RNA–Protein interactions for RNA: ENST00000222823.8

NOD1-201, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOD1, Length 4,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-201ENST00000222823 SPTBP11277 2137 aa10.27□□□□□ -0.77
NOD1-201ENST00000222823 PTGFRP43088 359 aa10.27□□□□□ -0.77
NOD1-201ENST00000222823 DHODHQ02127 395 aa10.27□□□□□ -0.77
NOD1-201ENST00000222823 SPEM2Q0P670 501 aa10.27□□□□□ -0.77
NOD1-201ENST00000222823 FAM122CQ6P4D5 195 aa10.27□□□□□ -0.77
NOD1-201ENST00000222823 GLDNQ6ZMI3 551 aaPredicted RBP10.27□□□□□ -0.77
NOD1-201ENST00000222823 TSEN54Q7Z6J9 526 aaKnown RBP10.27□□□□□ -0.77
NOD1-201ENST00000222823 TMEM123Q8N131 208 aa10.27□□□□□ -0.77
NOD1-201ENST00000222823 ZNF439Q8NDP4 499 aa10.27□□□□□ -0.77
NOD1-201ENST00000222823 OR8U1Q8NH10 309 aa10.27□□□□□ -0.77
NOD1-201ENST00000222823 OIT3Q8WWZ8 545 aa10.27□□□□□ -0.77
NOD1-201ENST00000222823 GALMQ96C23 342 aa10.27□□□□□ -0.77
NOD1-201ENST00000222823 CIB3Q96Q77 187 aaPredicted RBP10.27□□□□□ -0.77
NOD1-201ENST00000222823 MTCH2Q9Y6C9 303 aa10.27□□□□□ -0.77
NOD1-201ENST00000222823 VWA8A3KMH1 1905 aa10.26□□□□□ -0.77
NOD1-201ENST00000222823 PPP1R2P9O14990 202 aa10.26□□□□□ -0.77
NOD1-201ENST00000222823 CRYABP02511 175 aaKnown RBP10.26□□□□□ -0.77
NOD1-201ENST00000222823 GP1BAP07359 652 aa10.26□□□□□ -0.77
NOD1-201ENST00000222823 SRD5A2P31213 254 aa10.26□□□□□ -0.77
NOD1-201ENST00000222823 ZNF766Q5HY98 468 aa10.26□□□□□ -0.77
NOD1-201ENST00000222823 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.26□□□□□ -0.77
NOD1-201ENST00000222823 OR10D3Q8NH80 312 aa10.26□□□□□ -0.77
NOD1-201ENST00000222823 ASB13Q8WXK3 278 aa10.26□□□□□ -0.77
NOD1-201ENST00000222823 CORO2AQ92828 525 aa10.26□□□□□ -0.77
NOD1-201ENST00000222823 ARHGAP5-AS1Q96IT6 56 aa10.26□□□□□ -0.77
NOD1-201ENST00000222823 PCOLCE2Q9UKZ9 415 aa10.26□□□□□ -0.77
NOD1-201ENST00000222823 FABP1P07148 127 aa10.26□□□□□ -0.77
NOD1-201ENST00000222823 ADH4P08319 380 aa10.26□□□□□ -0.77
NOD1-201ENST00000222823 RAB13P51153 203 aa10.26□□□□□ -0.77
NOD1-201ENST00000222823 UBE2IP63279 158 aaKnown RBP10.26□□□□□ -0.77
NOD1-201ENST00000222823 RNPS1Q15287 305 aaKnown RBP10.26□□□□□ -0.77
NOD1-201ENST00000222823 RTL8BQ17RB0 113 aa10.26□□□□□ -0.77
NOD1-201ENST00000222823 ZNF774Q6NX45 483 aa10.26□□□□□ -0.77
NOD1-201ENST00000222823 NLRC3Q7RTR2 1065 aa10.26□□□□□ -0.77
NOD1-201ENST00000222823 ST8SIA2Q92186 375 aa10.26□□□□□ -0.77
NOD1-201ENST00000222823 FLRT3Q9NZU0 649 aa10.26□□□□□ -0.77
NOD1-201ENST00000222823 FBXO4Q9UKT5 387 aa10.26□□□□□ -0.77
NOD1-201ENST00000222823 GAB2Q9UQC2 676 aa10.26□□□□□ -0.77
NOD1-201ENST00000222823 H3BP45 60 aa10.26□□□□□ -0.77
NOD1-201ENST00000222823 WNT1P04628 370 aa10.26□□□□□ -0.77
NOD1-201ENST00000222823 SRSF5Q13243 272 aaKnown RBP10.26□□□□□ -0.77
NOD1-201ENST00000222823 PDCD1Q15116 288 aa10.26□□□□□ -0.77
NOD1-201ENST00000222823 PABPC1L2AQ5JQF8 200 aa10.26□□□□□ -0.77
NOD1-201ENST00000222823 FAM74A1Q5RGS3 127 aa10.26□□□□□ -0.77
NOD1-201ENST00000222823 OR2T2Q6IF00 324 aa10.26□□□□□ -0.77
NOD1-201ENST00000222823 SPRED2Q7Z698 418 aa10.26□□□□□ -0.77
NOD1-201ENST00000222823 BAGE3Q86Y29 109 aa10.26□□□□□ -0.77
NOD1-201ENST00000222823 BAGE2Q86Y30 109 aa10.26□□□□□ -0.77
NOD1-201ENST00000222823 SMOC1Q9H4F8 434 aa10.26□□□□□ -0.77
NOD1-201ENST00000222823 TMEM231Q9H6L2 316 aa10.26□□□□□ -0.77
NOD1-201ENST00000222823 ZNF275Q9NSD4 429 aaPredicted RBP10.26□□□□□ -0.77
NOD1-201ENST00000222823 OSGIN2Q9Y236 505 aa10.26□□□□□ -0.77
NOD1-201ENST00000222823 DSPPQ9NZW4 1301 aa10.26□□□□□ -0.77
NOD1-201ENST00000222823 CACNA1GO43497 2377 aa10.26□□□□□ -0.77
NOD1-201ENST00000222823 OR2M5A3KFT3 312 aa10.25□□□□□ -0.77
NOD1-201ENST00000222823 CYR61O00622 381 aa10.25□□□□□ -0.77
NOD1-201ENST00000222823 TNFSF14O43557 240 aa10.25□□□□□ -0.77
NOD1-201ENST00000222823 MPZL1O95297 269 aa10.25□□□□□ -0.77
NOD1-201ENST00000222823 HEXAP06865 529 aa10.25□□□□□ -0.77
NOD1-201ENST00000222823 OR10J4P0C629 311 aa10.25□□□□□ -0.77
NOD1-201ENST00000222823 HIST1H1DP16402 221 aaKnown RBP10.25□□□□□ -0.77
NOD1-201ENST00000222823 TFF2Q03403 129 aa10.25□□□□□ -0.77
NOD1-201ENST00000222823 DBPQ10586 325 aaPredicted RBP10.25□□□□□ -0.77
NOD1-201ENST00000222823 SP6Q3SY56 376 aa10.25□□□□□ -0.77
NOD1-201ENST00000222823 OR2W3Q7Z3T1 314 aa10.25□□□□□ -0.77
NOD1-201ENST00000222823 LSMEM1Q8N8F7 131 aa10.25□□□□□ -0.77
NOD1-201ENST00000222823 CMBLQ96DG6 245 aa10.25□□□□□ -0.77
NOD1-201ENST00000222823 RASL10BQ96S79 203 aa10.25□□□□□ -0.77
NOD1-201ENST00000222823 R4GN57 208 aa10.25□□□□□ -0.77
NOD1-201ENST00000222823 NLRC5Q86WI3 1866 aa10.25□□□□□ -0.77
NOD1-201ENST00000222823 ZNF727A8MUV8 499 aa10.25□□□□□ -0.77
NOD1-201ENST00000222823 UMAD1C9J7I0 102 aa10.25□□□□□ -0.77
NOD1-201ENST00000222823 GPR31O00270 319 aa10.25□□□□□ -0.77
NOD1-201ENST00000222823 AQP7O14520 342 aa10.25□□□□□ -0.77
NOD1-201ENST00000222823 CRYBA2P53672 197 aa10.25□□□□□ -0.77
NOD1-201ENST00000222823 NDUFA6P56556 154 aa10.25□□□□□ -0.77
NOD1-201ENST00000222823 MESP2Q0VG99 397 aa10.25□□□□□ -0.77
NOD1-201ENST00000222823 C9orf152Q5JTZ5 239 aa10.25□□□□□ -0.77
NOD1-201ENST00000222823 OR2Y1Q8NGV0 311 aa10.25□□□□□ -0.77
NOD1-201ENST00000222823 MRPS24Q96EL2 167 aaKnown RBP10.25□□□□□ -0.77
NOD1-201ENST00000222823 MED30Q96HR3 178 aa10.25□□□□□ -0.77
NOD1-201ENST00000222823 ABHD1Q96SE0 405 aa10.25□□□□□ -0.77
NOD1-201ENST00000222823 TPPP3Q9BW30 176 aa10.25□□□□□ -0.77
NOD1-201ENST00000222823 V9GYH0 126 aa10.25□□□□□ -0.77
NOD1-201ENST00000222823 TMEM265A0A087WTH1 108 aa10.25□□□□□ -0.77
NOD1-201ENST00000222823 PPP5D1E7EU14 171 aa10.25□□□□□ -0.77
NOD1-201ENST00000222823 K7EQM0 130 aa10.25□□□□□ -0.77
NOD1-201ENST00000222823 SCGB1D1O95968 90 aa10.25□□□□□ -0.77
NOD1-201ENST00000222823 TMEM11P17152 192 aa10.25□□□□□ -0.77
NOD1-201ENST00000222823 RAG2P55895 527 aa10.25□□□□□ -0.77
NOD1-201ENST00000222823 SCAND1P57086 179 aa10.25□□□□□ -0.77
NOD1-201ENST00000222823 ETFDHQ16134 617 aa10.25□□□□□ -0.77
NOD1-201ENST00000222823 PRSS53Q2L4Q9 553 aa10.25□□□□□ -0.77
NOD1-201ENST00000222823 RPUSD3Q6P087 351 aaKnown RBP10.25□□□□□ -0.77
NOD1-201ENST00000222823 TMPRSS7Q7RTY8 843 aa10.25□□□□□ -0.77
NOD1-201ENST00000222823 ZAR1Q86SH2 424 aa10.25□□□□□ -0.77
NOD1-201ENST00000222823 OR52N4Q8NGI2 321 aa10.25□□□□□ -0.77
NOD1-201ENST00000222823 PTP4A1Q93096 173 aa10.25□□□□□ -0.77
NOD1-201ENST00000222823 NKX6-2Q9C056 277 aaPredicted RBP10.25□□□□□ -0.77
NOD1-201ENST00000222823 ADAM19Q9H013 955 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms