RNA–Protein interactions for RNA: ENST00000269318.9

CCDC40-201, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2 BASIC

Gene CCDC40, Length 1,970 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-201ENST00000269318 CD163Q86VB7 1156 aa14.36□□□□□ -0.11
CCDC40-201ENST00000269318 OR56B2PQ8NGI1 322 aa14.36□□□□□ -0.11
CCDC40-201ENST00000269318 OR5M9Q8NGP3 310 aa14.36□□□□□ -0.11
CCDC40-201ENST00000269318 NANOS1Q8WY41 292 aaKnown RBP14.36□□□□□ -0.11
CCDC40-201ENST00000269318 FBXW5Q969U6 566 aa14.36□□□□□ -0.11
CCDC40-201ENST00000269318 POFUT1Q9H488 388 aa14.36□□□□□ -0.11
CCDC40-201ENST00000269318 MYOZ1Q9NP98 299 aaPredicted RBP14.36□□□□□ -0.11
CCDC40-201ENST00000269318 SLC7A11Q9UPY5 501 aa14.36□□□□□ -0.11
CCDC40-201ENST00000269318 PLEKHA6Q9Y2H5 1048 aa14.36□□□□□ -0.11
CCDC40-201ENST00000269318 STARD10Q9Y365 291 aa14.36□□□□□ -0.11
CCDC40-201ENST00000269318 AKAP13Q12802 2813 aa14.36□□□□□ -0.11
CCDC40-201ENST00000269318 IGKV1-12A0A0C4DH73 117 aa14.35□□□□□ -0.11
CCDC40-201ENST00000269318 TMEM82A0PJX8 343 aa14.35□□□□□ -0.11
CCDC40-201ENST00000269318 IGKV1D-12P01611 117 aa14.35□□□□□ -0.11
CCDC40-201ENST00000269318 SERPINA5P05154 406 aa14.35□□□□□ -0.11
CCDC40-201ENST00000269318 CSN2P05814 226 aa14.35□□□□□ -0.11
CCDC40-201ENST00000269318 IGHV1-2P23083 117 aa14.35□□□□□ -0.11
CCDC40-201ENST00000269318 WNT5AP41221 380 aa14.35□□□□□ -0.11
CCDC40-201ENST00000269318 ATP1B3P54709 279 aa14.35□□□□□ -0.11
CCDC40-201ENST00000269318 CXADRP78310 365 aa14.35□□□□□ -0.11
CCDC40-201ENST00000269318 MALLQ13021 153 aa14.35□□□□□ -0.11
CCDC40-201ENST00000269318 SCGB2B2Q4G0G5 96 aa14.35□□□□□ -0.11
CCDC40-201ENST00000269318 ATPAF1Q5TC12 328 aaPredicted RBP14.35□□□□□ -0.11
CCDC40-201ENST00000269318 MDP1Q86V88 176 aa14.35□□□□□ -0.11
CCDC40-201ENST00000269318 PXT1Q8NFP0 134 aa14.35□□□□□ -0.11
CCDC40-201ENST00000269318 RANBP3Q9H6Z4 567 aaPredicted RBP14.35□□□□□ -0.11
CCDC40-201ENST00000269318 CA10Q9NS85 328 aa14.35□□□□□ -0.11
CCDC40-201ENST00000269318 IL36GQ9NZH8 169 aa14.35□□□□□ -0.11
CCDC40-201ENST00000269318 CRIM1Q9NZV1 1036 aa14.35□□□□□ -0.11
CCDC40-201ENST00000269318 GPR160Q9UJ42 338 aa14.35□□□□□ -0.11
CCDC40-201ENST00000269318 ZNF850A8MQ14 1090 aa14.34□□□□□ -0.11
CCDC40-201ENST00000269318 SERPINE3A8MV23 424 aa14.34□□□□□ -0.11
CCDC40-201ENST00000269318 G3V3Q6 166 aa14.34□□□□□ -0.11
CCDC40-201ENST00000269318 ZNF780AO75290 641 aaPredicted RBP14.34□□□□□ -0.11
CCDC40-201ENST00000269318 CA11O75493 328 aa14.34□□□□□ -0.11
CCDC40-201ENST00000269318 PLATP00750 562 aa14.34□□□□□ -0.11
CCDC40-201ENST00000269318 CBX5P45973 191 aa14.34□□□□□ -0.11
CCDC40-201ENST00000269318 PDZK1IP1Q13113 114 aa14.34□□□□□ -0.11
CCDC40-201ENST00000269318 HLXQ14774 488 aaPredicted RBP14.34□□□□□ -0.11
CCDC40-201ENST00000269318 RSU1Q15404 277 aa14.34□□□□□ -0.11
CCDC40-201ENST00000269318 Q6ZS92 163 aa14.34□□□□□ -0.11
CCDC40-201ENST00000269318 NLRC3Q7RTR2 1065 aa14.34□□□□□ -0.11
CCDC40-201ENST00000269318 MRPL21Q7Z2W9 205 aaKnown RBP14.34□□□□□ -0.11
CCDC40-201ENST00000269318 MUC20Q8N307 709 aaPredicted RBP14.34□□□□□ -0.11
CCDC40-201ENST00000269318 C9orf106Q8NAJ2 232 aa14.34□□□□□ -0.11
CCDC40-201ENST00000269318 OR4K15Q8NH41 348 aa14.34□□□□□ -0.11
CCDC40-201ENST00000269318 WNT2BQ93097 391 aa14.34□□□□□ -0.11
CCDC40-201ENST00000269318 TMEM246Q9BRR3 403 aa14.34□□□□□ -0.11
CCDC40-201ENST00000269318 PTTG3PQ9NZH4 202 aa14.34□□□□□ -0.11
CCDC40-201ENST00000269318 MGAT4CQ9UBM8 478 aa14.34□□□□□ -0.11
CCDC40-201ENST00000269318 FAM186AA6NE01 2351 aa14.34□□□□□ -0.11
CCDC40-201ENST00000269318 ATP6V1G1O75348 118 aa14.34□□□□□ -0.11
CCDC40-201ENST00000269318 HTR3BO95264 441 aa14.34□□□□□ -0.11
CCDC40-201ENST00000269318 CST4P01036 141 aa14.34□□□□□ -0.11
CCDC40-201ENST00000269318 PDGFAP04085 211 aa14.34□□□□□ -0.11
CCDC40-201ENST00000269318 APLNRP35414 380 aa14.34□□□□□ -0.11
CCDC40-201ENST00000269318 KIR2DL2P43627 348 aaPredicted RBP14.34□□□□□ -0.11
CCDC40-201ENST00000269318 ARFRP1Q13795 201 aa14.34□□□□□ -0.11
CCDC40-201ENST00000269318 ARL6IP1Q15041 203 aa14.34□□□□□ -0.11
CCDC40-201ENST00000269318 MICBQ29980 383 aa14.34□□□□□ -0.11
CCDC40-201ENST00000269318 ACSF3Q4G176 576 aaPredicted RBP14.34□□□□□ -0.11
CCDC40-201ENST00000269318 SIGIRRQ6IA17 410 aa14.34□□□□□ -0.11
CCDC40-201ENST00000269318 NCCRP1Q6ZVX7 275 aaPredicted RBP14.34□□□□□ -0.11
CCDC40-201ENST00000269318 OR11H4Q8NGC9 324 aa14.34□□□□□ -0.11
CCDC40-201ENST00000269318 WBP1Q96G27 269 aa14.34□□□□□ -0.11
CCDC40-201ENST00000269318 PIPOXQ9P0Z9 390 aa14.34□□□□□ -0.11
CCDC40-201ENST00000269318 VSIG4Q9Y279 399 aa14.34□□□□□ -0.11
CCDC40-201ENST00000269318 PMP2P02689 132 aa14.33□□□□□ -0.12
CCDC40-201ENST00000269318 CSTBP04080 98 aaKnown RBP14.33□□□□□ -0.12
CCDC40-201ENST00000269318 GABRR1P24046 479 aa14.33□□□□□ -0.12
CCDC40-201ENST00000269318 VAX1Q5SQQ9 334 aa14.33□□□□□ -0.12
CCDC40-201ENST00000269318 Q6ZT83 130 aa14.33□□□□□ -0.12
CCDC40-201ENST00000269318 HOGA1Q86XE5 327 aa14.33□□□□□ -0.12
CCDC40-201ENST00000269318 C9orf62Q8N4C0 152 aa14.33□□□□□ -0.12
CCDC40-201ENST00000269318 PAPOLGQ9BWT3 736 aaKnown RBP14.33□□□□□ -0.12
CCDC40-201ENST00000269318 FGF23Q9GZV9 251 aaPredicted RBP14.33□□□□□ -0.12
CCDC40-201ENST00000269318 OPA3Q9H6K4 179 aa14.33□□□□□ -0.12
CCDC40-201ENST00000269318 EIF3KQ9UBQ5 218 aaKnown RBP14.33□□□□□ -0.12
CCDC40-201ENST00000269318 PQLC2LA1A4F0 135 aa14.33□□□□□ -0.12
CCDC40-201ENST00000269318 UBE2QL1A1L167 161 aa14.33□□□□□ -0.12
CCDC40-201ENST00000269318 FIGNL2A6NMB9 653 aa14.33□□□□□ -0.12
CCDC40-201ENST00000269318 AHRRA9YTQ3 701 aa14.33□□□□□ -0.12
CCDC40-201ENST00000269318 CNOT4O95628 575 aaKnown RBP14.33□□□□□ -0.12
CCDC40-201ENST00000269318 OR4E1P0C645 316 aa14.33□□□□□ -0.12
CCDC40-201ENST00000269318 ZNF14P17017 642 aaPredicted RBP14.33□□□□□ -0.12
CCDC40-201ENST00000269318 PRDX4Q13162 271 aa14.33□□□□□ -0.12
CCDC40-201ENST00000269318 PPA1Q15181 289 aa14.33□□□□□ -0.12
CCDC40-201ENST00000269318 ACTBL2Q562R1 376 aa14.33□□□□□ -0.12
CCDC40-201ENST00000269318 C6orf201Q7Z4U5 140 aa14.33□□□□□ -0.12
CCDC40-201ENST00000269318 CALHM1Q8IU99 346 aa14.33□□□□□ -0.12
CCDC40-201ENST00000269318 CSNK2A3Q8NEV1 391 aa14.33□□□□□ -0.12
CCDC40-201ENST00000269318 SLC30A7Q8NEW0 376 aa14.33□□□□□ -0.12
CCDC40-201ENST00000269318 ZNF431Q8TF32 576 aaPredicted RBP14.33□□□□□ -0.12
CCDC40-201ENST00000269318 CCDC107Q8WV48 283 aa14.33□□□□□ -0.12
CCDC40-201ENST00000269318 HPSE2Q8WWQ2 592 aa14.33□□□□□ -0.12
CCDC40-201ENST00000269318 OR2AT4A6NND4 320 aa14.32□□□□□ -0.12
CCDC40-201ENST00000269318 AKR7A2O43488 359 aa14.32□□□□□ -0.12
CCDC40-201ENST00000269318 OR2A4O95047 310 aa14.32□□□□□ -0.12
CCDC40-201ENST00000269318 SFTPBP07988 381 aa14.32□□□□□ -0.12
CCDC40-201ENST00000269318 TGFBR3Q03167 851 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms