RNA–Protein interactions for RNA: ENST00000261799.8

PDGFRB-201, Transcript of platelet derived growth factor receptor beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRB, Length 5,717 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-201ENST00000261799 OR2W3Q7Z3T1 314 aa12.06□□□□□ -0.48
PDGFRB-201ENST00000261799 CCDC28AQ8IWP9 274 aa12.06□□□□□ -0.48
PDGFRB-201ENST00000261799 CISD1Q9NZ45 108 aaKnown RBP12.06□□□□□ -0.48
PDGFRB-201ENST00000261799 PPIAL4EA0A075B759 164 aa12.06□□□□□ -0.48
PDGFRB-201ENST00000261799 ZNF320A2RRD8 509 aa12.06□□□□□ -0.48
PDGFRB-201ENST00000261799 PPIAL4DF5H284 164 aa12.06□□□□□ -0.48
PDGFRB-201ENST00000261799 GPR31O00270 319 aa12.06□□□□□ -0.48
PDGFRB-201ENST00000261799 PPIAL4FP0DN26 164 aa12.06□□□□□ -0.48
PDGFRB-201ENST00000261799 VDAC1P21796 283 aa12.06□□□□□ -0.48
PDGFRB-201ENST00000261799 P2RY6Q15077 328 aa12.06□□□□□ -0.48
PDGFRB-201ENST00000261799 SLC25A35Q3KQZ1 300 aa12.06□□□□□ -0.48
PDGFRB-201ENST00000261799 DESI1Q6ICB0 168 aa12.06□□□□□ -0.48
PDGFRB-201ENST00000261799 SLC22A18ASQ8N1D0 253 aa12.06□□□□□ -0.48
PDGFRB-201ENST00000261799 OR2G2Q8NGZ5 317 aa12.06□□□□□ -0.48
PDGFRB-201ENST00000261799 SF3B6Q9Y3B4 125 aaKnown RBP12.06□□□□□ -0.48
PDGFRB-201ENST00000261799 PPIAL4AQ9Y536 164 aa12.06□□□□□ -0.48
PDGFRB-201ENST00000261799 FCGR3BO75015 233 aa12.06□□□□□ -0.48
PDGFRB-201ENST00000261799 CT62P0C5K7 136 aa12.06□□□□□ -0.48
PDGFRB-201ENST00000261799 SPINK2P20155 84 aa12.06□□□□□ -0.48
PDGFRB-201ENST00000261799 PTBP1P26599 531 aaKnown RBP eCLIP12.06□□□□□ -0.484e-7■■□□□ 12.5
PDGFRB-201ENST00000261799 ERVFRD-1P60508 538 aa12.06□□□□□ -0.48
PDGFRB-201ENST00000261799 HMGN3Q15651 99 aa12.06□□□□□ -0.48
PDGFRB-201ENST00000261799 KCNMB1Q16558 191 aa12.06□□□□□ -0.48
PDGFRB-201ENST00000261799 STAC2Q6ZMT1 411 aa12.06□□□□□ -0.48
PDGFRB-201ENST00000261799 FAM181AQ8N9Y4 354 aa12.06□□□□□ -0.48
PDGFRB-201ENST00000261799 OR2G3Q8NGZ4 309 aa12.06□□□□□ -0.48
PDGFRB-201ENST00000261799 IL36GQ9NZH8 169 aa12.06□□□□□ -0.48
PDGFRB-201ENST00000261799 MYH15Q9Y2K3 1946 aa12.05□□□□□ -0.48
PDGFRB-201ENST00000261799 SIPA1L3O60292 1781 aaPredicted RBP12.05□□□□□ -0.48
PDGFRB-201ENST00000261799 LIPT2A6NK58 231 aa12.05□□□□□ -0.48
PDGFRB-201ENST00000261799 CHEK1O14757 476 aa12.05□□□□□ -0.48
PDGFRB-201ENST00000261799 DNPH1O43598 174 aa12.05□□□□□ -0.48
PDGFRB-201ENST00000261799 PNPP00491 289 aa12.05□□□□□ -0.48
PDGFRB-201ENST00000261799 CDK5R1Q15078 307 aa12.05□□□□□ -0.48
PDGFRB-201ENST00000261799 LAX1Q8IWV1 398 aa12.05□□□□□ -0.48
PDGFRB-201ENST00000261799 OR51S1Q8NGJ8 323 aa12.05□□□□□ -0.48
PDGFRB-201ENST00000261799 C1orf196B1AJZ1 125 aa12.05□□□□□ -0.48
PDGFRB-201ENST00000261799 IGFBP1P08833 259 aaPredicted RBP12.05□□□□□ -0.48
PDGFRB-201ENST00000261799 SPP1P10451 314 aa12.05□□□□□ -0.48
PDGFRB-201ENST00000261799 EPHA2P29317 976 aa12.05□□□□□ -0.48
PDGFRB-201ENST00000261799 SLA2Q9H6Q3 261 aa12.05□□□□□ -0.48
PDGFRB-201ENST00000261799 SIRT3Q9NTG7 399 aaPredicted RBP12.05□□□□□ -0.48
PDGFRB-201ENST00000261799 CCR9P51686 369 aa12.05□□□□□ -0.48
PDGFRB-201ENST00000261799 GFRA1P56159 465 aa12.05□□□□□ -0.48
PDGFRB-201ENST00000261799 VSTM2AQ8TAG5 236 aa12.05□□□□□ -0.48
PDGFRB-201ENST00000261799 WNT2BQ93097 391 aa12.05□□□□□ -0.48
PDGFRB-201ENST00000261799 FCRL1Q96LA6 429 aa12.05□□□□□ -0.48
PDGFRB-201ENST00000261799 PLA2G12AQ9BZM1 189 aa12.05□□□□□ -0.48
PDGFRB-201ENST00000261799 ELOVL5Q9NYP7 299 aa12.05□□□□□ -0.48
PDGFRB-201ENST00000261799 NPTNQ9Y639 398 aa12.05□□□□□ -0.48
PDGFRB-201ENST00000261799 CEPT1Q9Y6K0 416 aa12.05□□□□□ -0.48
PDGFRB-201ENST00000261799 LNP1A1A4G5 178 aa12.05□□□□□ -0.48
PDGFRB-201ENST00000261799 PLPPR2Q96GM1 343 aa12.05□□□□□ -0.48
PDGFRB-201ENST00000261799 SFXN3Q9BWM7 321 aa12.05□□□□□ -0.48
PDGFRB-201ENST00000261799 FBXL2Q9UKC9 423 aa12.05□□□□□ -0.48
PDGFRB-201ENST00000261799 RNF115Q9Y4L5 304 aa12.05□□□□□ -0.48
PDGFRB-201ENST00000261799 PCYT1BQ9Y5K3 369 aaPredicted RBP12.05□□□□□ -0.48
PDGFRB-201ENST00000261799 FADS1O60427 444 aa12.04□□□□□ -0.48
PDGFRB-201ENST00000261799 SPCS2Q15005 226 aa12.04□□□□□ -0.48
PDGFRB-201ENST00000261799 EID2BQ96D98 161 aa12.04□□□□□ -0.48
PDGFRB-201ENST00000261799 ZNF331Q9NQX6 463 aaPredicted RBP12.04□□□□□ -0.48
PDGFRB-201ENST00000261799 ZNF26P17031 533 aaPredicted RBP12.04□□□□□ -0.48
PDGFRB-201ENST00000261799 NME2P22392 152 aa12.04□□□□□ -0.48
PDGFRB-201ENST00000261799 SH2D5Q6ZV89 423 aa12.04□□□□□ -0.48
PDGFRB-201ENST00000261799 MITD1Q8WV92 249 aa12.04□□□□□ -0.48
PDGFRB-201ENST00000261799 ZNF436Q9C0F3 470 aaPredicted RBP12.04□□□□□ -0.48
PDGFRB-201ENST00000261799 CHST2Q9Y4C5 530 aa12.04□□□□□ -0.48
PDGFRB-201ENST00000261799 Q3ZCU0 254 aa12.04□□□□□ -0.48
PDGFRB-201ENST00000261799 C17orf47Q8NEP4 570 aa12.04□□□□□ -0.48
PDGFRB-201ENST00000261799 MRGPRDQ8TDS7 321 aa12.04□□□□□ -0.48
PDGFRB-201ENST00000261799 ABHD3Q8WU67 409 aa12.04□□□□□ -0.48
PDGFRB-201ENST00000261799 RAXQ9Y2V3 346 aa12.04□□□□□ -0.48
PDGFRB-201ENST00000261799 QSER1Q2KHR3 1735 aa12.04□□□□□ -0.48
PDGFRB-201ENST00000261799 WNT1P04628 370 aa12.04□□□□□ -0.48
PDGFRB-201ENST00000261799 SNRNP70P08621 437 aaKnown RBP12.04□□□□□ -0.48
PDGFRB-201ENST00000261799 HTR2BP41595 481 aa12.04□□□□□ -0.48
PDGFRB-201ENST00000261799 AKR1C3P42330 323 aa12.04□□□□□ -0.48
PDGFRB-201ENST00000261799 CDH26Q8IXH8 852 aa12.04□□□□□ -0.48
PDGFRB-201ENST00000261799 SLC25A45Q8N413 288 aa12.04□□□□□ -0.48
PDGFRB-201ENST00000261799 AMER3Q8N944 861 aa12.04□□□□□ -0.48
PDGFRB-201ENST00000261799 CHRDL1Q9BU40 450 aa12.04□□□□□ -0.48
PDGFRB-201ENST00000261799 PCDHGA9Q9Y5G4 932 aaKnown RBP12.04□□□□□ -0.48
PDGFRB-201ENST00000261799 OOEPA6NGQ2 149 aa12.04□□□□□ -0.48
PDGFRB-201ENST00000261799 HAND1O96004 215 aa12.04□□□□□ -0.48
PDGFRB-201ENST00000261799 CSRP1P21291 193 aaKnown RBP12.04□□□□□ -0.48
PDGFRB-201ENST00000261799 ADAM5Q6NVV9 412 aa12.04□□□□□ -0.48
PDGFRB-201ENST00000261799 OR2H1Q9GZK4 316 aa12.04□□□□□ -0.48
PDGFRB-201ENST00000261799 IGHV3-43A0A0B4J1X8 118 aa12.03□□□□□ -0.48
PDGFRB-201ENST00000261799 CYR61O00622 381 aa12.03□□□□□ -0.48
PDGFRB-201ENST00000261799 SULT1A3P0DMM9 295 aa12.03□□□□□ -0.48
PDGFRB-201ENST00000261799 SULT1A4P0DMN0 295 aa12.03□□□□□ -0.48
PDGFRB-201ENST00000261799 IGHV3-43DP0DP04 118 aa12.03□□□□□ -0.48
PDGFRB-201ENST00000261799 FCARP24071 287 aa12.03□□□□□ -0.48
PDGFRB-201ENST00000261799 PIGPP57054 158 aa12.03□□□□□ -0.48
PDGFRB-201ENST00000261799 FAM214BQ7L5A3 538 aa12.03□□□□□ -0.48
PDGFRB-201ENST00000261799 ZFP62Q8NB50 900 aaPredicted RBP12.03□□□□□ -0.48
PDGFRB-201ENST00000261799 HSD17B11Q8NBQ5 300 aa12.03□□□□□ -0.48
PDGFRB-201ENST00000261799 GHITMQ9H3K2 345 aa12.03□□□□□ -0.48
PDGFRB-201ENST00000261799 METTL17Q9H7H0 456 aaPredicted RBP12.03□□□□□ -0.48
PDGFRB-201ENST00000261799 TMEM235A6NFC5 223 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms