RNA–Protein interactions for RNA: ENST00000260130.8

SDCBP-201, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDCBP, Length 2,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-201ENST00000260130 ZNF767PQ75MW2 155 aa14.26□□□□□ -0.13
SDCBP-201ENST00000260130 NR2C2APQ86WQ0 139 aa14.26□□□□□ -0.13
SDCBP-201ENST00000260130 CIARTQ8N365 385 aaPredicted RBP14.26□□□□□ -0.13
SDCBP-201ENST00000260130 C10orf105Q8TEF2 133 aa14.26□□□□□ -0.13
SDCBP-201ENST00000260130 C18orf12Q96KH6 178 aa14.26□□□□□ -0.13
SDCBP-201ENST00000260130 HYLS1Q96M11 299 aa14.26□□□□□ -0.13
SDCBP-201ENST00000260130 TBX5Q99593 518 aa14.26□□□□□ -0.13
SDCBP-201ENST00000260130 MSL2Q9HCI7 577 aa14.26□□□□□ -0.13
SDCBP-201ENST00000260130 ZDHHC8Q9ULC8 765 aa14.26□□□□□ -0.13
SDCBP-201ENST00000260130 COPS3Q9UNS2 423 aa14.26□□□□□ -0.13
SDCBP-201ENST00000260130 SIRT4Q9Y6E7 314 aaPredicted RBP14.26□□□□□ -0.13
SDCBP-201ENST00000260130 F8P00451 2351 aa14.26□□□□□ -0.13
SDCBP-201ENST00000260130 IGHV1-46P01743 117 aa14.26□□□□□ -0.13
SDCBP-201ENST00000260130 ANXA2P07355 339 aaKnown RBP14.26□□□□□ -0.13
SDCBP-201ENST00000260130 FOSL1P15407 271 aa14.26□□□□□ -0.13
SDCBP-201ENST00000260130 ANOS1P23352 680 aa14.26□□□□□ -0.13
SDCBP-201ENST00000260130 POU4F2Q12837 409 aa14.26□□□□□ -0.13
SDCBP-201ENST00000260130 SFXN4Q6P4A7 337 aa14.26□□□□□ -0.13
SDCBP-201ENST00000260130 PGAP1Q75T13 922 aa14.26□□□□□ -0.13
SDCBP-201ENST00000260130 LURAP1LQ8IV03 231 aa14.26□□□□□ -0.13
SDCBP-201ENST00000260130 SLC35F2Q8IXU6 374 aa14.26□□□□□ -0.13
SDCBP-201ENST00000260130 SAMD12Q8N8I0 201 aa14.26□□□□□ -0.13
SDCBP-201ENST00000260130 OR4M1Q8NGD0 313 aa14.26□□□□□ -0.13
SDCBP-201ENST00000260130 REG4Q9BYZ8 158 aa14.26□□□□□ -0.13
SDCBP-201ENST00000260130 DECR2Q9NUI1 292 aa14.26□□□□□ -0.13
SDCBP-201ENST00000260130 C5orf63A6NC05 138 aa14.25□□□□□ -0.13
SDCBP-201ENST00000260130 NOTOA8MTQ0 251 aa14.25□□□□□ -0.13
SDCBP-201ENST00000260130 RNF223E7ERA6 249 aa14.25□□□□□ -0.13
SDCBP-201ENST00000260130 NDUFS8O00217 210 aa14.25□□□□□ -0.13
SDCBP-201ENST00000260130 DHFRP00374 187 aa14.25□□□□□ -0.13
SDCBP-201ENST00000260130 ADH4P08319 380 aa14.25□□□□□ -0.13
SDCBP-201ENST00000260130 SELEP16581 610 aa14.25□□□□□ -0.13
SDCBP-201ENST00000260130 HTR2BP41595 481 aa14.25□□□□□ -0.13
SDCBP-201ENST00000260130 ZNF121P58317 390 aaPredicted RBP14.25□□□□□ -0.13
SDCBP-201ENST00000260130 ROM1Q03395 351 aa14.25□□□□□ -0.13
SDCBP-201ENST00000260130 FAM209AQ5JX71 171 aa14.25□□□□□ -0.13
SDCBP-201ENST00000260130 GLYATL3Q5SZD4 288 aa14.25□□□□□ -0.13
SDCBP-201ENST00000260130 PYHIN1Q6K0P9 492 aa14.25□□□□□ -0.13
SDCBP-201ENST00000260130 PRSS45Q7RTY3 260 aa14.25□□□□□ -0.13
SDCBP-201ENST00000260130 MRPL21Q7Z2W9 205 aaKnown RBP14.25□□□□□ -0.13
SDCBP-201ENST00000260130 DIRC2Q96SL1 478 aa14.25□□□□□ -0.13
SDCBP-201ENST00000260130 ABCG5Q9H222 651 aa14.25□□□□□ -0.13
SDCBP-201ENST00000260130 LRP12Q9Y561 859 aa14.25□□□□□ -0.13
SDCBP-201ENST00000260130 PSMD9O00233 223 aa14.24□□□□□ -0.13
SDCBP-201ENST00000260130 PHYHO14832 338 aa14.24□□□□□ -0.13
SDCBP-201ENST00000260130 EIF4EP06730 217 aaKnown RBP14.24□□□□□ -0.13
SDCBP-201ENST00000260130 THBS2P35442 1172 aa14.24□□□□□ -0.13
SDCBP-201ENST00000260130 ZNF92Q03936 586 aa14.24□□□□□ -0.13
SDCBP-201ENST00000260130 PLA1AQ53H76 456 aa14.24□□□□□ -0.13
SDCBP-201ENST00000260130 Q6ZR03 302 aa14.24□□□□□ -0.13
SDCBP-201ENST00000260130 FAM57BQ71RH2 274 aa14.24□□□□□ -0.13
SDCBP-201ENST00000260130 ZNF679Q8IYX0 411 aa14.24□□□□□ -0.13
SDCBP-201ENST00000260130 OR5AS1Q8N127 324 aa14.24□□□□□ -0.13
SDCBP-201ENST00000260130 OR8G5Q8NG78 346 aa14.24□□□□□ -0.13
SDCBP-201ENST00000260130 OR2AE1Q8NHA4 323 aa14.24□□□□□ -0.13
SDCBP-201ENST00000260130 REPIN1Q9BWE0 567 aaKnown RBP14.24□□□□□ -0.13
SDCBP-201ENST00000260130 CACNG2Q9Y698 323 aa14.24□□□□□ -0.13
SDCBP-201ENST00000260130 IQCF6A8MYZ5 107 aa14.24□□□□□ -0.13
SDCBP-201ENST00000260130 LYNX1G3V0Z9 82 aa14.24□□□□□ -0.13
SDCBP-201ENST00000260130 TPD52L2O43399 206 aaKnown RBP14.24□□□□□ -0.13
SDCBP-201ENST00000260130 XRCC2O43543 280 aa14.24□□□□□ -0.13
SDCBP-201ENST00000260130 ZNF254O75437 659 aa14.24□□□□□ -0.13
SDCBP-201ENST00000260130 LYNX1P0DP58 116 aa14.24□□□□□ -0.13
SDCBP-201ENST00000260130 SLC25A16P16260 332 aa14.24□□□□□ -0.13
SDCBP-201ENST00000260130 COL8A2P25067 703 aa14.24□□□□□ -0.13
SDCBP-201ENST00000260130 ACTC1P68032 377 aa14.24□□□□□ -0.13
SDCBP-201ENST00000260130 ACTA1P68133 377 aa14.24□□□□□ -0.13
SDCBP-201ENST00000260130 CEACAM19Q7Z692 300 aa14.24□□□□□ -0.13
SDCBP-201ENST00000260130 RFLNBQ8N5W9 214 aa14.24□□□□□ -0.13
SDCBP-201ENST00000260130 OR52H1Q8NGJ2 320 aa14.24□□□□□ -0.13
SDCBP-201ENST00000260130 RDH5Q92781 318 aa14.24□□□□□ -0.13
SDCBP-201ENST00000260130 SNAPC3Q92966 411 aa14.24□□□□□ -0.13
SDCBP-201ENST00000260130 OR8B4Q96RC9 309 aa14.24□□□□□ -0.13
SDCBP-201ENST00000260130 BRD7Q9NPI1 651 aa14.24□□□□□ -0.13
SDCBP-201ENST00000260130 DIABLOQ9NR28 239 aa14.24□□□□□ -0.13
SDCBP-201ENST00000260130 PRR32B1ATL7 298 aa14.23□□□□□ -0.13
SDCBP-201ENST00000260130 SMAD7O15105 426 aaKnown RBP14.23□□□□□ -0.13
SDCBP-201ENST00000260130 PAHP00439 452 aa14.23□□□□□ -0.13
SDCBP-201ENST00000260130 OR2T7P0C7T2 308 aa14.23□□□□□ -0.13
SDCBP-201ENST00000260130 PRSS12P56730 875 aa14.23□□□□□ -0.13
SDCBP-201ENST00000260130 MRPS11P82912 194 aaKnown RBP14.23□□□□□ -0.13
SDCBP-201ENST00000260130 MS4A15Q8N5U1 240 aa14.23□□□□□ -0.13
SDCBP-201ENST00000260130 BHLHE23Q8NDY6 225 aa14.23□□□□□ -0.13
SDCBP-201ENST00000260130 OR2T27Q8NH04 317 aa14.23□□□□□ -0.13
SDCBP-201ENST00000260130 TRMT10AQ8TBZ6 339 aaKnown RBP14.23□□□□□ -0.13
SDCBP-201ENST00000260130 PIMREGQ9BSJ6 248 aa14.23□□□□□ -0.13
SDCBP-201ENST00000260130 TTTY10Q9BZA0 68 aa14.23□□□□□ -0.13
SDCBP-201ENST00000260130 MED28Q9H204 178 aa14.23□□□□□ -0.13
SDCBP-201ENST00000260130 IKZF2Q9UKS7 526 aa14.23□□□□□ -0.13
SDCBP-201ENST00000260130 HSPB11Q9Y547 144 aa14.23□□□□□ -0.13
SDCBP-201ENST00000260130 ACANP16112 2415 aa14.23□□□□□ -0.13
SDCBP-201ENST00000260130 DCTDP32321 178 aa14.23□□□□□ -0.13
SDCBP-201ENST00000260130 PSMA6P60900 246 aaKnown RBP14.23□□□□□ -0.13
SDCBP-201ENST00000260130 SLC3A1Q07837 685 aa14.23□□□□□ -0.13
SDCBP-201ENST00000260130 OR2Z1Q8NG97 314 aa14.23□□□□□ -0.13
SDCBP-201ENST00000260130 OR13G1Q8NGZ3 307 aa14.23□□□□□ -0.13
SDCBP-201ENST00000260130 SPSB4Q96A44 273 aa14.23□□□□□ -0.13
SDCBP-201ENST00000260130 SGK3Q96BR1 496 aa14.23□□□□□ -0.13
SDCBP-201ENST00000260130 PGAM5Q96HS1 289 aa14.23□□□□□ -0.13
SDCBP-201ENST00000260130 C4orf36Q96KX1 117 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms