RNA–Protein interactions for RNA: ENST00000257552.6

MSI1-201, Transcript of musashi RNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSI1, Length 2,975 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1-201ENST00000257552 TMED7-TICAM2A0A0A6YYA0 188 aa13.01□□□□□ -0.33
MSI1-201ENST00000257552 MASP2O00187 686 aa13.01□□□□□ -0.33
MSI1-201ENST00000257552 PLPP3O14495 311 aa13.01□□□□□ -0.33
MSI1-201ENST00000257552 DEDDO75618 318 aa13.01□□□□□ -0.33
MSI1-201ENST00000257552 DANCRP0C864 163 aa13.01□□□□□ -0.33
MSI1-201ENST00000257552 ZNF84P51523 738 aa13.01□□□□□ -0.33
MSI1-201ENST00000257552 Q3ZCU0 254 aa13.01□□□□□ -0.33
MSI1-201ENST00000257552 GGNBP1Q5YKI7 109 aa13.01□□□□□ -0.33
MSI1-201ENST00000257552 FAM213BQ8TBF2 198 aa13.01□□□□□ -0.33
MSI1-201ENST00000257552 MALSU1Q96EH3 234 aa13.01□□□□□ -0.33
MSI1-201ENST00000257552 MESP1Q9BRJ9 268 aa13.01□□□□□ -0.33
MSI1-201ENST00000257552 EMC6Q9BV81 110 aa13.01□□□□□ -0.33
MSI1-201ENST00000257552 C14orf166Q9Y224 244 aaKnown RBP13.01□□□□□ -0.33
MSI1-201ENST00000257552 OSGIN2Q9Y236 505 aa13.01□□□□□ -0.33
MSI1-201ENST00000257552 ZDBF2Q9HCK1 2354 aa13□□□□□ -0.33
MSI1-201ENST00000257552 ZNF878C9JN71 531 aa13□□□□□ -0.33
MSI1-201ENST00000257552 GAPDHP04406 335 aaKnown RBP13□□□□□ -0.33
MSI1-201ENST00000257552 GABRA4P48169 554 aa13□□□□□ -0.33
MSI1-201ENST00000257552 FOXK1P85037 733 aa13□□□□□ -0.33
MSI1-201ENST00000257552 ACY1Q03154 408 aa13□□□□□ -0.33
MSI1-201ENST00000257552 ZNF574Q6ZN55 896 aaPredicted RBP13□□□□□ -0.33
MSI1-201ENST00000257552 GPR61Q9BZJ8 451 aa13□□□□□ -0.33
MSI1-201ENST00000257552 FAM206AQ9NX38 181 aa13□□□□□ -0.33
MSI1-201ENST00000257552 GFOD1Q9NXC2 390 aa13□□□□□ -0.33
MSI1-201ENST00000257552 A8MVM7 634 aa13□□□□□ -0.33
MSI1-201ENST00000257552 SCGNO76038 276 aa13□□□□□ -0.33
MSI1-201ENST00000257552 GSTP1P09211 210 aaKnown RBP13□□□□□ -0.33
MSI1-201ENST00000257552 OR1D4P47884 311 aa13□□□□□ -0.33
MSI1-201ENST00000257552 CHRFAM7AQ494W8 412 aa13□□□□□ -0.33
MSI1-201ENST00000257552 PLXDC2Q6UX71 529 aa13□□□□□ -0.33
MSI1-201ENST00000257552 ABHD12BQ7Z5M8 362 aaPredicted RBP13□□□□□ -0.33
MSI1-201ENST00000257552 TMEM156Q8N614 296 aa13□□□□□ -0.33
MSI1-201ENST00000257552 SUMF2Q8NBJ7 301 aa13□□□□□ -0.33
MSI1-201ENST00000257552 OR51T1Q8NGJ9 327 aa13□□□□□ -0.33
MSI1-201ENST00000257552 ZDHHC19Q8WVZ1 309 aaPredicted RBP13□□□□□ -0.33
MSI1-201ENST00000257552 SLAMF6Q96DU3 332 aa13□□□□□ -0.33
MSI1-201ENST00000257552 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13□□□□□ -0.33
MSI1-201ENST00000257552 C1orf123Q9NWV4 160 aa13□□□□□ -0.33
MSI1-201ENST00000257552 ST8SIA5O15466 376 aa12.99□□□□□ -0.33
MSI1-201ENST00000257552 DXOO77932 396 aaKnown RBP12.99□□□□□ -0.33
MSI1-201ENST00000257552 ANOS1P23352 680 aa12.99□□□□□ -0.33
MSI1-201ENST00000257552 SLC35A1P78382 337 aa12.99□□□□□ -0.33
MSI1-201ENST00000257552 GAMTQ14353 236 aa12.99□□□□□ -0.33
MSI1-201ENST00000257552 TMEM182Q6ZP80 229 aaPredicted RBP12.99□□□□□ -0.33
MSI1-201ENST00000257552 LHFPL1Q86WI0 220 aa12.99□□□□□ -0.33
MSI1-201ENST00000257552 UBAC2Q8NBM4 344 aa12.99□□□□□ -0.33
MSI1-201ENST00000257552 ZNF248Q8NDW4 579 aa12.99□□□□□ -0.33
MSI1-201ENST00000257552 CCDC54Q8NEL0 328 aa12.99□□□□□ -0.33
MSI1-201ENST00000257552 REEP6Q96HR9 211 aa12.99□□□□□ -0.33
MSI1-201ENST00000257552 TBL1XR1Q9BZK7 514 aa12.99□□□□□ -0.33
MSI1-201ENST00000257552 PRDM13Q9H4Q3 707 aa12.99□□□□□ -0.33
MSI1-201ENST00000257552 OPA3Q9H6K4 179 aa12.99□□□□□ -0.33
MSI1-201ENST00000257552 CEACAM18A8MTB9 384 aa12.99□□□□□ -0.33
MSI1-201ENST00000257552 ATXN7O15265 892 aaPredicted RBP12.99□□□□□ -0.33
MSI1-201ENST00000257552 IFNA21P01568 189 aa12.99□□□□□ -0.33
MSI1-201ENST00000257552 NDUFB7P17568 137 aa12.99□□□□□ -0.33
MSI1-201ENST00000257552 MMP16P51512 607 aa12.99□□□□□ -0.33
MSI1-201ENST00000257552 SLC26A5P58743 744 aa12.99□□□□□ -0.33
MSI1-201ENST00000257552 RSU1Q15404 277 aa12.99□□□□□ -0.33
MSI1-201ENST00000257552 KCNG3Q8TAE7 436 aa12.99□□□□□ -0.33
MSI1-201ENST00000257552 GTF3AQ92664 365 aaKnown RBP12.99□□□□□ -0.33
MSI1-201ENST00000257552 SGK3Q96BR1 496 aa12.99□□□□□ -0.33
MSI1-201ENST00000257552 SRPK3Q9UPE1 567 aa12.99□□□□□ -0.33
MSI1-201ENST00000257552 C2orf72A6NCS6 295 aa12.99□□□□□ -0.33
MSI1-201ENST00000257552 FIGNL2A6NMB9 653 aa12.99□□□□□ -0.33
MSI1-201ENST00000257552 AHSA1O95433 338 aa12.99□□□□□ -0.33
MSI1-201ENST00000257552 KLK2P20151 261 aa12.99□□□□□ -0.33
MSI1-201ENST00000257552 CHATP28329 748 aa12.99□□□□□ -0.33
MSI1-201ENST00000257552 IL12BP29460 328 aa12.99□□□□□ -0.33
MSI1-201ENST00000257552 CAPZBP47756 277 aa12.99□□□□□ -0.33
MSI1-201ENST00000257552 SURF2Q15527 256 aaPredicted RBP12.99□□□□□ -0.33
MSI1-201ENST00000257552 COL13A1Q5TAT6 717 aaPredicted RBP12.99□□□□□ -0.33
MSI1-201ENST00000257552 EMG1Q92979 244 aaKnown RBP12.99□□□□□ -0.33
MSI1-201ENST00000257552 NUDT22Q9BRQ3 303 aa12.99□□□□□ -0.33
MSI1-201ENST00000257552 IGKV1D-8A0A087WSZ0 117 aa12.98□□□□□ -0.33
MSI1-201ENST00000257552 NPIPA5E9PKD4 350 aa12.98□□□□□ -0.33
MSI1-201ENST00000257552 MT-ATP6P00846 226 aa12.98□□□□□ -0.33
MSI1-201ENST00000257552 CXCL1P09341 107 aa12.98□□□□□ -0.33
MSI1-201ENST00000257552 SLC37A1P57057 533 aa12.98□□□□□ -0.33
MSI1-201ENST00000257552 CCL20P78556 96 aa12.98□□□□□ -0.33
MSI1-201ENST00000257552 POU3F1Q03052 451 aaPredicted RBP12.98□□□□□ -0.33
MSI1-201ENST00000257552 PTPMT1Q8WUK0 201 aaPredicted RBP12.98□□□□□ -0.33
MSI1-201ENST00000257552 RNF133Q8WVZ7 376 aa12.98□□□□□ -0.33
MSI1-201ENST00000257552 C11orf40Q8WZ69 217 aa12.98□□□□□ -0.33
MSI1-201ENST00000257552 DAZLQ92904 295 aaKnown RBP12.98□□□□□ -0.33
MSI1-201ENST00000257552 ZDHHC12Q96GR4 267 aa12.98□□□□□ -0.33
MSI1-201ENST00000257552 C1orf147Q96MC9 270 aaPredicted RBP12.98□□□□□ -0.33
MSI1-201ENST00000257552 ZNF2Q9BSG1 426 aaPredicted RBP12.98□□□□□ -0.33
MSI1-201ENST00000257552 PBDC1Q9BVG4 233 aa12.98□□□□□ -0.33
MSI1-201ENST00000257552 ELL3Q9HB65 397 aaPredicted RBP12.98□□□□□ -0.33
MSI1-201ENST00000257552 PARPBPQ9NWS1 579 aa12.98□□□□□ -0.33
MSI1-201ENST00000257552 ZDHHC8Q9ULC8 765 aa12.98□□□□□ -0.33
MSI1-201ENST00000257552 NPIPA1Q9UND3 350 aa12.98□□□□□ -0.33
MSI1-201ENST00000257552 ASCC3Q8N3C0 2202 aaKnown RBP12.98□□□□□ -0.33
MSI1-201ENST00000257552 LRP4O75096 1905 aa12.98□□□□□ -0.33
MSI1-201ENST00000257552 BORCS7-ASMTA0A0B4J1R7 106 aa12.98□□□□□ -0.33
MSI1-201ENST00000257552 BLVRBP30043 206 aaPredicted RBP12.98□□□□□ -0.33
MSI1-201ENST00000257552 TAGLN2P37802 199 aaKnown RBP12.98□□□□□ -0.33
MSI1-201ENST00000257552 SLC6A8P48029 635 aa12.98□□□□□ -0.33
MSI1-201ENST00000257552 OR1D5P58170 312 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms