RNA–Protein interactions for RNA: ENST00000277549.9

CACNA1B-201, Transcript of calcium voltage-gated channel subunit alpha1 B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1B, Length 7,158 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1B-201ENST00000277549 ERRFI1Q9UJM3 462 aaPredicted RBP18.21■□□□□ 0.51
CACNA1B-201ENST00000277549 TRAV34A0A0B4J273 112 aa18.21■□□□□ 0.51
CACNA1B-201ENST00000277549 FGF8P55075 233 aaPredicted RBP18.21■□□□□ 0.51
CACNA1B-201ENST00000277549 GPX8Q8TED1 209 aa18.21■□□□□ 0.51
CACNA1B-201ENST00000277549 NKX6-2Q9C056 277 aaPredicted RBP18.21■□□□□ 0.51
CACNA1B-201ENST00000277549 TMEM38AQ9H6F2 299 aa18.21■□□□□ 0.51
CACNA1B-201ENST00000277549 MYH15Q9Y2K3 1946 aa18.21■□□□□ 0.51
CACNA1B-201ENST00000277549 RPS4XP62701 263 aaKnown RBP18.21■□□□□ 0.5
CACNA1B-201ENST00000277549 PDZK1IP1Q13113 114 aa18.21■□□□□ 0.5
CACNA1B-201ENST00000277549 WDR88Q6ZMY6 472 aa18.21■□□□□ 0.5
CACNA1B-201ENST00000277549 ZFAND2BQ8WV99 257 aa18.21■□□□□ 0.5
CACNA1B-201ENST00000277549 RER1O15258 196 aa18.2■□□□□ 0.5
CACNA1B-201ENST00000277549 LRP11Q86VZ4 500 aa18.2■□□□□ 0.5
CACNA1B-201ENST00000277549 NANOGP1Q8N7R0 232 aa18.2■□□□□ 0.5
CACNA1B-201ENST00000277549 TMEM200CA6NKL6 621 aa18.2■□□□□ 0.5
CACNA1B-201ENST00000277549 SNRPCP09234 159 aaKnown RBP18.2■□□□□ 0.5
CACNA1B-201ENST00000277549 REG1BP48304 166 aa18.2■□□□□ 0.5
CACNA1B-201ENST00000277549 SULT1A1P50225 295 aa18.2■□□□□ 0.5
CACNA1B-201ENST00000277549 PABPC1L2AQ5JQF8 200 aa18.2■□□□□ 0.5
CACNA1B-201ENST00000277549 SLC51BQ86UW2 128 aa18.2■□□□□ 0.5
CACNA1B-201ENST00000277549 FAAP24Q9BTP7 215 aa18.2■□□□□ 0.5
CACNA1B-201ENST00000277549 VN1R1Q9GZP7 353 aa18.2■□□□□ 0.5
CACNA1B-201ENST00000277549 ZNF586Q9NXT0 402 aa18.2■□□□□ 0.5
CACNA1B-201ENST00000277549 ZMIZ1Q9ULJ6 1067 aa18.2■□□□□ 0.5
CACNA1B-201ENST00000277549 YTHDF2Q9Y5A9 579 aaKnown RBP18.2■□□□□ 0.5
CACNA1B-201ENST00000277549 CCR9P51686 369 aa18.2■□□□□ 0.5
CACNA1B-201ENST00000277549 C4BP0C0L5 1744 aa18.2■□□□□ 0.5
CACNA1B-201ENST00000277549 KIRREL2Q6UWL6 708 aa18.19■□□□□ 0.5
CACNA1B-201ENST00000277549 ZNF841Q6ZN19 808 aa18.19■□□□□ 0.5
CACNA1B-201ENST00000277549 P2RX4Q99571 388 aa18.19■□□□□ 0.5
CACNA1B-201ENST00000277549 NDUFB11Q9NX14 153 aa18.19■□□□□ 0.5
CACNA1B-201ENST00000277549 LRP12Q9Y561 859 aa18.19■□□□□ 0.5
CACNA1B-201ENST00000277549 SHPRHQ149N8 1683 aa18.19■□□□□ 0.5
CACNA1B-201ENST00000277549 C5orf52A6NGY3 159 aa18.19■□□□□ 0.5
CACNA1B-201ENST00000277549 C21orf58P58505 322 aa18.19■□□□□ 0.5
CACNA1B-201ENST00000277549 CIB3Q96Q77 187 aaPredicted RBP18.19■□□□□ 0.5
CACNA1B-201ENST00000277549 POMT2Q9UKY4 750 aa18.19■□□□□ 0.5
CACNA1B-201ENST00000277549 ORM1P02763 201 aa18.19■□□□□ 0.5
CACNA1B-201ENST00000277549 SP1P08047 785 aa18.19■□□□□ 0.5
CACNA1B-201ENST00000277549 FBP1P09467 338 aa18.19■□□□□ 0.5
CACNA1B-201ENST00000277549 ETV6P41212 452 aa18.19■□□□□ 0.5
CACNA1B-201ENST00000277549 CAMPP49913 170 aa18.19■□□□□ 0.5
CACNA1B-201ENST00000277549 CLEC9AQ6UXN8 241 aa18.19■□□□□ 0.5
CACNA1B-201ENST00000277549 STAC2Q6ZMT1 411 aa18.19■□□□□ 0.5
CACNA1B-201ENST00000277549 GTF2H5Q6ZYL4 71 aa18.19■□□□□ 0.5
CACNA1B-201ENST00000277549 SEBOXQ9HB31 216 aaPredicted RBP18.19■□□□□ 0.5
CACNA1B-201ENST00000277549 ASB1Q9Y576 335 aa18.19■□□□□ 0.5
CACNA1B-201ENST00000277549 GABRG3Q99928 467 aa18.19■□□□□ 0.5
CACNA1B-201ENST00000277549 SERGEFQ9UGK8 458 aa18.19■□□□□ 0.5
CACNA1B-201ENST00000277549 LAMP3Q9UQV4 416 aa18.19■□□□□ 0.5
CACNA1B-201ENST00000277549 NUP188Q5SRE5 1749 aa18.19■□□□□ 0.5
CACNA1B-201ENST00000277549 HTR1DP28221 377 aa18.19■□□□□ 0.5
CACNA1B-201ENST00000277549 TAS2R60P59551 318 aa18.19■□□□□ 0.5
CACNA1B-201ENST00000277549 PPP1CAP62136 330 aa18.19■□□□□ 0.5
CACNA1B-201ENST00000277549 FOXO1Q12778 655 aa18.19■□□□□ 0.5
CACNA1B-201ENST00000277549 SSPNQ14714 243 aa18.19■□□□□ 0.5
CACNA1B-201ENST00000277549 ARRB2P32121 409 aa18.19■□□□□ 0.5
CACNA1B-201ENST00000277549 GPR3P46089 330 aa18.19■□□□□ 0.5
CACNA1B-201ENST00000277549 ENDOGQ14249 297 aaKnown RBP18.19■□□□□ 0.5
CACNA1B-201ENST00000277549 PRSS3P2Q8NHM4 247 aa18.19■□□□□ 0.5
CACNA1B-201ENST00000277549 RBFOX1Q9NWB1 397 aaKnown RBP18.19■□□□□ 0.5
CACNA1B-201ENST00000277549 TRAPPC1Q9Y5R8 145 aa18.19■□□□□ 0.5
CACNA1B-201ENST00000277549 TRDV1A0A1B0GX56 115 aa18.18■□□□□ 0.5
CACNA1B-201ENST00000277549 CALHM3Q86XJ0 350 aa18.18■□□□□ 0.5
CACNA1B-201ENST00000277549 SPTY2D1-AS1A0A0U1RR47 76 aa18.18■□□□□ 0.5
CACNA1B-201ENST00000277549 A0A1W2PPE3 182 aa18.18■□□□□ 0.5
CACNA1B-201ENST00000277549 DHODHQ02127 395 aa18.18■□□□□ 0.5
CACNA1B-201ENST00000277549 UBE2L6O14933 153 aa18.18■□□□□ 0.5
CACNA1B-201ENST00000277549 MAVSQ7Z434 540 aa18.18■□□□□ 0.5
CACNA1B-201ENST00000277549 A0A087WUJ7 227 aa18.18■□□□□ 0.5
CACNA1B-201ENST00000277549 EGR3Q06889 387 aa18.18■□□□□ 0.5
CACNA1B-201ENST00000277549 RRN3P1Q2M238 152 aa18.18■□□□□ 0.5
CACNA1B-201ENST00000277549 EMC4Q5J8M3 183 aa18.18■□□□□ 0.5
CACNA1B-201ENST00000277549 RTN4IP1Q8WWV3 396 aaPredicted RBP18.18■□□□□ 0.5
CACNA1B-201ENST00000277549 TMSB15BA0A087X1C1 80 aa18.18■□□□□ 0.5
CACNA1B-201ENST00000277549 SIRT3Q9NTG7 399 aaPredicted RBP18.18■□□□□ 0.5
CACNA1B-201ENST00000277549 SIRT5Q9NXA8 310 aa18.18■□□□□ 0.5
CACNA1B-201ENST00000277549 MTCH2Q9Y6C9 303 aa18.18■□□□□ 0.5
CACNA1B-201ENST00000277549 KIAA1324LA8MWY0 1029 aaPredicted RBP18.17■□□□□ 0.5
CACNA1B-201ENST00000277549 PRSS41Q7RTY9 318 aa18.17■□□□□ 0.5
CACNA1B-201ENST00000277549 JAM3Q9BX67 310 aa18.17■□□□□ 0.5
CACNA1B-201ENST00000277549 ACER3Q9NUN7 267 aa18.17■□□□□ 0.5
CACNA1B-201ENST00000277549 VSIG4Q9Y279 399 aa18.17■□□□□ 0.5
CACNA1B-201ENST00000277549 ADAM10O14672 748 aa18.17■□□□□ 0.5
CACNA1B-201ENST00000277549 RNPS1Q15287 305 aaKnown RBP18.17■□□□□ 0.5
CACNA1B-201ENST00000277549 TMEM92Q6UXU6 159 aa18.17■□□□□ 0.5
CACNA1B-201ENST00000277549 MUC15Q8N387 334 aa18.17■□□□□ 0.5
CACNA1B-201ENST00000277549 RHOXF1Q8NHV9 184 aa18.17■□□□□ 0.5
CACNA1B-201ENST00000277549 CXorf58Q96LI9 332 aa18.17■□□□□ 0.5
CACNA1B-201ENST00000277549 LRP6O75581 1613 aa18.17■□□□□ 0.5
CACNA1B-201ENST00000277549 ETHE1O95571 254 aa18.17■□□□□ 0.5
CACNA1B-201ENST00000277549 NSUN5P2Q63ZY6 315 aa18.17■□□□□ 0.5
CACNA1B-201ENST00000277549 APOBEC4Q8WW27 367 aaKnown RBP18.17■□□□□ 0.5
CACNA1B-201ENST00000277549 C4orf45Q96LM5 186 aa18.17■□□□□ 0.5
CACNA1B-201ENST00000277549 SLC25A21Q9BQT8 299 aaPredicted RBP18.17■□□□□ 0.5
CACNA1B-201ENST00000277549 DPH3P1Q9H4G8 78 aa18.17■□□□□ 0.5
CACNA1B-201ENST00000277549 NME1P15531 152 aaKnown RBP18.17■□□□□ 0.5
CACNA1B-201ENST00000277549 CHRDL1Q9BU40 450 aa18.17■□□□□ 0.5
CACNA1B-201ENST00000277549 B9D1Q9UPM9 204 aa18.17■□□□□ 0.5
CACNA1B-201ENST00000277549 LMO7DNF2Z398 122 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms