RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 HSF1Q00613 529 aa7.75□□□□□ -1.17
VAPB-201ENST00000265619 MFGE8Q08431 387 aaPredicted RBP7.75□□□□□ -1.17
VAPB-201ENST00000265619 TRMT12Q53H54 448 aaKnown RBP7.75□□□□□ -1.17
VAPB-201ENST00000265619 EIF5AL1Q6IS14 154 aaKnown RBP7.75□□□□□ -1.17
VAPB-201ENST00000265619 SPSB3Q6PJ21 355 aa7.75□□□□□ -1.17
VAPB-201ENST00000265619 FAM185AQ8N0U4 392 aa7.75□□□□□ -1.17
VAPB-201ENST00000265619 OR9A4Q8NGU2 314 aa7.75□□□□□ -1.17
VAPB-201ENST00000265619 OR1P1Q8NH06 330 aa7.75□□□□□ -1.17
VAPB-201ENST00000265619 TERB2Q8NHR7 220 aa7.75□□□□□ -1.17
VAPB-201ENST00000265619 FAM216AQ8WUB2 273 aa7.75□□□□□ -1.17
VAPB-201ENST00000265619 DNASE2BQ8WZ79 361 aa7.75□□□□□ -1.17
VAPB-201ENST00000265619 TSLPQ969D9 159 aa7.75□□□□□ -1.17
VAPB-201ENST00000265619 RCC1LQ96I51 464 aaKnown RBP7.75□□□□□ -1.17
VAPB-201ENST00000265619 C2orf50Q96LR7 162 aa7.75□□□□□ -1.17
VAPB-201ENST00000265619 MYOTQ9UBF9 498 aa7.75□□□□□ -1.17
VAPB-201ENST00000265619 MRPS2Q9Y399 296 aaKnown RBP7.75□□□□□ -1.17
VAPB-201ENST00000265619 PPIL1Q9Y3C6 166 aa7.75□□□□□ -1.17
VAPB-201ENST00000265619 ENTPD2Q9Y5L3 495 aa7.75□□□□□ -1.17
VAPB-201ENST00000265619 MAP1BP46821 2468 aaKnown RBP7.75□□□□□ -1.17
VAPB-201ENST00000265619 SDCBPO00560 298 aaPredicted RBP7.75□□□□□ -1.17
VAPB-201ENST00000265619 ERI3O43414 337 aaKnown RBP7.75□□□□□ -1.17
VAPB-201ENST00000265619 KIR2DL1P43626 348 aaPredicted RBP7.75□□□□□ -1.17
VAPB-201ENST00000265619 FAM189A2Q15884 450 aa7.75□□□□□ -1.17
VAPB-201ENST00000265619 PRAMEF8Q5VWM4 474 aa7.75□□□□□ -1.17
VAPB-201ENST00000265619 PRAMEF7Q5VXH5 474 aa7.75□□□□□ -1.17
VAPB-201ENST00000265619 TMEM225Q6GV28 225 aa7.75□□□□□ -1.17
VAPB-201ENST00000265619 SMRP1Q8NCR6 262 aa7.75□□□□□ -1.17
VAPB-201ENST00000265619 IFI44Q8TCB0 444 aa7.75□□□□□ -1.17
VAPB-201ENST00000265619 C22orf15Q8WYQ4 148 aa7.75□□□□□ -1.17
VAPB-201ENST00000265619 NICN1Q9BSH3 213 aa7.75□□□□□ -1.17
VAPB-201ENST00000265619 FGF22Q9HCT0 170 aa7.75□□□□□ -1.17
VAPB-201ENST00000265619 PITPNC1Q9UKF7 332 aa7.75□□□□□ -1.17
VAPB-201ENST00000265619 ZNF860A6NHJ4 632 aa7.75□□□□□ -1.17
VAPB-201ENST00000265619 ZNF264O43296 627 aa7.75□□□□□ -1.17
VAPB-201ENST00000265619 NXPH2O95156 264 aa7.75□□□□□ -1.17
VAPB-201ENST00000265619 GUSBP08236 651 aa7.75□□□□□ -1.17
VAPB-201ENST00000265619 IL6RP08887 468 aaPredicted RBP7.75□□□□□ -1.17
VAPB-201ENST00000265619 CEACAM1P13688 526 aa7.75□□□□□ -1.17
VAPB-201ENST00000265619 CLDN6P56747 220 aa7.75□□□□□ -1.17
VAPB-201ENST00000265619 CYCSP99999 105 aaKnown RBP7.75□□□□□ -1.17
VAPB-201ENST00000265619 UNC119Q13432 240 aa7.75□□□□□ -1.17
VAPB-201ENST00000265619 PMS2P11Q13670 270 aa7.75□□□□□ -1.17
VAPB-201ENST00000265619 FAM53BQ14153 422 aa7.75□□□□□ -1.17
VAPB-201ENST00000265619 TMEM176BQ3YBM2 270 aaPredicted RBP7.75□□□□□ -1.17
VAPB-201ENST00000265619 TMEM128Q5BJH2 165 aa7.75□□□□□ -1.17
VAPB-201ENST00000265619 PLPP5Q8NEB5 264 aa7.75□□□□□ -1.17
VAPB-201ENST00000265619 OR6N2Q8NGY6 317 aa7.75□□□□□ -1.17
VAPB-201ENST00000265619 MRGPRX1Q96LB2 322 aa7.75□□□□□ -1.17
VAPB-201ENST00000265619 C4orf45Q96LM5 186 aa7.75□□□□□ -1.17
VAPB-201ENST00000265619 CCNL2Q96S94 520 aaPredicted RBP7.75□□□□□ -1.17
VAPB-201ENST00000265619 GINS3Q9BRX5 216 aa7.75□□□□□ -1.17
VAPB-201ENST00000265619 RAB18Q9NP72 206 aa7.75□□□□□ -1.17
VAPB-201ENST00000265619 FOXJ2Q9P0K8 574 aa7.75□□□□□ -1.17
VAPB-201ENST00000265619 GPR132Q9UNW8 380 aa7.75□□□□□ -1.17
VAPB-201ENST00000265619 ARHGAP21Q5T5U3 1957 aa7.74□□□□□ -1.17
VAPB-201ENST00000265619 A0A0B4J2E0 115 aa7.74□□□□□ -1.17
VAPB-201ENST00000265619 A0A1B0GX12 115 aa7.74□□□□□ -1.17
VAPB-201ENST00000265619 A0A1W2PPV9 198 aa7.74□□□□□ -1.17
VAPB-201ENST00000265619 XKRY2A2RUG3 117 aa7.74□□□□□ -1.17
VAPB-201ENST00000265619 RBFOX3A6NFN3 312 aa7.74□□□□□ -1.17
VAPB-201ENST00000265619 TLCD2A6NGC4 264 aa7.74□□□□□ -1.17
VAPB-201ENST00000265619 XKRYO14609 159 aa7.74□□□□□ -1.17
VAPB-201ENST00000265619 GALR2O43603 387 aaPredicted RBP7.74□□□□□ -1.17
VAPB-201ENST00000265619 SLC35G6P0C7Q6 338 aa7.74□□□□□ -1.17
VAPB-201ENST00000265619 NID1P14543 1247 aa7.74□□□□□ -1.17
VAPB-201ENST00000265619 PTTG1IPP53801 180 aa7.74□□□□□ -1.17
VAPB-201ENST00000265619 FAM220AQ7Z4H9 259 aa7.74□□□□□ -1.17
VAPB-201ENST00000265619 P4HA3Q7Z4N8 544 aa7.74□□□□□ -1.17
VAPB-201ENST00000265619 OR1L6Q8NGR2 347 aa7.74□□□□□ -1.17
VAPB-201ENST00000265619 HIST1H2AAQ96QV6 131 aa7.74□□□□□ -1.17
VAPB-201ENST00000265619 ZNF700Q9H0M5 742 aa7.74□□□□□ -1.17
VAPB-201ENST00000265619 DPEP2Q9H4A9 486 aa7.74□□□□□ -1.17
VAPB-201ENST00000265619 GPR34Q9UPC5 381 aa7.74□□□□□ -1.17
VAPB-201ENST00000265619 RNF115Q9Y4L5 304 aa7.74□□□□□ -1.17
VAPB-201ENST00000265619 JTBO76095 146 aa7.74□□□□□ -1.17
VAPB-201ENST00000265619 ADH1BP00325 375 aa7.74□□□□□ -1.17
VAPB-201ENST00000265619 CRYABP02511 175 aaKnown RBP7.74□□□□□ -1.17
VAPB-201ENST00000265619 TK1P04183 234 aa7.74□□□□□ -1.17
VAPB-201ENST00000265619 AKT2P31751 481 aa7.74□□□□□ -1.17
VAPB-201ENST00000265619 RPS21P63220 83 aaKnown RBP7.74□□□□□ -1.17
VAPB-201ENST00000265619 EIF5AP63241 154 aaKnown RBP7.74□□□□□ -1.17
VAPB-201ENST00000265619 ZFP36L1Q07352 338 aaKnown RBP7.74□□□□□ -1.17
VAPB-201ENST00000265619 DUSP8Q13202 625 aa7.74□□□□□ -1.17
VAPB-201ENST00000265619 RNF151Q2KHN1 245 aa7.74□□□□□ -1.17
VAPB-201ENST00000265619 C1QL3Q5VWW1 255 aa7.74□□□□□ -1.17
VAPB-201ENST00000265619 FAHD2BQ6P2I3 314 aaPredicted RBP7.74□□□□□ -1.17
VAPB-201ENST00000265619 TMEM184AQ6ZMB5 413 aa7.74□□□□□ -1.17
VAPB-201ENST00000265619 PEG10Q86TG7 708 aaKnown RBP7.74□□□□□ -1.17
VAPB-201ENST00000265619 C11orf42Q8N5U0 333 aa7.74□□□□□ -1.17
VAPB-201ENST00000265619 RSC1A1Q92681 617 aa7.74□□□□□ -1.17
VAPB-201ENST00000265619 UBE2E3Q969T4 207 aa7.74□□□□□ -1.17
VAPB-201ENST00000265619 FAHD2AQ96GK7 314 aa7.74□□□□□ -1.17
VAPB-201ENST00000265619 TRIM2Q9C040 744 aa7.74□□□□□ -1.17
VAPB-201ENST00000265619 UBE2ZQ9H832 354 aaPredicted RBP7.74□□□□□ -1.17
VAPB-201ENST00000265619 CDH20Q9HBT6 801 aa7.74□□□□□ -1.17
VAPB-201ENST00000265619 B9D1Q9UPM9 204 aa7.74□□□□□ -1.17
VAPB-201ENST00000265619 RHBDD3Q9Y3P4 386 aa7.74□□□□□ -1.17
VAPB-201ENST00000265619 PHF3Q92576 2039 aaKnown RBP7.74□□□□□ -1.17
VAPB-201ENST00000265619 A0A087WWC5 75 aa7.74□□□□□ -1.17
VAPB-201ENST00000265619 TAAR5O14804 337 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms