RNA–Protein interactions for RNA: ENST00000248948.3

VPREB3-201, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPREB3, Length 610 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-201ENST00000248948 KIR3DL2P43630 455 aa10.62□□□□□ -0.71
VPREB3-201ENST00000248948 CCR9P51686 369 aa10.62□□□□□ -0.71
VPREB3-201ENST00000248948 PAX8Q06710 450 aa10.62□□□□□ -0.71
VPREB3-201ENST00000248948 GALEQ14376 348 aa10.62□□□□□ -0.71
VPREB3-201ENST00000248948 KLHL22Q53GT1 634 aa10.62□□□□□ -0.71
VPREB3-201ENST00000248948 TMEM244Q5VVB8 128 aa10.62□□□□□ -0.71
VPREB3-201ENST00000248948 MOB3CQ70IA8 216 aa10.62□□□□□ -0.71
VPREB3-201ENST00000248948 SLC36A1Q7Z2H8 476 aa10.62□□□□□ -0.71
VPREB3-201ENST00000248948 ZNF573Q86YE8 665 aa10.62□□□□□ -0.71
VPREB3-201ENST00000248948 PP6455Q8WZ26 134 aa10.62□□□□□ -0.71
VPREB3-201ENST00000248948 TMEM158Q8WZ71 300 aa10.62□□□□□ -0.71
VPREB3-201ENST00000248948 AQP3Q92482 292 aa10.62□□□□□ -0.71
VPREB3-201ENST00000248948 UPRTQ96BW1 309 aa10.62□□□□□ -0.71
VPREB3-201ENST00000248948 PELI1Q96FA3 418 aa10.62□□□□□ -0.71
VPREB3-201ENST00000248948 C4orf36Q96KX1 117 aa10.62□□□□□ -0.71
VPREB3-201ENST00000248948 NUDT16L1Q9BRJ7 211 aaKnown RBP10.62□□□□□ -0.71
VPREB3-201ENST00000248948 DCLRE1BQ9H816 532 aa10.62□□□□□ -0.71
VPREB3-201ENST00000248948 ERVK13-1Q9NX77 482 aa10.62□□□□□ -0.71
VPREB3-201ENST00000248948 DNAJB11Q9UBS4 358 aa10.62□□□□□ -0.71
VPREB3-201ENST00000248948 AASSQ9UDR5 926 aa10.62□□□□□ -0.71
VPREB3-201ENST00000248948 POLDIP2Q9Y2S7 368 aa10.62□□□□□ -0.71
VPREB3-201ENST00000248948 HSPE1-MOB4S4R3N1 261 aa10.62□□□□□ -0.71
VPREB3-201ENST00000248948 IGHV3OR15-7A0A075B7D8 119 aa10.61□□□□□ -0.71
VPREB3-201ENST00000248948 KIR2DS1A0A191URI9 304 aa10.61□□□□□ -0.71
VPREB3-201ENST00000248948 C22orf46C9J442 243 aa10.61□□□□□ -0.71
VPREB3-201ENST00000248948 H0YAE9 185 aa10.61□□□□□ -0.71
VPREB3-201ENST00000248948 GPR37O15354 613 aa10.61□□□□□ -0.71
VPREB3-201ENST00000248948 ECDO95905 644 aaPredicted RBP10.61□□□□□ -0.71
VPREB3-201ENST00000248948 LIPFP07098 398 aa10.61□□□□□ -0.71
VPREB3-201ENST00000248948 MPZP25189 248 aa10.61□□□□□ -0.71
VPREB3-201ENST00000248948 OR12D2P58182 307 aa10.61□□□□□ -0.71
VPREB3-201ENST00000248948 ADARB1P78563 741 aaKnown RBP10.61□□□□□ -0.71
VPREB3-201ENST00000248948 CNN3Q15417 329 aaKnown RBP10.61□□□□□ -0.71
VPREB3-201ENST00000248948 ODF4Q2M2E3 257 aa10.61□□□□□ -0.71
VPREB3-201ENST00000248948 SMIM21Q3B7S5 101 aa10.61□□□□□ -0.71
VPREB3-201ENST00000248948 ATPAF1Q5TC12 328 aaPredicted RBP10.61□□□□□ -0.71
VPREB3-201ENST00000248948 HAGHLQ6PII5 290 aaPredicted RBP10.61□□□□□ -0.71
VPREB3-201ENST00000248948 USP43Q70EL4 1123 aa10.61□□□□□ -0.71
VPREB3-201ENST00000248948 POC1AQ8NBT0 407 aa10.61□□□□□ -0.71
VPREB3-201ENST00000248948 OR52I1Q8NGK6 324 aa10.61□□□□□ -0.71
VPREB3-201ENST00000248948 ZNF671Q8TAW3 534 aa10.61□□□□□ -0.71
VPREB3-201ENST00000248948 ZNF418Q8TF45 676 aaPredicted RBP10.61□□□□□ -0.71
VPREB3-201ENST00000248948 CYGBQ8WWM9 190 aa10.61□□□□□ -0.71
VPREB3-201ENST00000248948 DMRTB1Q96MA1 342 aa10.61□□□□□ -0.71
VPREB3-201ENST00000248948 FGF20Q9NP95 211 aaPredicted RBP10.61□□□□□ -0.71
VPREB3-201ENST00000248948 GPR173Q9NS66 373 aa10.61□□□□□ -0.71
VPREB3-201ENST00000248948 RASL12Q9NYN1 266 aa10.61□□□□□ -0.71
VPREB3-201ENST00000248948 FRRS1LQ9P0K9 344 aa10.61□□□□□ -0.71
VPREB3-201ENST00000248948 NLKQ9UBE8 527 aa10.61□□□□□ -0.71
VPREB3-201ENST00000248948 MYRFQ9Y2G1 1151 aa10.61□□□□□ -0.71
VPREB3-201ENST00000248948 RNF212BA8MTL3 300 aa10.6□□□□□ -0.71
VPREB3-201ENST00000248948 ANKRD65E5RJM6 399 aa10.6□□□□□ -0.71
VPREB3-201ENST00000248948 DVL1O14640 695 aa10.6□□□□□ -0.71
VPREB3-201ENST00000248948 AKR7A2O43488 359 aa10.6□□□□□ -0.71
VPREB3-201ENST00000248948 RHBDL1O75783 438 aa10.6□□□□□ -0.71
VPREB3-201ENST00000248948 CCDC159P0C7I6 412 aa10.6□□□□□ -0.71
VPREB3-201ENST00000248948 PGA5P0DJD9 388 aa10.6□□□□□ -0.71
VPREB3-201ENST00000248948 GLRA1P23415 457 aa10.6□□□□□ -0.71
VPREB3-201ENST00000248948 HAAOP46952 286 aa10.6□□□□□ -0.71
VPREB3-201ENST00000248948 NANOS3P60323 173 aaKnown RBP10.6□□□□□ -0.71
VPREB3-201ENST00000248948 BPIFB2Q8N4F0 458 aa10.6□□□□□ -0.71
VPREB3-201ENST00000248948 DHRSXQ8N5I4 330 aa10.6□□□□□ -0.71
VPREB3-201ENST00000248948 FAM216BQ8N7L0 139 aa10.6□□□□□ -0.71
VPREB3-201ENST00000248948 PNLDC1Q8NA58 520 aaKnown RBP10.6□□□□□ -0.71
VPREB3-201ENST00000248948 ZFAND2BQ8WV99 257 aa10.6□□□□□ -0.71
VPREB3-201ENST00000248948 TMIGD2Q96BF3 282 aa10.6□□□□□ -0.71
VPREB3-201ENST00000248948 JMJD8Q96S16 334 aa10.6□□□□□ -0.71
VPREB3-201ENST00000248948 MDFIQ99750 246 aa10.6□□□□□ -0.71
VPREB3-201ENST00000248948 ZNF649Q9BS31 505 aa10.6□□□□□ -0.71
VPREB3-201ENST00000248948 SUCNR1Q9BXA5 334 aa10.6□□□□□ -0.71
VPREB3-201ENST00000248948 PKIBQ9C010 78 aa10.6□□□□□ -0.71
VPREB3-201ENST00000248948 WDR13Q9H1Z4 485 aa10.6□□□□□ -0.71
VPREB3-201ENST00000248948 AMBNQ9NP70 447 aa10.6□□□□□ -0.71
VPREB3-201ENST00000248948 NUP50Q9UKX7 468 aa10.6□□□□□ -0.71
VPREB3-201ENST00000248948 HHLA2Q9UM44 414 aa10.6□□□□□ -0.71
VPREB3-201ENST00000248948 SLC7A11Q9UPY5 501 aa10.6□□□□□ -0.71
VPREB3-201ENST00000248948 TMEM212A6NML5 194 aa10.59□□□□□ -0.71
VPREB3-201ENST00000248948 OR4C45A6NMZ5 311 aa10.59□□□□□ -0.71
VPREB3-201ENST00000248948 OR2AT4A6NND4 320 aa10.59□□□□□ -0.71
VPREB3-201ENST00000248948 J3QLW9 94 aa10.59□□□□□ -0.71
VPREB3-201ENST00000248948 SIGLEC5O15389 551 aa10.59□□□□□ -0.71
VPREB3-201ENST00000248948 NDUFB3O43676 98 aa10.59□□□□□ -0.71
VPREB3-201ENST00000248948 NOS1APO75052 506 aaPredicted RBP10.59□□□□□ -0.71
VPREB3-201ENST00000248948 FCN3O75636 299 aa10.59□□□□□ -0.71
VPREB3-201ENST00000248948 CLIC3O95833 236 aa10.59□□□□□ -0.71
VPREB3-201ENST00000248948 SERPINA3P01011 423 aa10.59□□□□□ -0.71
VPREB3-201ENST00000248948 ACAA1P09110 424 aaPredicted RBP10.59□□□□□ -0.71
VPREB3-201ENST00000248948 ZNF19P17023 458 aa10.59□□□□□ -0.71
VPREB3-201ENST00000248948 DCKP27707 260 aa10.59□□□□□ -0.71
VPREB3-201ENST00000248948 CAPGP40121 348 aa10.59□□□□□ -0.71
VPREB3-201ENST00000248948 TGM4P49221 684 aa10.59□□□□□ -0.71
VPREB3-201ENST00000248948 HILS1P60008 231 aa10.59□□□□□ -0.71
VPREB3-201ENST00000248948 ELF3P78545 371 aaPredicted RBP10.59□□□□□ -0.71
VPREB3-201ENST00000248948 IL13RA1P78552 427 aa10.59□□□□□ -0.71
VPREB3-201ENST00000248948 IL24Q13007 206 aa10.59□□□□□ -0.71
VPREB3-201ENST00000248948 ALKBH1Q13686 389 aaKnown RBP10.59□□□□□ -0.71
VPREB3-201ENST00000248948 SMN1Q16637 294 aaKnown RBP10.59□□□□□ -0.71
VPREB3-201ENST00000248948 TUSC1Q2TAM9 212 aa10.59□□□□□ -0.71
VPREB3-201ENST00000248948 LRRC10Q5BKY1 277 aa10.59□□□□□ -0.71
VPREB3-201ENST00000248948 KLF17Q5JT82 389 aaPredicted RBP10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms