RNA–Protein interactions for RNA: ENST00000222402.7

UBE2D4-201, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2D4, Length 3,974 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-201ENST00000222402 FOXB1Q99853 325 aa13.15□□□□□ -0.3
UBE2D4-201ENST00000222402 BCO1Q9HAY6 547 aa13.15□□□□□ -0.3
UBE2D4-201ENST00000222402 TIMM10BQ9Y5J6 103 aa13.15□□□□□ -0.3
UBE2D4-201ENST00000222402 SMUG1Q53HV7 270 aa13.14□□□□□ -0.31
UBE2D4-201ENST00000222402 H3F3CQ6NXT2 135 aa13.14□□□□□ -0.31
UBE2D4-201ENST00000222402 FBXW12Q6X9E4 464 aa13.14□□□□□ -0.31
UBE2D4-201ENST00000222402 OR5AS1Q8N127 324 aa13.14□□□□□ -0.31
UBE2D4-201ENST00000222402 IL22RA1Q8N6P7 574 aa13.14□□□□□ -0.31
UBE2D4-201ENST00000222402 CCDC71LQ8N9Z2 235 aa13.14□□□□□ -0.31
UBE2D4-201ENST00000222402 INTS12Q96CB8 462 aaKnown RBP13.14□□□□□ -0.31
UBE2D4-201ENST00000222402 RASL12Q9NYN1 266 aa13.14□□□□□ -0.31
UBE2D4-201ENST00000222402 TRAV14DV4A0A0A6YYC5 116 aa13.14□□□□□ -0.31
UBE2D4-201ENST00000222402 CCDC163A0A0D9SF12 145 aa13.14□□□□□ -0.31
UBE2D4-201ENST00000222402 G3V3Q6 166 aa13.14□□□□□ -0.31
UBE2D4-201ENST00000222402 S100A6P06703 90 aa13.14□□□□□ -0.31
UBE2D4-201ENST00000222402 RRADP55042 308 aa13.14□□□□□ -0.31
UBE2D4-201ENST00000222402 CLDN15P56746 228 aa13.14□□□□□ -0.31
UBE2D4-201ENST00000222402 PIGPP57054 158 aa13.14□□□□□ -0.31
UBE2D4-201ENST00000222402 OR1S1Q8NH92 325 aa13.14□□□□□ -0.31
UBE2D4-201ENST00000222402 THOC3Q96J01 351 aaKnown RBP13.14□□□□□ -0.31
UBE2D4-201ENST00000222402 HDHD3Q9BSH5 251 aaPredicted RBP13.14□□□□□ -0.31
UBE2D4-201ENST00000222402 RAB18Q9NP72 206 aa13.14□□□□□ -0.31
UBE2D4-201ENST00000222402 ZNF319Q9P2F9 582 aa13.14□□□□□ -0.31
UBE2D4-201ENST00000222402 ST3GAL6Q9Y274 331 aa13.14□□□□□ -0.31
UBE2D4-201ENST00000222402 FAM166BA8MTA8 275 aa13.14□□□□□ -0.31
UBE2D4-201ENST00000222402 PHF1O43189 567 aaPredicted RBP13.14□□□□□ -0.31
UBE2D4-201ENST00000222402 ZNF735P0CB33 412 aa13.14□□□□□ -0.31
UBE2D4-201ENST00000222402 MPGP29372 298 aa13.14□□□□□ -0.31
UBE2D4-201ENST00000222402 MECP2P51608 486 aaKnown RBP13.14□□□□□ -0.31
UBE2D4-201ENST00000222402 DRAM2Q6UX65 266 aa13.14□□□□□ -0.31
UBE2D4-201ENST00000222402 ADPRHL1Q8NDY3 354 aa13.14□□□□□ -0.31
UBE2D4-201ENST00000222402 OR14K1Q8NGZ2 314 aa13.14□□□□□ -0.31
UBE2D4-201ENST00000222402 IGHEP01854 428 aa13.13□□□□□ -0.31
UBE2D4-201ENST00000222402 GP1BAP07359 652 aa13.13□□□□□ -0.31
UBE2D4-201ENST00000222402 RNF144BQ7Z419 303 aa13.13□□□□□ -0.31
UBE2D4-201ENST00000222402 HOGA1Q86XE5 327 aa13.13□□□□□ -0.31
UBE2D4-201ENST00000222402 SECTM1Q8WVN6 248 aa13.13□□□□□ -0.31
UBE2D4-201ENST00000222402 LRFN1Q9P244 771 aa13.13□□□□□ -0.31
UBE2D4-201ENST00000222402 HS3ST3B1Q9Y662 390 aa13.13□□□□□ -0.31
UBE2D4-201ENST00000222402 FCGR2CP31995 323 aa13.13□□□□□ -0.31
UBE2D4-201ENST00000222402 PCOLCEQ15113 449 aa13.13□□□□□ -0.31
UBE2D4-201ENST00000222402 PLAC9Q5JTB6 97 aa13.13□□□□□ -0.31
UBE2D4-201ENST00000222402 CD300LFQ8TDQ1 290 aa13.13□□□□□ -0.31
UBE2D4-201ENST00000222402 FAM86C1Q9NVL1 165 aa13.13□□□□□ -0.31
UBE2D4-201ENST00000222402 ZNF629Q9UEG4 869 aaPredicted RBP13.13□□□□□ -0.31
UBE2D4-201ENST00000222402 MCTS1Q9ULC4 181 aaKnown RBP13.13□□□□□ -0.31
UBE2D4-201ENST00000222402 SLC25A4P12235 298 aa13.13□□□□□ -0.31
UBE2D4-201ENST00000222402 ZNF16P17020 682 aaPredicted RBP13.13□□□□□ -0.31
UBE2D4-201ENST00000222402 RPL12P30050 165 aaKnown RBP13.13□□□□□ -0.31
UBE2D4-201ENST00000222402 RAB35Q15286 201 aa13.13□□□□□ -0.31
UBE2D4-201ENST00000222402 C1QL2Q7Z5L3 287 aa13.13□□□□□ -0.31
UBE2D4-201ENST00000222402 RTN4RL2Q86UN3 420 aa13.13□□□□□ -0.31
UBE2D4-201ENST00000222402 ZNF695Q8IW36 515 aa13.13□□□□□ -0.31
UBE2D4-201ENST00000222402 HAS2Q92819 552 aa13.13□□□□□ -0.31
UBE2D4-201ENST00000222402 SLC2A8Q9NY64 477 aa13.13□□□□□ -0.31
UBE2D4-201ENST00000222402 CHCHD2Q9Y6H1 151 aaPredicted RBP13.13□□□□□ -0.31
UBE2D4-201ENST00000222402 TRANK1O15050 2925 aa13.13□□□□□ -0.31
UBE2D4-201ENST00000222402 HPNP05981 417 aa13.13□□□□□ -0.31
UBE2D4-201ENST00000222402 OR8U9P0C7N5 309 aa13.13□□□□□ -0.31
UBE2D4-201ENST00000222402 RAC3P60763 192 aa13.13□□□□□ -0.31
UBE2D4-201ENST00000222402 PPIAP62937 165 aaKnown RBP13.13□□□□□ -0.31
UBE2D4-201ENST00000222402 JMJD6Q6NYC1 403 aaPredicted RBP13.13□□□□□ -0.31
UBE2D4-201ENST00000222402 SLC25A26Q70HW3 274 aa13.13□□□□□ -0.31
UBE2D4-201ENST00000222402 SUMF1Q8NBK3 374 aa13.13□□□□□ -0.31
UBE2D4-201ENST00000222402 OR2V1Q8NHB1 315 aa13.13□□□□□ -0.31
UBE2D4-201ENST00000222402 RTN4IP1Q8WWV3 396 aaPredicted RBP13.13□□□□□ -0.31
UBE2D4-201ENST00000222402 SPSB1Q96BD6 273 aa13.13□□□□□ -0.31
UBE2D4-201ENST00000222402 CNOT1A5YKK6 2376 aaKnown RBP13.12□□□□□ -0.31
UBE2D4-201ENST00000222402 CCDC187A0A096LP49 1063 aa13.12□□□□□ -0.31
UBE2D4-201ENST00000222402 LOC390937A0A1W2PQ73 354 aa13.12□□□□□ -0.31
UBE2D4-201ENST00000222402 ZNF345Q14585 488 aa13.12□□□□□ -0.31
UBE2D4-201ENST00000222402 PMS2CLQ68D20 193 aa13.12□□□□□ -0.31
UBE2D4-201ENST00000222402 C6orf15Q6UXA7 325 aaPredicted RBP13.12□□□□□ -0.31
UBE2D4-201ENST00000222402 UBALD2Q8IYN6 164 aa13.12□□□□□ -0.31
UBE2D4-201ENST00000222402 OR10D3Q8NH80 312 aa13.12□□□□□ -0.31
UBE2D4-201ENST00000222402 CPT1CQ8TCG5 803 aa13.12□□□□□ -0.31
UBE2D4-201ENST00000222402 PHYHIPLQ96FC7 376 aa13.12□□□□□ -0.31
UBE2D4-201ENST00000222402 CHST5Q9GZS9 411 aa13.12□□□□□ -0.31
UBE2D4-201ENST00000222402 WDR54Q9H977 334 aa13.12□□□□□ -0.31
UBE2D4-201ENST00000222402 LOXL2Q9Y4K0 774 aa13.12□□□□□ -0.31
UBE2D4-201ENST00000222402 DNAJC13O75165 2243 aa13.12□□□□□ -0.31
UBE2D4-201ENST00000222402 XRCC2O43543 280 aa13.12□□□□□ -0.31
UBE2D4-201ENST00000222402 ECI1P42126 302 aa13.12□□□□□ -0.31
UBE2D4-201ENST00000222402 FAM122CQ6P4D5 195 aa13.12□□□□□ -0.31
UBE2D4-201ENST00000222402 RAB11FIP2Q7L804 512 aa13.12□□□□□ -0.31
UBE2D4-201ENST00000222402 WDFY1Q8IWB7 410 aa13.12□□□□□ -0.31
UBE2D4-201ENST00000222402 HSD17B11Q8NBQ5 300 aa13.12□□□□□ -0.31
UBE2D4-201ENST00000222402 GPR132Q9UNW8 380 aa13.12□□□□□ -0.31
UBE2D4-201ENST00000222402 IGHV1-45A0A0A0MS14 117 aa13.12□□□□□ -0.31
UBE2D4-201ENST00000222402 LDLRAD4O15165 306 aa13.12□□□□□ -0.31
UBE2D4-201ENST00000222402 SSX5O60225 188 aa13.12□□□□□ -0.31
UBE2D4-201ENST00000222402 SNAPINO95295 136 aa13.12□□□□□ -0.31
UBE2D4-201ENST00000222402 CD63P08962 238 aa13.12□□□□□ -0.31
UBE2D4-201ENST00000222402 OMGP23515 440 aa13.12□□□□□ -0.31
UBE2D4-201ENST00000222402 PPT1P50897 306 aa13.12□□□□□ -0.31
UBE2D4-201ENST00000222402 TMEM50BP56557 158 aa13.12□□□□□ -0.31
UBE2D4-201ENST00000222402 PRSS54Q6PEW0 395 aa13.12□□□□□ -0.31
UBE2D4-201ENST00000222402 MKXQ8IYA7 352 aa13.12□□□□□ -0.31
UBE2D4-201ENST00000222402 STPG2Q8N412 459 aa13.12□□□□□ -0.31
UBE2D4-201ENST00000222402 OR13G1Q8NGZ3 307 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms