RNA–Protein interactions for RNA: ENST00000262327.9

LIG3-201, Transcript of DNA ligase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LIG3, Length 3,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-201ENST00000262327 SSX2Q16385 188 aa8.84□□□□□ -0.99
LIG3-201ENST00000262327 TMEM176BQ3YBM2 270 aaPredicted RBP8.84□□□□□ -0.99
LIG3-201ENST00000262327 CCDC157Q569K6 752 aa8.84□□□□□ -0.99
LIG3-201ENST00000262327 BRICD5Q6PL45 260 aa8.84□□□□□ -0.99
LIG3-201ENST00000262327 DEGS2Q6QHC5 323 aa8.84□□□□□ -0.99
LIG3-201ENST00000262327 POC1BQ8TC44 478 aa8.84□□□□□ -0.99
LIG3-201ENST00000262327 METTL7AQ9H8H3 244 aa8.84□□□□□ -0.99
LIG3-201ENST00000262327 AKIRIN1Q9H9L7 192 aaPredicted RBP8.84□□□□□ -0.99
LIG3-201ENST00000262327 ZNF107Q9UII5 783 aaPredicted RBP8.84□□□□□ -0.99
LIG3-201ENST00000262327 FRYQ5TBA9 3013 aa8.84□□□□□ -0.99
LIG3-201ENST00000262327 A0A1B0GV50 99 aa8.84□□□□□ -0.99
LIG3-201ENST00000262327 ZNF878C9JN71 531 aa8.84□□□□□ -0.99
LIG3-201ENST00000262327 DUX1O43812 170 aa8.84□□□□□ -0.99
LIG3-201ENST00000262327 GDF9O60383 454 aa8.84□□□□□ -0.99
LIG3-201ENST00000262327 OR2J2O76002 312 aa8.84□□□□□ -0.99
LIG3-201ENST00000262327 SFT2D2O95562 160 aa8.84□□□□□ -0.99
LIG3-201ENST00000262327 FAHP16930 419 aa8.84□□□□□ -0.99
LIG3-201ENST00000262327 GABRR1P24046 479 aa8.84□□□□□ -0.99
LIG3-201ENST00000262327 APOBEC1P41238 236 aaKnown RBP8.84□□□□□ -0.99
LIG3-201ENST00000262327 LPAR6P43657 344 aa8.84□□□□□ -0.99
LIG3-201ENST00000262327 ZNF41P51814 821 aaPredicted RBP8.84□□□□□ -0.99
LIG3-201ENST00000262327 AADACL3Q5VUY0 350 aa8.84□□□□□ -0.99
LIG3-201ENST00000262327 PLXDC1Q8IUK5 500 aa8.84□□□□□ -0.99
LIG3-201ENST00000262327 BATF2Q8N1L9 274 aa8.84□□□□□ -0.99
LIG3-201ENST00000262327 CDC6Q99741 560 aa8.84□□□□□ -0.99
LIG3-201ENST00000262327 SEBOXQ9HB31 216 aaPredicted RBP8.84□□□□□ -0.99
LIG3-201ENST00000262327 UQCC1Q9NVA1 299 aa8.84□□□□□ -0.99
LIG3-201ENST00000262327 PCDHGA1Q9Y5H4 931 aa8.84□□□□□ -0.99
LIG3-201ENST00000262327 C9JQL5 133 aa8.83□□□□□ -1
LIG3-201ENST00000262327 MED6O75586 246 aa8.83□□□□□ -1
LIG3-201ENST00000262327 DBHP09172 617 aa8.83□□□□□ -1
LIG3-201ENST00000262327 COX5BP10606 129 aa8.83□□□□□ -1
LIG3-201ENST00000262327 CD79AP11912 226 aa8.83□□□□□ -1
LIG3-201ENST00000262327 ZP4Q12836 540 aa8.83□□□□□ -1
LIG3-201ENST00000262327 C6orf201Q7Z4U5 140 aa8.83□□□□□ -1
LIG3-201ENST00000262327 AKR7LQ8NHP1 331 aa8.83□□□□□ -1
LIG3-201ENST00000262327 KCNG3Q8TAE7 436 aa8.83□□□□□ -1
LIG3-201ENST00000262327 ZNF501Q96CX3 271 aaPredicted RBP8.83□□□□□ -1
LIG3-201ENST00000262327 FBXO17Q96EF6 278 aa8.83□□□□□ -1
LIG3-201ENST00000262327 MVB12AQ96EY5 273 aa8.83□□□□□ -1
LIG3-201ENST00000262327 MRPL13Q9BYD1 178 aaKnown RBP8.83□□□□□ -1
LIG3-201ENST00000262327 NMES1Q9C002 83 aa8.83□□□□□ -1
LIG3-201ENST00000262327 RHOFQ9HBH0 211 aa8.83□□□□□ -1
LIG3-201ENST00000262327 SEMA5BQ9P283 1151 aa8.83□□□□□ -1
LIG3-201ENST00000262327 OR5H15A6NDH6 313 aa8.83□□□□□ -1
LIG3-201ENST00000262327 F8VVB4 439 aa8.83□□□□□ -1
LIG3-201ENST00000262327 F8VWA3 439 aa8.83□□□□□ -1
LIG3-201ENST00000262327 SLC31A2O15432 143 aa8.83□□□□□ -1
LIG3-201ENST00000262327 PGA4P0DJD7 388 aa8.83□□□□□ -1
LIG3-201ENST00000262327 PGA3P0DJD8 388 aa8.83□□□□□ -1
LIG3-201ENST00000262327 CD80P33681 288 aa8.83□□□□□ -1
LIG3-201ENST00000262327 SPCS3P61009 180 aa8.83□□□□□ -1
LIG3-201ENST00000262327 TGIF1Q15583 401 aa8.83□□□□□ -1
LIG3-201ENST00000262327 SP6Q3SY56 376 aa8.83□□□□□ -1
LIG3-201ENST00000262327 WDR74Q6RFH5 385 aaPredicted RBP8.83□□□□□ -1
LIG3-201ENST00000262327 ANKRD37Q7Z713 158 aa8.83□□□□□ -1
LIG3-201ENST00000262327 C20orf196Q8IYI0 205 aa8.83□□□□□ -1
LIG3-201ENST00000262327 D2HGDHQ8N465 521 aa8.83□□□□□ -1
LIG3-201ENST00000262327 SLC30A7Q8NEW0 376 aa8.83□□□□□ -1
LIG3-201ENST00000262327 RXFP4Q8TDU9 374 aa8.83□□□□□ -1
LIG3-201ENST00000262327 OIT3Q8WWZ8 545 aa8.83□□□□□ -1
LIG3-201ENST00000262327 ST8SIA1Q92185 356 aa8.83□□□□□ -1
LIG3-201ENST00000262327 DYRK2Q92630 601 aa8.83□□□□□ -1
LIG3-201ENST00000262327 RHOVQ96L33 236 aa8.83□□□□□ -1
LIG3-201ENST00000262327 ALKBH4Q9NXW9 302 aa8.83□□□□□ -1
LIG3-201ENST00000262327 SRPK3Q9UPE1 567 aa8.83□□□□□ -1
LIG3-201ENST00000262327 LSM5Q9Y4Y9 91 aaKnown RBP8.83□□□□□ -1
LIG3-201ENST00000262327 FAM221AA4D161 298 aa8.82□□□□□ -1
LIG3-201ENST00000262327 IGHG1P01857 330 aa8.82□□□□□ -1
LIG3-201ENST00000262327 RRADP55042 308 aa8.82□□□□□ -1
LIG3-201ENST00000262327 CLDN17P56750 224 aa8.82□□□□□ -1
LIG3-201ENST00000262327 PDZK1IP1Q13113 114 aa8.82□□□□□ -1
LIG3-201ENST00000262327 FAHD2BQ6P2I3 314 aaPredicted RBP8.82□□□□□ -1
LIG3-201ENST00000262327 KMT5CQ86Y97 462 aa8.82□□□□□ -1
LIG3-201ENST00000262327 SPAG16Q8N0X2 631 aa8.82□□□□□ -1
LIG3-201ENST00000262327 NOXO1Q8NFA2 376 aa8.82□□□□□ -1
LIG3-201ENST00000262327 FAHD2AQ96GK7 314 aa8.82□□□□□ -1
LIG3-201ENST00000262327 PGAM5Q96HS1 289 aa8.82□□□□□ -1
LIG3-201ENST00000262327 OR10A2Q9H208 303 aa8.82□□□□□ -1
LIG3-201ENST00000262327 PLA2G2EQ9NZK7 142 aa8.82□□□□□ -1
LIG3-201ENST00000262327 B3GALT5Q9Y2C3 310 aa8.82□□□□□ -1
LIG3-201ENST00000262327 EML6Q6ZMW3 1958 aa8.82□□□□□ -1
LIG3-201ENST00000262327 MEX3AA1L020 520 aaKnown RBP8.82□□□□□ -1
LIG3-201ENST00000262327 MASP2O00187 686 aa8.82□□□□□ -1
LIG3-201ENST00000262327 TRAF3IP2O43734 574 aaPredicted RBP8.82□□□□□ -1
LIG3-201ENST00000262327 ANGPTL7O43827 346 aa8.82□□□□□ -1
LIG3-201ENST00000262327 HPNP05981 417 aa8.82□□□□□ -1
LIG3-201ENST00000262327 CHRM2P08172 466 aa8.82□□□□□ -1
LIG3-201ENST00000262327 CELA2AP08217 269 aa8.82□□□□□ -1
LIG3-201ENST00000262327 FCGR2AP12318 317 aa8.82□□□□□ -1
LIG3-201ENST00000262327 ZNF43P17038 809 aa8.82□□□□□ -1
LIG3-201ENST00000262327 OPRM1P35372 400 aa8.82□□□□□ -1
LIG3-201ENST00000262327 TAS2R31P59538 309 aa8.82□□□□□ -1
LIG3-201ENST00000262327 ECH1Q13011 328 aa8.82□□□□□ -1
LIG3-201ENST00000262327 PDCD1Q15116 288 aa8.82□□□□□ -1
LIG3-201ENST00000262327 KISS1Q15726 138 aa8.82□□□□□ -1
LIG3-201ENST00000262327 TRIM61Q5EBN2 209 aa8.82□□□□□ -1
LIG3-201ENST00000262327 PRSS54Q6PEW0 395 aa8.82□□□□□ -1
LIG3-201ENST00000262327 UQCC3Q6UW78 93 aa8.82□□□□□ -1
LIG3-201ENST00000262327 STOML3Q8TAV4 291 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms