RNA–Protein interactions for RNA: ENST00000263666.8

PDZRN3-201, Transcript of PDZ domain containing ring finger 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZRN3, Length 4,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-201ENST00000263666 RTN4IP1Q8WWV3 396 aaPredicted RBP14.29□□□□□ -0.12
PDZRN3-201ENST00000263666 MVB12AQ96EY5 273 aa14.29□□□□□ -0.12
PDZRN3-201ENST00000263666 OR10C1Q96KK4 312 aa14.29□□□□□ -0.12
PDZRN3-201ENST00000263666 ESRP2Q9H6T0 727 aaKnown RBP14.29□□□□□ -0.12
PDZRN3-201ENST00000263666 ZNF407Q9C0G0 2248 aa14.29□□□□□ -0.12
PDZRN3-201ENST00000263666 RNASEK-C17orf49H0YIS7 233 aa14.29□□□□□ -0.12
PDZRN3-201ENST00000263666 ONECUT2O95948 504 aa14.29□□□□□ -0.12
PDZRN3-201ENST00000263666 ARG1P05089 322 aa14.29□□□□□ -0.12
PDZRN3-201ENST00000263666 FGF2P09038 288 aa14.29□□□□□ -0.12
PDZRN3-201ENST00000263666 GDF1P27539 372 aa14.29□□□□□ -0.12
PDZRN3-201ENST00000263666 TCEAL6Q6IPX3 200 aa14.29□□□□□ -0.12
PDZRN3-201ENST00000263666 C5orf46Q6UWT4 87 aa14.29□□□□□ -0.12
PDZRN3-201ENST00000263666 OR51H1Q8NH63 302 aa14.29□□□□□ -0.12
PDZRN3-201ENST00000263666 ZNF519Q8TB69 540 aa14.29□□□□□ -0.12
PDZRN3-201ENST00000263666 SYT3Q9BQG1 590 aa14.29□□□□□ -0.12
PDZRN3-201ENST00000263666 WIF1Q9Y5W5 379 aa14.29□□□□□ -0.12
PDZRN3-201ENST00000263666 FER1L5A0AVI2 2057 aa14.29□□□□□ -0.12
PDZRN3-201ENST00000263666 CXCL13O43927 109 aa14.28□□□□□ -0.12
PDZRN3-201ENST00000263666 TIAF1O95411 115 aa14.28□□□□□ -0.12
PDZRN3-201ENST00000263666 FLI1Q01543 452 aaPredicted RBP14.28□□□□□ -0.12
PDZRN3-201ENST00000263666 ABHD17BQ5VST6 288 aa14.28□□□□□ -0.12
PDZRN3-201ENST00000263666 C1QL2Q7Z5L3 287 aa14.28□□□□□ -0.12
PDZRN3-201ENST00000263666 SLC38A9Q8NBW4 561 aa14.28□□□□□ -0.12
PDZRN3-201ENST00000263666 C12orf10Q9HB07 376 aa14.28□□□□□ -0.12
PDZRN3-201ENST00000263666 MYOTQ9UBF9 498 aa14.28□□□□□ -0.12
PDZRN3-201ENST00000263666 PURGQ9UJV8 347 aaKnown RBP14.28□□□□□ -0.12
PDZRN3-201ENST00000263666 CD1AP06126 327 aa14.28□□□□□ -0.12
PDZRN3-201ENST00000263666 S100GP29377 79 aa14.28□□□□□ -0.12
PDZRN3-201ENST00000263666 ZNF674Q2M3X9 581 aa14.28□□□□□ -0.12
PDZRN3-201ENST00000263666 ETV3LQ6ZN32 361 aa14.28□□□□□ -0.12
PDZRN3-201ENST00000263666 ZDHHC22Q8N966 263 aa14.28□□□□□ -0.12
PDZRN3-201ENST00000263666 MRPL24Q96A35 216 aaKnown RBP14.28□□□□□ -0.12
PDZRN3-201ENST00000263666 CCDC74BQ96LY2 380 aa14.28□□□□□ -0.12
PDZRN3-201ENST00000263666 ZNF385AQ96PM9 386 aaKnown RBP14.28□□□□□ -0.12
PDZRN3-201ENST00000263666 SUCNR1Q9BXA5 334 aa14.28□□□□□ -0.12
PDZRN3-201ENST00000263666 LPAR5Q9H1C0 372 aa14.28□□□□□ -0.12
PDZRN3-201ENST00000263666 ATPIF1Q9UII2 106 aa14.28□□□□□ -0.12
PDZRN3-201ENST00000263666 M0R296 226 aa14.28□□□□□ -0.12
PDZRN3-201ENST00000263666 HSD17B6O14756 317 aa14.28□□□□□ -0.12
PDZRN3-201ENST00000263666 EPHA8P29322 1005 aaPredicted RBP14.28□□□□□ -0.12
PDZRN3-201ENST00000263666 MIDNQ504T8 468 aa14.28□□□□□ -0.12
PDZRN3-201ENST00000263666 ZNF774Q6NX45 483 aa14.28□□□□□ -0.12
PDZRN3-201ENST00000263666 OVCH2Q7RTZ1 564 aa14.28□□□□□ -0.12
PDZRN3-201ENST00000263666 ZFP62Q8NB50 900 aaPredicted RBP14.28□□□□□ -0.12
PDZRN3-201ENST00000263666 OR9K2Q8NGE7 335 aa14.28□□□□□ -0.12
PDZRN3-201ENST00000263666 HSPB2A8KAH6 182 aa14.27□□□□□ -0.12
PDZRN3-201ENST00000263666 SFT2D2O95562 160 aa14.27□□□□□ -0.12
PDZRN3-201ENST00000263666 IGKV3-11P04433 115 aa14.27□□□□□ -0.12
PDZRN3-201ENST00000263666 HSPB2Q16082 182 aa14.27□□□□□ -0.12
PDZRN3-201ENST00000263666 ZSCAN4Q8NAM6 433 aaPredicted RBP14.27□□□□□ -0.12
PDZRN3-201ENST00000263666 FAM212BQ9NTI7 297 aaPredicted RBP14.27□□□□□ -0.12
PDZRN3-201ENST00000263666 UQCC1Q9NVA1 299 aa14.27□□□□□ -0.12
PDZRN3-201ENST00000263666 PRELID3BQ9Y3B1 194 aa14.27□□□□□ -0.12
PDZRN3-201ENST00000263666 SHANK1Q9Y566 2161 aa14.27□□□□□ -0.12
PDZRN3-201ENST00000263666 TRIM77I1YAP6 450 aa14.27□□□□□ -0.12
PDZRN3-201ENST00000263666 SSBP1Q04837 148 aaKnown RBP14.27□□□□□ -0.12
PDZRN3-201ENST00000263666 ZNF813Q6ZN06 617 aa14.27□□□□□ -0.12
PDZRN3-201ENST00000263666 SUMF2Q8NBJ7 301 aa14.27□□□□□ -0.12
PDZRN3-201ENST00000263666 PIK3IP1Q96FE7 263 aa14.27□□□□□ -0.12
PDZRN3-201ENST00000263666 SHARPINQ9H0F6 387 aa14.27□□□□□ -0.12
PDZRN3-201ENST00000263666 CALHM2Q9HA72 323 aa14.27□□□□□ -0.12
PDZRN3-201ENST00000263666 LUZP4Q9P127 313 aa14.27□□□□□ -0.12
PDZRN3-201ENST00000263666 GSTP1P09211 210 aaKnown RBP14.27□□□□□ -0.13
PDZRN3-201ENST00000263666 MMP16P51512 607 aa14.27□□□□□ -0.13
PDZRN3-201ENST00000263666 ROM1Q03395 351 aa14.27□□□□□ -0.13
PDZRN3-201ENST00000263666 CLEC12BQ2HXU8 276 aa14.27□□□□□ -0.13
PDZRN3-201ENST00000263666 ANKRD55Q3KP44 614 aa14.27□□□□□ -0.13
PDZRN3-201ENST00000263666 ACTBL2Q562R1 376 aa14.27□□□□□ -0.13
PDZRN3-201ENST00000263666 DTWD2Q8NBA8 298 aa14.27□□□□□ -0.13
PDZRN3-201ENST00000263666 OXGR1Q96P68 337 aa14.27□□□□□ -0.13
PDZRN3-201ENST00000263666 CRLF2Q9HC73 371 aa14.27□□□□□ -0.13
PDZRN3-201ENST00000263666 MMP24Q9Y5R2 645 aa14.27□□□□□ -0.13
PDZRN3-201ENST00000263666 RNF222A6NCQ9 220 aa14.26□□□□□ -0.13
PDZRN3-201ENST00000263666 PJVKQ0ZLH3 352 aa14.26□□□□□ -0.13
PDZRN3-201ENST00000263666 TMEM268Q5VZI3 342 aa14.26□□□□□ -0.13
PDZRN3-201ENST00000263666 PLXDC2Q6UX71 529 aa14.26□□□□□ -0.13
PDZRN3-201ENST00000263666 SLC25A26Q70HW3 274 aa14.26□□□□□ -0.13
PDZRN3-201ENST00000263666 TCEAL3Q969E4 200 aa14.26□□□□□ -0.13
PDZRN3-201ENST00000263666 ZFP57Q9NU63 452 aa14.26□□□□□ -0.13
PDZRN3-201ENST00000263666 RCL1Q9Y2P8 373 aaKnown RBP14.26□□□□□ -0.13
PDZRN3-201ENST00000263666 PRR19A6NJB7 356 aa14.26□□□□□ -0.13
PDZRN3-201ENST00000263666 DHHO43323 396 aa14.26□□□□□ -0.13
PDZRN3-201ENST00000263666 SPP1P10451 314 aa14.26□□□□□ -0.13
PDZRN3-201ENST00000263666 TMEM33P57088 247 aa14.26□□□□□ -0.13
PDZRN3-201ENST00000263666 RPS19BP1Q86WX3 136 aaKnown RBP14.26□□□□□ -0.13
PDZRN3-201ENST00000263666 LDLRAD3Q86YD5 345 aa14.26□□□□□ -0.13
PDZRN3-201ENST00000263666 S100PBPQ96BU1 408 aa14.26□□□□□ -0.13
PDZRN3-201ENST00000263666 SPACA9Q96E40 222 aaPredicted RBP14.26□□□□□ -0.13
PDZRN3-201ENST00000263666 EDEM2Q9BV94 578 aa14.26□□□□□ -0.13
PDZRN3-201ENST00000263666 ST3GAL6Q9Y274 331 aa14.26□□□□□ -0.13
PDZRN3-201ENST00000263666 SZT2Q5T011 3432 aa14.26□□□□□ -0.13
PDZRN3-201ENST00000263666 OBSL1O75147 1896 aa14.26□□□□□ -0.13
PDZRN3-201ENST00000263666 ACTL6AO96019 429 aa14.26□□□□□ -0.13
PDZRN3-201ENST00000263666 CRYBA1P05813 215 aa14.26□□□□□ -0.13
PDZRN3-201ENST00000263666 CHCHD2P9Q5T1J5 151 aaPredicted RBP14.26□□□□□ -0.13
PDZRN3-201ENST00000263666 GGNBP1Q5YKI7 109 aa14.26□□□□□ -0.13
PDZRN3-201ENST00000263666 OR52H1Q8NGJ2 320 aa14.26□□□□□ -0.13
PDZRN3-201ENST00000263666 LIPHQ8WWY8 451 aa14.26□□□□□ -0.13
PDZRN3-201ENST00000263666 RDH5Q92781 318 aa14.26□□□□□ -0.13
PDZRN3-201ENST00000263666 MRGPRX4Q96LA9 322 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms