST00000279247 SLC25A26Q70HW3 274 aa15.52■□□□□ 0.08
CAPN1-201ENST00000279247 OR51F2Q8NH61 342 aa15.52■□□□□ 0.08
CAPN1-201ENST00000279247 CCDC107Q8WV48 283 aa15.52■□□□□ 0.08
CAPN1-201ENST00000279247 ELMOD3Q96FG2 381 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms