RNA–Protein interactions for RNA: ENST00000267199.8

VPS33A-201, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33A, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-201ENST00000267199 SEMA7AO75326 666 aa10.31□□□□□ -0.76
VPS33A-201ENST00000267199 HOXC4P09017 264 aaPredicted RBP10.31□□□□□ -0.76
VPS33A-201ENST00000267199 ERVK-16P61578 105 aa10.31□□□□□ -0.76
VPS33A-201ENST00000267199 PMP22Q01453 160 aa10.31□□□□□ -0.76
VPS33A-201ENST00000267199 CLEC18BQ6UXF7 455 aa10.31□□□□□ -0.76
VPS33A-201ENST00000267199 ZNF66Q6ZN08 573 aa10.31□□□□□ -0.76
VPS33A-201ENST00000267199 MARVELD3Q96A59 401 aa10.31□□□□□ -0.76
VPS33A-201ENST00000267199 SLC25A38Q96DW6 304 aa10.31□□□□□ -0.76
VPS33A-201ENST00000267199 ZNF799Q96GE5 643 aa10.31□□□□□ -0.76
VPS33A-201ENST00000267199 MEGF10Q96KG7 1140 aa10.31□□□□□ -0.76
VPS33A-201ENST00000267199 MCTS1Q9ULC4 181 aaKnown RBP10.31□□□□□ -0.76
VPS33A-201ENST00000267199 TNFSF18Q9UNG2 199 aa10.31□□□□□ -0.76
VPS33A-201ENST00000267199 YBX2Q9Y2T7 364 aaKnown RBP10.31□□□□□ -0.76
VPS33A-201ENST00000267199 PATJQ8NI35 1801 aa10.3□□□□□ -0.76
VPS33A-201ENST00000267199 HS3ST1O14792 307 aa10.3□□□□□ -0.76
VPS33A-201ENST00000267199 YKT6O15498 198 aa10.3□□□□□ -0.76
VPS33A-201ENST00000267199 MT-CO2P00403 227 aa10.3□□□□□ -0.76
VPS33A-201ENST00000267199 HIST1H1DP16402 221 aaKnown RBP10.3□□□□□ -0.76
VPS33A-201ENST00000267199 RAB5AP20339 215 aa10.3□□□□□ -0.76
VPS33A-201ENST00000267199 FPR2P25090 351 aa10.3□□□□□ -0.76
VPS33A-201ENST00000267199 PRSS12P56730 875 aa10.3□□□□□ -0.76
VPS33A-201ENST00000267199 ZNF813Q6ZN06 617 aa10.3□□□□□ -0.76
VPS33A-201ENST00000267199 LDLRAD3Q86YD5 345 aa10.3□□□□□ -0.76
VPS33A-201ENST00000267199 OR13D1Q8NGV5 346 aa10.3□□□□□ -0.76
VPS33A-201ENST00000267199 RDH5Q92781 318 aa10.3□□□□□ -0.76
VPS33A-201ENST00000267199 YIF1AO95070 293 aa10.3□□□□□ -0.76
VPS33A-201ENST00000267199 RCC1P18754 421 aaPredicted RBP10.3□□□□□ -0.76
VPS33A-201ENST00000267199 GSK3AP49840 483 aa10.3□□□□□ -0.76
VPS33A-201ENST00000267199 RPS4XP62701 263 aaKnown RBP10.3□□□□□ -0.76
VPS33A-201ENST00000267199 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.3□□□□□ -0.76
VPS33A-201ENST00000267199 GGNBP1Q5YKI7 109 aa10.3□□□□□ -0.76
VPS33A-201ENST00000267199 FAM199XQ6PEV8 388 aaPredicted RBP10.3□□□□□ -0.76
VPS33A-201ENST00000267199 ZNF485Q8NCK3 441 aa10.3□□□□□ -0.76
VPS33A-201ENST00000267199 PGLYRP3Q96LB9 341 aa10.3□□□□□ -0.76
VPS33A-201ENST00000267199 SHARPINQ9H0F6 387 aa10.3□□□□□ -0.76
VPS33A-201ENST00000267199 PISDQ9UG56 409 aa10.3□□□□□ -0.76
VPS33A-201ENST00000267199 DTX4Q9Y2E6 619 aa10.3□□□□□ -0.76
VPS33A-201ENST00000267199 MGAMO43451 1857 aa10.3□□□□□ -0.76
VPS33A-201ENST00000267199 SDK2Q58EX2 2172 aa10.3□□□□□ -0.76
VPS33A-201ENST00000267199 ANKRD36A6QL64 1941 aa10.3□□□□□ -0.76
VPS33A-201ENST00000267199 CCDC187A0A096LP49 1063 aa10.3□□□□□ -0.76
VPS33A-201ENST00000267199 CDRT15L2A8MXV6 281 aa10.3□□□□□ -0.76
VPS33A-201ENST00000267199 HSBP1L1C9JCN9 74 aa10.3□□□□□ -0.76
VPS33A-201ENST00000267199 ZP1P60852 638 aa10.3□□□□□ -0.76
VPS33A-201ENST00000267199 ECH1Q13011 328 aa10.3□□□□□ -0.76
VPS33A-201ENST00000267199 TSPO2Q5TGU0 170 aa10.3□□□□□ -0.76
VPS33A-201ENST00000267199 NCR3LG1Q68D85 454 aa10.3□□□□□ -0.76
VPS33A-201ENST00000267199 MAML2Q8IZL2 1156 aaPredicted RBP10.3□□□□□ -0.76
VPS33A-201ENST00000267199 TMEM18Q96B42 140 aa10.3□□□□□ -0.76
VPS33A-201ENST00000267199 PIK3IP1Q96FE7 263 aa10.3□□□□□ -0.76
VPS33A-201ENST00000267199 REEP6Q96HR9 211 aa10.3□□□□□ -0.76
VPS33A-201ENST00000267199 EDEM2Q9BV94 578 aa10.3□□□□□ -0.76
VPS33A-201ENST00000267199 CDH20Q9HBT6 801 aa10.3□□□□□ -0.76
VPS33A-201ENST00000267199 SLCO1B1Q9Y6L6 691 aa10.3□□□□□ -0.76
VPS33A-201ENST00000267199 A0A087X0M5 115 aa10.29□□□□□ -0.76
VPS33A-201ENST00000267199 A0A1B0GX30 115 aa10.29□□□□□ -0.76
VPS33A-201ENST00000267199 FAM24AA6NFZ4 105 aa10.29□□□□□ -0.76
VPS33A-201ENST00000267199 C2CD4DB7Z1M9 353 aa10.29□□□□□ -0.76
VPS33A-201ENST00000267199 TGOLN2O43493 480 aa10.29□□□□□ -0.76
VPS33A-201ENST00000267199 TNFSF14O43557 240 aa10.29□□□□□ -0.76
VPS33A-201ENST00000267199 ABHD16AO95870 558 aa10.29□□□□□ -0.76
VPS33A-201ENST00000267199 RECKO95980 971 aa10.29□□□□□ -0.76
VPS33A-201ENST00000267199 MGST1P10620 155 aaKnown RBP10.29□□□□□ -0.76
VPS33A-201ENST00000267199 MUC1P15941 1255 aaPredicted RBP10.29□□□□□ -0.76
VPS33A-201ENST00000267199 OR3A4PP47883 348 aa10.29□□□□□ -0.76
VPS33A-201ENST00000267199 SULT1A1P50225 295 aa10.29□□□□□ -0.76
VPS33A-201ENST00000267199 CARD18P57730 90 aa10.29□□□□□ -0.76
VPS33A-201ENST00000267199 TFF2Q03403 129 aa10.29□□□□□ -0.76
VPS33A-201ENST00000267199 C19orf48Q6RUI8 117 aa10.29□□□□□ -0.76
VPS33A-201ENST00000267199 C6orf201Q7Z4U5 140 aa10.29□□□□□ -0.76
VPS33A-201ENST00000267199 CPT1CQ8TCG5 803 aa10.29□□□□□ -0.76
VPS33A-201ENST00000267199 VN1R1Q9GZP7 353 aa10.29□□□□□ -0.76
VPS33A-201ENST00000267199 KITLGP21583 273 aa10.29□□□□□ -0.76
VPS33A-201ENST00000267199 APLNRP35414 380 aa10.29□□□□□ -0.76
VPS33A-201ENST00000267199 NRIP2Q9BQI9 281 aa10.29□□□□□ -0.76
VPS33A-201ENST00000267199 MOB1AQ9H8S9 216 aa10.29□□□□□ -0.76
VPS33A-201ENST00000267199 V9GYS6 101 aa10.29□□□□□ -0.76
VPS33A-201ENST00000267199 CACNA1EQ15878 2313 aa10.29□□□□□ -0.76
VPS33A-201ENST00000267199 PTP4A3O75365 173 aa10.29□□□□□ -0.76
VPS33A-201ENST00000267199 GLB1P16278 677 aa10.29□□□□□ -0.76
VPS33A-201ENST00000267199 RAB4AP20338 218 aa10.29□□□□□ -0.76
VPS33A-201ENST00000267199 ACAA2P42765 397 aaKnown RBP10.29□□□□□ -0.76
VPS33A-201ENST00000267199 RPL29P47914 159 aaKnown RBP10.29□□□□□ -0.76
VPS33A-201ENST00000267199 DBX2Q6ZNG2 339 aa10.29□□□□□ -0.76
VPS33A-201ENST00000267199 Q7L0L9 218 aa10.29□□□□□ -0.76
VPS33A-201ENST00000267199 ZNF383Q8NA42 475 aa10.29□□□□□ -0.76
VPS33A-201ENST00000267199 SAT2Q96F10 170 aaPredicted RBP10.29□□□□□ -0.76
VPS33A-201ENST00000267199 FAM103A1Q9BTL3 118 aaKnown RBP10.29□□□□□ -0.76
VPS33A-201ENST00000267199 ZNF426Q9BUY5 554 aa10.29□□□□□ -0.76
VPS33A-201ENST00000267199 KLHDC2Q9Y2U9 406 aa10.29□□□□□ -0.76
VPS33A-201ENST00000267199 ARGFXA6NJG6 315 aa10.29□□□□□ -0.76
VPS33A-201ENST00000267199 ALG1L2C9J202 215 aa10.29□□□□□ -0.76
VPS33A-201ENST00000267199 H3BMH7 237 aa10.29□□□□□ -0.76
VPS33A-201ENST00000267199 RER1O15258 196 aa10.29□□□□□ -0.76
VPS33A-201ENST00000267199 SOCS1O15524 211 aa10.29□□□□□ -0.76
VPS33A-201ENST00000267199 CT45A8P0DMV1 189 aa10.29□□□□□ -0.76
VPS33A-201ENST00000267199 CT45A9P0DMV2 189 aa10.29□□□□□ -0.76
VPS33A-201ENST00000267199 CT45A2Q5DJT8 189 aa10.29□□□□□ -0.76
VPS33A-201ENST00000267199 ST3GAL6Q9Y274 331 aa10.29□□□□□ -0.76
VPS33A-201ENST00000267199 ICAM2P13598 275 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms