RNA–Protein interactions for RNA: ENST00000242776.8

DDX39A-201, Transcript of DExD-box helicase 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39A, Length 1,471 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-201ENST00000242776 C11orf44Q8N8P7 122 aa11.41□□□□□ -0.58
DDX39A-201ENST00000242776 OR8G5Q8NG78 346 aa11.41□□□□□ -0.58
DDX39A-201ENST00000242776 OR13G1Q8NGZ3 307 aa11.41□□□□□ -0.58
DDX39A-201ENST00000242776 OR1F12Q8NHA8 337 aa11.41□□□□□ -0.58
DDX39A-201ENST00000242776 SPTSSAQ969W0 71 aa11.41□□□□□ -0.58
DDX39A-201ENST00000242776 MAP6Q96JE9 813 aa11.41□□□□□ -0.58
DDX39A-201ENST00000242776 WDFY2Q96P53 400 aa11.41□□□□□ -0.58
DDX39A-201ENST00000242776 OR8B4Q96RC9 309 aa11.41□□□□□ -0.58
DDX39A-201ENST00000242776 ALG8Q9BVK2 526 aa11.41□□□□□ -0.58
DDX39A-201ENST00000242776 TTTY10Q9BZA0 68 aa11.41□□□□□ -0.58
DDX39A-201ENST00000242776 NIPAL2Q9H841 368 aa11.41□□□□□ -0.58
DDX39A-201ENST00000242776 PAK1IP1Q9NWT1 392 aaPredicted RBP11.41□□□□□ -0.58
DDX39A-201ENST00000242776 ERVK13-1Q9NX77 482 aa11.41□□□□□ -0.58
DDX39A-201ENST00000242776 ERGIC3Q9Y282 383 aa11.41□□□□□ -0.58
DDX39A-201ENST00000242776 KLHDC2Q9Y2U9 406 aa11.41□□□□□ -0.58
DDX39A-201ENST00000242776 IGHV1-69DA0A0B4J2H0 117 aa11.4□□□□□ -0.58
DDX39A-201ENST00000242776 ZNF879B4DU55 563 aa11.4□□□□□ -0.58
DDX39A-201ENST00000242776 ZNF254O75437 659 aa11.4□□□□□ -0.58
DDX39A-201ENST00000242776 SULT1C4O75897 302 aa11.4□□□□□ -0.58
DDX39A-201ENST00000242776 IGHV1-69P01742 117 aa11.4□□□□□ -0.58
DDX39A-201ENST00000242776 APOC1P02654 83 aa11.4□□□□□ -0.58
DDX39A-201ENST00000242776 RAC2P15153 192 aa11.4□□□□□ -0.58
DDX39A-201ENST00000242776 ROM1Q03395 351 aa11.4□□□□□ -0.58
DDX39A-201ENST00000242776 ZNF85Q03923 595 aa11.4□□□□□ -0.58
DDX39A-201ENST00000242776 METTL11BQ5VVY1 283 aa11.4□□□□□ -0.58
DDX39A-201ENST00000242776 RNLSQ5VYX0 342 aa11.4□□□□□ -0.58
DDX39A-201ENST00000242776 DCDC5Q6ZRR9 648 aa11.4□□□□□ -0.58
DDX39A-201ENST00000242776 KCTD20Q7Z5Y7 419 aa11.4□□□□□ -0.58
DDX39A-201ENST00000242776 LHFPL3Q86UP9 236 aa11.4□□□□□ -0.58
DDX39A-201ENST00000242776 EGFL6Q8IUX8 553 aa11.4□□□□□ -0.58
DDX39A-201ENST00000242776 C1orf87Q8N0U7 546 aa11.4□□□□□ -0.58
DDX39A-201ENST00000242776 SYS1Q8N2H4 156 aa11.4□□□□□ -0.58
DDX39A-201ENST00000242776 MRAPQ8TCY5 172 aa11.4□□□□□ -0.58
DDX39A-201ENST00000242776 HAVCR2Q8TDQ0 301 aa11.4□□□□□ -0.58
DDX39A-201ENST00000242776 MND1Q9BWT6 205 aa11.4□□□□□ -0.58
DDX39A-201ENST00000242776 CDCA4Q9BXL8 241 aa11.4□□□□□ -0.58
DDX39A-201ENST00000242776 PNRC2Q9NPJ4 139 aaKnown RBP11.4□□□□□ -0.58
DDX39A-201ENST00000242776 ERVK-18Q9QC07 812 aa11.4□□□□□ -0.58
DDX39A-201ENST00000242776 CTSZQ9UBR2 303 aa11.4□□□□□ -0.58
DDX39A-201ENST00000242776 DNAJB11Q9UBS4 358 aa11.4□□□□□ -0.58
DDX39A-201ENST00000242776 CAB39Q9Y376 341 aaPredicted RBP11.4□□□□□ -0.58
DDX39A-201ENST00000242776 ZNF816-ZNF321PA0A0X1KG74 233 aa11.39□□□□□ -0.59
DDX39A-201ENST00000242776 A0A1W2PRD5 423 aa11.39□□□□□ -0.59
DDX39A-201ENST00000242776 A0A1W2PRF3 423 aa11.39□□□□□ -0.59
DDX39A-201ENST00000242776 A0A1W2PRM7 423 aa11.39□□□□□ -0.59
DDX39A-201ENST00000242776 METTL15A6NJ78 407 aa11.39□□□□□ -0.59
DDX39A-201ENST00000242776 MT-ND2P03891 347 aa11.39□□□□□ -0.59
DDX39A-201ENST00000242776 C21orf33P30042 268 aaPredicted RBP11.39□□□□□ -0.59
DDX39A-201ENST00000242776 OPRL1P41146 370 aa11.39□□□□□ -0.59
DDX39A-201ENST00000242776 IER3P46695 156 aa11.39□□□□□ -0.59
DDX39A-201ENST00000242776 BPIFB3P59826 476 aa11.39□□□□□ -0.59
DDX39A-201ENST00000242776 ARF6P62330 175 aa11.39□□□□□ -0.59
DDX39A-201ENST00000242776 MRPL28Q13084 256 aaKnown RBP11.39□□□□□ -0.59
DDX39A-201ENST00000242776 ZNF829Q3KNS6 432 aaPredicted RBP11.39□□□□□ -0.59
DDX39A-201ENST00000242776 CDONQ4KMG0 1287 aa11.39□□□□□ -0.59
DDX39A-201ENST00000242776 DHRS7BQ6IAN0 325 aaPredicted RBP11.39□□□□□ -0.59
DDX39A-201ENST00000242776 ZNF773Q6PK81 442 aa11.39□□□□□ -0.59
DDX39A-201ENST00000242776 SSX6Q7RTT6 188 aa11.39□□□□□ -0.59
DDX39A-201ENST00000242776 YIPF7Q8N8F6 280 aa11.39□□□□□ -0.59
DDX39A-201ENST00000242776 OR52N1Q8NH53 320 aa11.39□□□□□ -0.59
DDX39A-201ENST00000242776 AMELYQ99218 206 aa11.39□□□□□ -0.59
DDX39A-201ENST00000242776 KCNJ15Q99712 375 aa11.39□□□□□ -0.59
DDX39A-201ENST00000242776 GNG8Q9UK08 70 aa11.39□□□□□ -0.59
DDX39A-201ENST00000242776 LRP12Q9Y561 859 aa11.39□□□□□ -0.59
DDX39A-201ENST00000242776 A0A087WXM4 84 aa11.38□□□□□ -0.59
DDX39A-201ENST00000242776 PSMD9O00233 223 aa11.38□□□□□ -0.59
DDX39A-201ENST00000242776 ADAM20O43506 726 aa11.38□□□□□ -0.59
DDX39A-201ENST00000242776 LIMS3P0CW19 117 aa11.38□□□□□ -0.59
DDX39A-201ENST00000242776 LIMS4P0CW20 117 aa11.38□□□□□ -0.59
DDX39A-201ENST00000242776 MMP9P14780 707 aa11.38□□□□□ -0.59
DDX39A-201ENST00000242776 DCTDP32321 178 aa11.38□□□□□ -0.59
DDX39A-201ENST00000242776 ETV1P50549 477 aa11.38□□□□□ -0.59
DDX39A-201ENST00000242776 TPTEP56180 551 aa11.38□□□□□ -0.59
DDX39A-201ENST00000242776 MPPED2Q15777 294 aa11.38□□□□□ -0.59
DDX39A-201ENST00000242776 TBCEQ15813 527 aaPredicted RBP11.38□□□□□ -0.59
DDX39A-201ENST00000242776 ZSCAN4Q8NAM6 433 aaPredicted RBP11.38□□□□□ -0.59
DDX39A-201ENST00000242776 OR11L1Q8NGX0 322 aa11.38□□□□□ -0.59
DDX39A-201ENST00000242776 C4orf36Q96KX1 117 aa11.38□□□□□ -0.59
DDX39A-201ENST00000242776 COG8Q96MW5 612 aa11.38□□□□□ -0.59
DDX39A-201ENST00000242776 SP140LQ9H930 580 aa11.38□□□□□ -0.59
DDX39A-201ENST00000242776 SMURF1Q9HCE7 757 aa11.38□□□□□ -0.59
DDX39A-201ENST00000242776 VCX3AQ9NNX9 186 aa11.38□□□□□ -0.59
DDX39A-201ENST00000242776 TMEM100Q9NV29 134 aa11.38□□□□□ -0.59
DDX39A-201ENST00000242776 MRM2Q9UI43 246 aaKnown RBP11.38□□□□□ -0.59
DDX39A-201ENST00000242776 MAGEA13PA6NCF6 341 aa11.38□□□□□ -0.59
DDX39A-201ENST00000242776 J3QLW9 94 aa11.38□□□□□ -0.59
DDX39A-201ENST00000242776 M0R135 149 aa11.38□□□□□ -0.59
DDX39A-201ENST00000242776 ZNF19P17023 458 aa11.38□□□□□ -0.59
DDX39A-201ENST00000242776 TUBG1P23258 451 aa11.38□□□□□ -0.59
DDX39A-201ENST00000242776 CPT2P23786 658 aa11.38□□□□□ -0.59
DDX39A-201ENST00000242776 RGS6P49758 472 aa11.38□□□□□ -0.59
DDX39A-201ENST00000242776 GBX2P52951 348 aaPredicted RBP11.38□□□□□ -0.59
DDX39A-201ENST00000242776 WNT4P56705 351 aa11.38□□□□□ -0.59
DDX39A-201ENST00000242776 MAB21L1Q13394 359 aa11.38□□□□□ -0.59
DDX39A-201ENST00000242776 OR8B8Q15620 311 aa11.38□□□□□ -0.59
DDX39A-201ENST00000242776 TP53I3Q53FA7 332 aa11.38□□□□□ -0.59
DDX39A-201ENST00000242776 GDPGP1Q6ZNW5 385 aa11.38□□□□□ -0.59
DDX39A-201ENST00000242776 LYG1Q8N1E2 194 aa11.38□□□□□ -0.59
DDX39A-201ENST00000242776 TSPAN14Q8NG11 270 aa11.38□□□□□ -0.59
DDX39A-201ENST00000242776 SGCDQ92629 289 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms