RNA–Protein interactions for RNA: ENST00000272793.9

UBR3-201, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UBR3, Length 8,005 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-201ENST00000272793 OR10V1Q8NGI7 309 aa14.28□□□□□ -0.12
UBR3-201ENST00000272793 OR2A14Q96R47 310 aa14.28□□□□□ -0.12
UBR3-201ENST00000272793 AKR7A2O43488 359 aa14.28□□□□□ -0.12
UBR3-201ENST00000272793 ZNF253O75346 499 aa14.28□□□□□ -0.12
UBR3-201ENST00000272793 SLC19A1P41440 591 aa14.28□□□□□ -0.12
UBR3-201ENST00000272793 CCR9P51686 369 aa14.28□□□□□ -0.12
UBR3-201ENST00000272793 FBXL14Q8N1E6 418 aa14.28□□□□□ -0.12
UBR3-201ENST00000272793 EDA2RQ9HAV5 297 aa14.28□□□□□ -0.12
UBR3-201ENST00000272793 PRSS38A1L453 326 aa14.28□□□□□ -0.12
UBR3-201ENST00000272793 RUNX3Q13761 415 aa14.28□□□□□ -0.12
UBR3-201ENST00000272793 SORT1Q99523 831 aa14.28□□□□□ -0.12
UBR3-201ENST00000272793 FZR1Q9UM11 496 aa14.28□□□□□ -0.12
UBR3-201ENST00000272793 LRRK1Q38SD2 2015 aa14.28□□□□□ -0.12
UBR3-201ENST00000272793 ARHGAP32A7KAX9 2087 aa14.28□□□□□ -0.12
UBR3-201ENST00000272793 K7ESF4 209 aa14.28□□□□□ -0.12
UBR3-201ENST00000272793 PPP6CO00743 305 aa14.28□□□□□ -0.12
UBR3-201ENST00000272793 SLC35E2P0CK97 266 aa14.28□□□□□ -0.12
UBR3-201ENST00000272793 RPEQ96AT9 228 aa14.28□□□□□ -0.12
UBR3-201ENST00000272793 ACER3Q9NUN7 267 aa14.28□□□□□ -0.12
UBR3-201ENST00000272793 COA3Q9Y2R0 106 aaPredicted RBP14.28□□□□□ -0.12
UBR3-201ENST00000272793 RIMS1Q86UR5 1692 aaKnown RBP14.28□□□□□ -0.12
UBR3-201ENST00000272793 RASL12Q9NYN1 266 aa14.28□□□□□ -0.12
UBR3-201ENST00000272793 IL36GQ9NZH8 169 aa14.28□□□□□ -0.12
UBR3-201ENST00000272793 POU3F3P20264 500 aaPredicted RBP14.28□□□□□ -0.12
UBR3-201ENST00000272793 TSPAN31Q12999 210 aa14.28□□□□□ -0.12
UBR3-201ENST00000272793 SMIM21Q3B7S5 101 aa14.28□□□□□ -0.12
UBR3-201ENST00000272793 SLC16A13Q7RTY0 426 aa14.28□□□□□ -0.12
UBR3-201ENST00000272793 UBE2FQ969M7 185 aa14.28□□□□□ -0.12
UBR3-201ENST00000272793 MFRPQ9BY79 579 aa14.28□□□□□ -0.12
UBR3-201ENST00000272793 F11RQ9Y624 299 aaKnown RBP14.28□□□□□ -0.12
UBR3-201ENST00000272793 IGHV3-15A0A0B4J1V0 119 aa14.28□□□□□ -0.12
UBR3-201ENST00000272793 DUXBA0A1W2PPF3 345 aa14.28□□□□□ -0.12
UBR3-201ENST00000272793 C9orf172C9J069 976 aa14.28□□□□□ -0.12
UBR3-201ENST00000272793 MED25Q71SY5 747 aa14.28□□□□□ -0.12
UBR3-201ENST00000272793 DND1Q8IYX4 353 aaKnown RBP14.28□□□□□ -0.12
UBR3-201ENST00000272793 COL25A1Q9BXS0 654 aaPredicted RBP14.28□□□□□ -0.12
UBR3-201ENST00000272793 A0A1W2PN81 502 aa14.27□□□□□ -0.12
UBR3-201ENST00000272793 C1QBP02746 253 aa14.27□□□□□ -0.12
UBR3-201ENST00000272793 FECHP22830 423 aa14.27□□□□□ -0.12
UBR3-201ENST00000272793 OR10J1P30954 320 aa14.27□□□□□ -0.12
UBR3-201ENST00000272793 CLPPQ16740 277 aaPredicted RBP14.27□□□□□ -0.12
UBR3-201ENST00000272793 FAM206AQ9NX38 181 aa14.27□□□□□ -0.12
UBR3-201ENST00000272793 ENTPD2Q9Y5L3 495 aa14.27□□□□□ -0.12
UBR3-201ENST00000272793 PEAK1Q9H792 1746 aa14.27□□□□□ -0.12
UBR3-201ENST00000272793 MT-ATP6P00846 226 aa14.27□□□□□ -0.12
UBR3-201ENST00000272793 LGALS3P17931 250 aaKnown RBP14.27□□□□□ -0.12
UBR3-201ENST00000272793 IL24Q13007 206 aa14.27□□□□□ -0.12
UBR3-201ENST00000272793 SNAI3Q3KNW1 292 aa14.27□□□□□ -0.12
UBR3-201ENST00000272793 VMA21Q3ZAQ7 101 aa14.27□□□□□ -0.12
UBR3-201ENST00000272793 DHRS4L2Q6PKH6 230 aa14.27□□□□□ -0.12
UBR3-201ENST00000272793 ADPRHL1Q8NDY3 354 aa14.27□□□□□ -0.12
UBR3-201ENST00000272793 OR52N4Q8NGI2 321 aa14.27□□□□□ -0.12
UBR3-201ENST00000272793 ARHGAP23Q9P227 1491 aa14.27□□□□□ -0.12
UBR3-201ENST00000272793 TCRBV3S1A0A5B6 114 aa14.27□□□□□ -0.12
UBR3-201ENST00000272793 TMEM262E9PQX1 116 aa14.27□□□□□ -0.12
UBR3-201ENST00000272793 CRHP06850 196 aa14.27□□□□□ -0.12
UBR3-201ENST00000272793 ASCL4Q6XD76 172 aa14.27□□□□□ -0.12
UBR3-201ENST00000272793 CHST8Q9H2A9 424 aa14.27□□□□□ -0.12
UBR3-201ENST00000272793 NWD2Q9ULI1 1742 aa14.27□□□□□ -0.13
UBR3-201ENST00000272793 PRKRAO75569 313 aaKnown RBP14.27□□□□□ -0.13
UBR3-201ENST00000272793 DRD1P21728 446 aa14.27□□□□□ -0.13
UBR3-201ENST00000272793 TMEM249Q2WGJ8 235 aa14.27□□□□□ -0.13
UBR3-201ENST00000272793 TMEM179BQ7Z7N9 219 aa14.27□□□□□ -0.13
UBR3-201ENST00000272793 CXorf67Q86X51 503 aaPredicted RBP14.27□□□□□ -0.13
UBR3-201ENST00000272793 MARCH1Q8TCQ1 289 aa14.27□□□□□ -0.13
UBR3-201ENST00000272793 RBKSQ9H477 322 aa14.27□□□□□ -0.13
UBR3-201ENST00000272793 MT-CO3P00414 261 aa14.27□□□□□ -0.13
UBR3-201ENST00000272793 APELAP0DMC3 54 aa14.27□□□□□ -0.13
UBR3-201ENST00000272793 PPP1CAP62136 330 aa14.27□□□□□ -0.13
UBR3-201ENST00000272793 SPATA46Q5T0L3 261 aa14.27□□□□□ -0.13
UBR3-201ENST00000272793 LIPNQ5VXI9 398 aa14.27□□□□□ -0.13
UBR3-201ENST00000272793 UBTD2Q8WUN7 234 aa14.27□□□□□ -0.13
UBR3-201ENST00000272793 SH2D2AQ9NP31 389 aa14.27□□□□□ -0.13
UBR3-201ENST00000272793 ZNF391Q9UJN7 358 aa14.27□□□□□ -0.13
UBR3-201ENST00000272793 A0A0U1RQF3 1178 aa14.27□□□□□ -0.13
UBR3-201ENST00000272793 RBFOX2O43251 390 aaKnown RBP eCLIP14.27□□□□□ -0.138e-10■■■■■ 29
UBR3-201ENST00000272793 CA3P07451 260 aa14.27□□□□□ -0.13
UBR3-201ENST00000272793 ARSAP15289 507 aa14.27□□□□□ -0.13
UBR3-201ENST00000272793 PKIAP61925 76 aa14.27□□□□□ -0.13
UBR3-201ENST00000272793 OPALINQ96PE5 141 aa14.27□□□□□ -0.13
UBR3-201ENST00000272793 MRIQ9BWK5 157 aa14.27□□□□□ -0.13
UBR3-201ENST00000272793 PSMB5P28074 263 aa14.26□□□□□ -0.13
UBR3-201ENST00000272793 ERASQ7Z444 233 aa14.26□□□□□ -0.13
UBR3-201ENST00000272793 OR52B4Q8NGK2 314 aa14.26□□□□□ -0.13
UBR3-201ENST00000272793 C12orf42Q96LP6 360 aa14.26□□□□□ -0.13
UBR3-201ENST00000272793 ZNF506Q5JVG8 444 aa14.26□□□□□ -0.13
UBR3-201ENST00000272793 RAB24Q969Q5 203 aa14.26□□□□□ -0.13
UBR3-201ENST00000272793 EGLN2Q96KS0 407 aa14.26□□□□□ -0.13
UBR3-201ENST00000272793 OR4A8P0C604 315 aa14.26□□□□□ -0.13
UBR3-201ENST00000272793 PRRX1P54821 245 aa14.26□□□□□ -0.13
UBR3-201ENST00000272793 MST1RQ04912 1400 aa14.26□□□□□ -0.13
UBR3-201ENST00000272793 NAT6Q93015 286 aa14.26□□□□□ -0.13
UBR3-201ENST00000272793 C2orf50Q96LR7 162 aa14.26□□□□□ -0.13
UBR3-201ENST00000272793 ALX4Q9H161 411 aaPredicted RBP14.26□□□□□ -0.13
UBR3-201ENST00000272793 MBLAC1A4D2B0 266 aaPredicted RBP14.26□□□□□ -0.13
UBR3-201ENST00000272793 FGF2P09038 288 aa14.26□□□□□ -0.13
UBR3-201ENST00000272793 NPBWR2P48146 333 aa14.26□□□□□ -0.13
UBR3-201ENST00000272793 ZNF137PP52743 207 aa14.26□□□□□ -0.13
UBR3-201ENST00000272793 PARS2Q7L3T8 475 aaKnown RBP14.26□□□□□ -0.13
UBR3-201ENST00000272793 Q8WTZ3 238 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms