RNA–Protein interactions for RNA: ENST00000233242.5

APOB-201, Transcript of apolipoprotein B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOB, Length 14,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-201ENST00000233242 RAB32Q13637 225 aa7.39□□□□□ -1.23
APOB-201ENST00000233242 DHRS11Q6UWP2 260 aa7.39□□□□□ -1.23
APOB-201ENST00000233242 CPEB3Q8NE35 698 aaKnown RBP7.39□□□□□ -1.23
APOB-201ENST00000233242 ZDHHC19Q8WVZ1 309 aaPredicted RBP7.39□□□□□ -1.23
APOB-201ENST00000233242 RSRP1Q9BUV0 290 aa7.39□□□□□ -1.23
APOB-201ENST00000233242 THAP10Q9P2Z0 257 aaPredicted RBP7.39□□□□□ -1.23
APOB-201ENST00000233242 PRSS50Q9UI38 385 aa7.39□□□□□ -1.23
APOB-201ENST00000233242 TMEM202A6NGA9 273 aa7.38□□□□□ -1.23
APOB-201ENST00000233242 MVDP53602 400 aa7.38□□□□□ -1.23
APOB-201ENST00000233242 EDDM3BP56851 147 aa7.38□□□□□ -1.23
APOB-201ENST00000233242 NCMAPQ5T1S8 102 aa7.38□□□□□ -1.23
APOB-201ENST00000233242 MPTX1A8MV57 137 aa7.38□□□□□ -1.23
APOB-201ENST00000233242 AQP7O14520 342 aa7.38□□□□□ -1.23
APOB-201ENST00000233242 PDE6DO43924 150 aa7.38□□□□□ -1.23
APOB-201ENST00000233242 GLI4P10075 376 aa7.38□□□□□ -1.23
APOB-201ENST00000233242 MDH2P40926 338 aaKnown RBP7.38□□□□□ -1.23
APOB-201ENST00000233242 PMP22Q01453 160 aa7.38□□□□□ -1.23
APOB-201ENST00000233242 OR8B8Q15620 311 aa7.38□□□□□ -1.23
APOB-201ENST00000233242 AQP7P3A6NL99 342 aa7.38□□□□□ -1.23
APOB-201ENST00000233242 PLRG1O43660 514 aaKnown RBP7.38□□□□□ -1.23
APOB-201ENST00000233242 PGA4P0DJD7 388 aa7.38□□□□□ -1.23
APOB-201ENST00000233242 PGA5P0DJD9 388 aa7.38□□□□□ -1.23
APOB-201ENST00000233242 ZNF121P58317 390 aaPredicted RBP7.38□□□□□ -1.23
APOB-201ENST00000233242 OR8G1Q15617 311 aa7.38□□□□□ -1.23
APOB-201ENST00000233242 FAM26DQ5JW98 314 aa7.38□□□□□ -1.23
APOB-201ENST00000233242 C8orf82Q6P1X6 216 aaPredicted RBP7.38□□□□□ -1.23
APOB-201ENST00000233242 TMEFF1Q8IYR6 380 aa7.38□□□□□ -1.23
APOB-201ENST00000233242 GALMQ96C23 342 aa7.38□□□□□ -1.23
APOB-201ENST00000233242 RNF2Q99496 336 aa7.38□□□□□ -1.23
APOB-201ENST00000233242 OCIAD1Q9NX40 245 aa7.38□□□□□ -1.23
APOB-201ENST00000233242 FGF17O60258 216 aa7.38□□□□□ -1.23
APOB-201ENST00000233242 SCRG1O75711 98 aa7.38□□□□□ -1.23
APOB-201ENST00000233242 MRGPRGQ86SM5 289 aa7.38□□□□□ -1.23
APOB-201ENST00000233242 RPS4Y2Q8TD47 263 aa7.38□□□□□ -1.23
APOB-201ENST00000233242 RDH5Q92781 318 aa7.38□□□□□ -1.23
APOB-201ENST00000233242 CXCL3P19876 107 aa7.38□□□□□ -1.23
APOB-201ENST00000233242 KHDC3LQ587J8 217 aa7.38□□□□□ -1.23
APOB-201ENST00000233242 OR2B11Q5JQS5 317 aa7.38□□□□□ -1.23
APOB-201ENST00000233242 PRR27Q6MZM9 219 aa7.38□□□□□ -1.23
APOB-201ENST00000233242 MYPOPQ86VE0 399 aaPredicted RBP7.38□□□□□ -1.23
APOB-201ENST00000233242 POM121L2Q96KW2 1035 aa7.38□□□□□ -1.23
APOB-201ENST00000233242 H3BQ15 152 aa7.38□□□□□ -1.23
APOB-201ENST00000233242 OGG1O15527 345 aa7.38□□□□□ -1.23
APOB-201ENST00000233242 DMWDQ09019 674 aa7.38□□□□□ -1.23
APOB-201ENST00000233242 C11orf40Q8WZ69 217 aa7.38□□□□□ -1.23
APOB-201ENST00000233242 NHLH1Q02575 133 aa7.38□□□□□ -1.23
APOB-201ENST00000233242 ERV3-1Q14264 604 aa7.38□□□□□ -1.23
APOB-201ENST00000233242 LTC4SQ16873 150 aa7.38□□□□□ -1.23
APOB-201ENST00000233242 VWA1Q6PCB0 445 aa7.38□□□□□ -1.23
APOB-201ENST00000233242 C16orf52Q8NHV5 167 aa7.38□□□□□ -1.23
APOB-201ENST00000233242 ABLIM3O94929 683 aa7.38□□□□□ -1.23
APOB-201ENST00000233242 F11P03951 625 aa7.38□□□□□ -1.23
APOB-201ENST00000233242 OR5I1Q13606 314 aa7.38□□□□□ -1.23
APOB-201ENST00000233242 BAHD1Q8TBE0 780 aaPredicted RBP7.38□□□□□ -1.23
APOB-201ENST00000233242 BARX1Q9HBU1 254 aaPredicted RBP7.38□□□□□ -1.23
APOB-201ENST00000233242 LRP12Q9Y561 859 aa7.38□□□□□ -1.23
APOB-201ENST00000233242 SCN3AQ9NY46 2000 aa7.38□□□□□ -1.23
APOB-201ENST00000233242 MYADML2A6NDP7 307 aa7.38□□□□□ -1.23
APOB-201ENST00000233242 ETHE1O95571 254 aa7.38□□□□□ -1.23
APOB-201ENST00000233242 OR4B1Q8NGF8 309 aa7.38□□□□□ -1.23
APOB-201ENST00000233242 KCNE4Q8WWG9 221 aa7.38□□□□□ -1.23
APOB-201ENST00000233242 MRPS24Q96EL2 167 aaKnown RBP7.38□□□□□ -1.23
APOB-201ENST00000233242 VAX2Q9UIW0 290 aa7.38□□□□□ -1.23
APOB-201ENST00000233242 HSPB8Q9UJY1 196 aa7.38□□□□□ -1.23
APOB-201ENST00000233242 ALOX12BO75342 701 aa7.38□□□□□ -1.23
APOB-201ENST00000233242 RRADP55042 308 aa7.38□□□□□ -1.23
APOB-201ENST00000233242 RUNX2Q13950 521 aa7.38□□□□□ -1.23
APOB-201ENST00000233242 FAM53BQ14153 422 aa7.38□□□□□ -1.23
APOB-201ENST00000233242 COL19A1Q14993 1142 aa7.38□□□□□ -1.23
APOB-201ENST00000233242 ZNF79Q15937 498 aa7.38□□□□□ -1.23
APOB-201ENST00000233242 LINC01465Q8N7H1 131 aa7.38□□□□□ -1.23
APOB-201ENST00000233242 C12orf76Q8N812 135 aaPredicted RBP7.38□□□□□ -1.23
APOB-201ENST00000233242 EP300Q09472 2414 aaPredicted RBP7.38□□□□□ -1.23
APOB-201ENST00000233242 A0A1B0GTL3 188 aa7.38□□□□□ -1.23
APOB-201ENST00000233242 CNIH1O95406 144 aa7.38□□□□□ -1.23
APOB-201ENST00000233242 SHISA6Q6ZSJ9 500 aa7.38□□□□□ -1.23
APOB-201ENST00000233242 OR10G3Q8NGC4 313 aa7.38□□□□□ -1.23
APOB-201ENST00000233242 FGF13Q92913 245 aa7.38□□□□□ -1.23
APOB-201ENST00000233242 SPACA5Q96QH8 159 aa7.38□□□□□ -1.23
APOB-201ENST00000233242 IL21Q9HBE4 155 aa7.38□□□□□ -1.23
APOB-201ENST00000233242 ACAA1P09110 424 aaPredicted RBP7.37□□□□□ -1.23
APOB-201ENST00000233242 SLC37A1P57057 533 aa7.37□□□□□ -1.23
APOB-201ENST00000233242 HLA-DRB5Q30154 266 aa7.37□□□□□ -1.23
APOB-201ENST00000233242 LILRA3Q8N6C8 439 aaPredicted RBP7.37□□□□□ -1.23
APOB-201ENST00000233242 IL22RA2Q969J5 263 aa7.37□□□□□ -1.23
APOB-201ENST00000233242 WDR34Q96EX3 536 aa7.37□□□□□ -1.23
APOB-201ENST00000233242 BOD1Q96IK1 185 aa7.37□□□□□ -1.23
APOB-201ENST00000233242 ADAT1Q9BUB4 502 aaKnown RBP7.37□□□□□ -1.23
APOB-201ENST00000233242 MMP25Q9NPA2 562 aa7.37□□□□□ -1.23
APOB-201ENST00000233242 SEMA7AO75326 666 aa7.37□□□□□ -1.23
APOB-201ENST00000233242 DDTP30046 118 aa7.37□□□□□ -1.23
APOB-201ENST00000233242 PTGFRP43088 359 aa7.37□□□□□ -1.23
APOB-201ENST00000233242 DEFB133Q30KQ1 61 aa7.37□□□□□ -1.23
APOB-201ENST00000233242 NMBP08949 121 aa7.37□□□□□ -1.23
APOB-201ENST00000233242 HOXA6P31267 233 aa7.37□□□□□ -1.23
APOB-201ENST00000233242 OR10G8Q8NGN5 311 aa7.37□□□□□ -1.23
APOB-201ENST00000233242 NT5CQ8TCD5 201 aa7.37□□□□□ -1.23
APOB-201ENST00000233242 TRAV34A0A0B4J273 112 aa7.37□□□□□ -1.23
APOB-201ENST00000233242 A0A1B0GTQ1 180 aa7.37□□□□□ -1.23
APOB-201ENST00000233242 ISXQ2M1V0 245 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms