RNA–Protein interactions for RNA: ENST00000233027.9

NEK4-201, Transcript of NIMA related kinase 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK4, Length 6,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-201ENST00000233027 GNRHR2Q96P88 292 aa11.95□□□□□ -0.5
NEK4-201ENST00000233027 VN1R1Q9GZP7 353 aa11.95□□□□□ -0.5
NEK4-201ENST00000233027 PARD6AQ9NPB6 346 aa11.95□□□□□ -0.5
NEK4-201ENST00000233027 TGOLN2O43493 480 aa11.95□□□□□ -0.5
NEK4-201ENST00000233027 CST4P01036 141 aa11.95□□□□□ -0.5
NEK4-201ENST00000233027 GABRG2P18507 467 aa11.95□□□□□ -0.5
NEK4-201ENST00000233027 CEACAM6P40199 344 aa11.95□□□□□ -0.5
NEK4-201ENST00000233027 GNG10P50151 68 aa11.95□□□□□ -0.5
NEK4-201ENST00000233027 OR5M9Q8NGP3 310 aa11.95□□□□□ -0.5
NEK4-201ENST00000233027 C19orf43Q9BQ61 176 aa11.95□□□□□ -0.5
NEK4-201ENST00000233027 TIMM9Q9Y5J7 89 aa11.95□□□□□ -0.5
NEK4-201ENST00000233027 ALG1L2C9J202 215 aa11.95□□□□□ -0.5
NEK4-201ENST00000233027 SPINK2P20155 84 aa11.95□□□□□ -0.5
NEK4-201ENST00000233027 FUT3P21217 361 aa11.95□□□□□ -0.5
NEK4-201ENST00000233027 GALR1P47211 349 aa11.95□□□□□ -0.5
NEK4-201ENST00000233027 KCNJ3P48549 501 aa11.95□□□□□ -0.5
NEK4-201ENST00000233027 SUMO3P55854 103 aaPredicted RBP11.95□□□□□ -0.5
NEK4-201ENST00000233027 FAM24BQ8N5W8 94 aa11.95□□□□□ -0.5
NEK4-201ENST00000233027 TMEM37Q8WXS4 190 aa11.95□□□□□ -0.5
NEK4-201ENST00000233027 TIMD4Q96H15 378 aa11.95□□□□□ -0.5
NEK4-201ENST00000233027 LRFN3Q9BTN0 628 aa11.95□□□□□ -0.5
NEK4-201ENST00000233027 RSRP1Q9BUV0 290 aa11.95□□□□□ -0.5
NEK4-201ENST00000233027 PMS2P1A4D2B8 440 aa11.95□□□□□ -0.5
NEK4-201ENST00000233027 ZNF784Q8NCA9 323 aaPredicted RBP11.95□□□□□ -0.5
NEK4-201ENST00000233027 LINC00052Q96N35 136 aa11.95□□□□□ -0.5
NEK4-201ENST00000233027 SIRT3Q9NTG7 399 aaPredicted RBP11.95□□□□□ -0.5
NEK4-201ENST00000233027 V9GYH0 126 aa11.95□□□□□ -0.5
NEK4-201ENST00000233027 FAM24AA6NFZ4 105 aa11.95□□□□□ -0.5
NEK4-201ENST00000233027 OR2J3O76001 311 aa11.95□□□□□ -0.5
NEK4-201ENST00000233027 TPPP2P59282 170 aa11.95□□□□□ -0.5
NEK4-201ENST00000233027 PP6455Q8WZ26 134 aa11.95□□□□□ -0.5
NEK4-201ENST00000233027 ADAT1Q9BUB4 502 aaKnown RBP11.95□□□□□ -0.5
NEK4-201ENST00000233027 PLA2G3Q9NZ20 509 aa11.95□□□□□ -0.5
NEK4-201ENST00000233027 MYO9BQ13459 2157 aa11.95□□□□□ -0.5
NEK4-201ENST00000233027 A0A1W2PNV4 684 aa11.94□□□□□ -0.5
NEK4-201ENST00000233027 CCL2P13500 99 aa11.94□□□□□ -0.5
NEK4-201ENST00000233027 PTGFRP43088 359 aa11.94□□□□□ -0.5
NEK4-201ENST00000233027 MNX1P50219 401 aaPredicted RBP11.94□□□□□ -0.5
NEK4-201ENST00000233027 FGF8P55075 233 aaPredicted RBP11.94□□□□□ -0.5
NEK4-201ENST00000233027 PPP1CAP62136 330 aa11.94□□□□□ -0.5
NEK4-201ENST00000233027 GNB2P62879 340 aa11.94□□□□□ -0.5
NEK4-201ENST00000233027 RAB35Q15286 201 aa11.94□□□□□ -0.5
NEK4-201ENST00000233027 CPEB3Q8NE35 698 aaKnown RBP11.94□□□□□ -0.5
NEK4-201ENST00000233027 MCHR2Q969V1 340 aa11.94□□□□□ -0.5
NEK4-201ENST00000233027 ST6GAL2Q96JF0 529 aa11.94□□□□□ -0.5
NEK4-201ENST00000233027 MRGPRX3Q96LB0 322 aa11.94□□□□□ -0.5
NEK4-201ENST00000233027 RAB18Q9NP72 206 aa11.94□□□□□ -0.5
NEK4-201ENST00000233027 IGHV5-51A0A0C4DH38 117 aa11.94□□□□□ -0.5
NEK4-201ENST00000233027 ANKRD20A5PA0PJZ0 165 aa11.94□□□□□ -0.5
NEK4-201ENST00000233027 CALCRP30988 508 aa11.94□□□□□ -0.5
NEK4-201ENST00000233027 NOVA1P51513 510 aaKnown RBP11.94□□□□□ -0.5
NEK4-201ENST00000233027 ZNF774Q6NX45 483 aa11.94□□□□□ -0.5
NEK4-201ENST00000233027 OR4D11Q8NGI4 311 aa11.94□□□□□ -0.5
NEK4-201ENST00000233027 OR5C1Q8NGR4 320 aa11.94□□□□□ -0.5
NEK4-201ENST00000233027 TECTBQ96PL2 329 aa11.94□□□□□ -0.5
NEK4-201ENST00000233027 PRO1933Q9H354 126 aa11.94□□□□□ -0.5
NEK4-201ENST00000233027 UBE2ZQ9H832 354 aaPredicted RBP11.94□□□□□ -0.5
NEK4-201ENST00000233027 SLC17A5Q9NRA2 495 aa11.94□□□□□ -0.5
NEK4-201ENST00000233027 ADAMTSL3P82987 1691 aa11.94□□□□□ -0.5
NEK4-201ENST00000233027 MPC2O95563 127 aa11.94□□□□□ -0.5
NEK4-201ENST00000233027 C17orf78Q8N4C9 275 aa11.94□□□□□ -0.5
NEK4-201ENST00000233027 TTC9Q92623 222 aa11.94□□□□□ -0.5
NEK4-201ENST00000233027 C3orf85A0A1B0GTC6 90 aa11.94□□□□□ -0.5
NEK4-201ENST00000233027 OR5H15A6NDH6 313 aa11.94□□□□□ -0.5
NEK4-201ENST00000233027 TMEM127O75204 238 aa11.94□□□□□ -0.5
NEK4-201ENST00000233027 CELA2BP08218 269 aaPredicted RBP11.94□□□□□ -0.5
NEK4-201ENST00000233027 ETFDHQ16134 617 aa11.94□□□□□ -0.5
NEK4-201ENST00000233027 LHX8Q68G74 356 aa11.94□□□□□ -0.5
NEK4-201ENST00000233027 ZNF66Q6ZN08 573 aa11.94□□□□□ -0.5
NEK4-201ENST00000233027 MOGAT1Q96PD6 335 aa11.94□□□□□ -0.5
NEK4-201ENST00000233027 MARVELD1Q9BSK0 173 aa11.94□□□□□ -0.5
NEK4-201ENST00000233027 MASP2O00187 686 aa11.94□□□□□ -0.5
NEK4-201ENST00000233027 OR5AC1P0C628 307 aa11.94□□□□□ -0.5
NEK4-201ENST00000233027 GGNBP1Q5YKI7 109 aa11.94□□□□□ -0.5
NEK4-201ENST00000233027 RGS7BPQ6MZT1 257 aaPredicted RBP11.94□□□□□ -0.5
NEK4-201ENST00000233027 OR10AD1Q8NGE0 317 aa11.94□□□□□ -0.5
NEK4-201ENST00000233027 OR1L3Q8NH93 324 aa11.94□□□□□ -0.5
NEK4-201ENST00000233027 CBY3A6NI87 242 aa11.93□□□□□ -0.5
NEK4-201ENST00000233027 PRRG2O14669 202 aa11.93□□□□□ -0.5
NEK4-201ENST00000233027 PTTG1IPP53801 180 aa11.93□□□□□ -0.5
NEK4-201ENST00000233027 TIAL1Q01085 375 aaKnown RBP eCLIP11.93□□□□□ -0.5
NEK4-201ENST00000233027 PJVKQ0ZLH3 352 aa11.93□□□□□ -0.5
NEK4-201ENST00000233027 FUT7Q11130 342 aa11.93□□□□□ -0.5
NEK4-201ENST00000233027 MRM1Q6IN84 353 aaKnown RBP11.93□□□□□ -0.5
NEK4-201ENST00000233027 SPICQ8N5J4 248 aa11.93□□□□□ -0.5
NEK4-201ENST00000233027 APOBEC3DQ96AK3 386 aaPredicted RBP11.93□□□□□ -0.5
NEK4-201ENST00000233027 ERRFI1Q9UJM3 462 aaPredicted RBP11.93□□□□□ -0.5
NEK4-201ENST00000233027 TBX21Q9UL17 535 aa11.93□□□□□ -0.5
NEK4-201ENST00000233027 PPIL1Q9Y3C6 166 aa11.93□□□□□ -0.5
NEK4-201ENST00000233027 M0R1X1 148 aa11.93□□□□□ -0.5
NEK4-201ENST00000233027 SRFP11831 508 aa11.93□□□□□ -0.5
NEK4-201ENST00000233027 HMGA2P52926 109 aa11.93□□□□□ -0.5
NEK4-201ENST00000233027 SMIM21Q3B7S5 101 aa11.93□□□□□ -0.5
NEK4-201ENST00000233027 SFTPA1Q8IWL2 248 aa11.93□□□□□ -0.5
NEK4-201ENST00000233027 TTC3P53804 2025 aa11.93□□□□□ -0.5
NEK4-201ENST00000233027 PRRC2BQ5JSZ5 2229 aaKnown RBP11.93□□□□□ -0.5
NEK4-201ENST00000233027 ITGBL1O95965 494 aaPredicted RBP11.93□□□□□ -0.5
NEK4-201ENST00000233027 GALP22466 123 aa11.93□□□□□ -0.5
NEK4-201ENST00000233027 CA6P23280 308 aa11.93□□□□□ -0.5
NEK4-201ENST00000233027 OR2A2Q6IF42 318 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms