RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 PMS2CLQ68D20 193 aa15.13■□□□□ 0.01
USB1-201ENST00000219281 C6orf201Q7Z4U5 140 aa15.13■□□□□ 0.01
USB1-201ENST00000219281 LRRC18Q8N456 261 aa15.13■□□□□ 0.01
USB1-201ENST00000219281 ZNF2Q9BSG1 426 aaPredicted RBP15.13■□□□□ 0.01
USB1-201ENST00000219281 ZFP57Q9NU63 452 aa15.13■□□□□ 0.01
USB1-201ENST00000219281 C1orf123Q9NWV4 160 aa15.13■□□□□ 0.01
USB1-201ENST00000219281 PILRBQ9UKJ0 227 aa15.13■□□□□ 0.01
USB1-201ENST00000219281 MCTS1Q9ULC4 181 aaKnown RBP15.13■□□□□ 0.01
USB1-201ENST00000219281 PIGLQ9Y2B2 252 aa15.13■□□□□ 0.01
USB1-201ENST00000219281 ADAMTS9Q9P2N4 1935 aa15.13■□□□□ 0.01
USB1-201ENST00000219281 SERPINE3A8MV23 424 aa15.13■□□□□ 0.01
USB1-201ENST00000219281 RNASEK-C17orf49H0YIS7 233 aa15.13■□□□□ 0.01
USB1-201ENST00000219281 TAAR5O14804 337 aa15.13■□□□□ 0.01
USB1-201ENST00000219281 AGPAT2O15120 278 aa15.13■□□□□ 0.01
USB1-201ENST00000219281 PNLIPP16233 465 aa15.13■□□□□ 0.01
USB1-201ENST00000219281 GABRR1P24046 479 aa15.13■□□□□ 0.01
USB1-201ENST00000219281 HOXA6P31267 233 aa15.13■□□□□ 0.01
USB1-201ENST00000219281 GUCA1AP43080 201 aaPredicted RBP15.13■□□□□ 0.01
USB1-201ENST00000219281 EIF5AP63241 154 aaKnown RBP15.13■□□□□ 0.01
USB1-201ENST00000219281 SPEM2Q0P670 501 aa15.13■□□□□ 0.01
USB1-201ENST00000219281 SURF2Q15527 256 aaPredicted RBP15.13■□□□□ 0.01
USB1-201ENST00000219281 LCN10Q6JVE6 187 aa15.13■□□□□ 0.01
USB1-201ENST00000219281 SEMA6DQ8NFY4 1073 aa15.13■□□□□ 0.01
USB1-201ENST00000219281 SLC22A8Q8TCC7 542 aa15.13■□□□□ 0.01
USB1-201ENST00000219281 RASL10BQ96S79 203 aa15.13■□□□□ 0.01
USB1-201ENST00000219281 HDHD3Q9BSH5 251 aaPredicted RBP15.13■□□□□ 0.01
USB1-201ENST00000219281 CRB3Q9BUF7 120 aa15.13■□□□□ 0.01
USB1-201ENST00000219281 CNTNAP3Q9BZ76 1288 aa15.13■□□□□ 0.01
USB1-201ENST00000219281 HDGFL3Q9Y3E1 203 aa15.13■□□□□ 0.01
USB1-201ENST00000219281 V9GYS6 101 aa15.13■□□□□ 0.01
USB1-201ENST00000219281 CCDC163A0A0D9SF12 145 aa15.12■□□□□ 0.01
USB1-201ENST00000219281 FBXO24O75426 580 aa15.12■□□□□ 0.01
USB1-201ENST00000219281 DHRS3O75911 302 aa15.12■□□□□ 0.01
USB1-201ENST00000219281 MSR1P21757 451 aa15.12■□□□□ 0.01
USB1-201ENST00000219281 CTSSP25774 331 aa15.12■□□□□ 0.01
USB1-201ENST00000219281 HOXA1P49639 335 aaPredicted RBP15.12■□□□□ 0.01
USB1-201ENST00000219281 LSM6P62312 80 aaKnown RBP15.12■□□□□ 0.01
USB1-201ENST00000219281 HLA-BQ31612 363 aa15.12■□□□□ 0.01
USB1-201ENST00000219281 NSUN5P2Q63ZY6 315 aa15.12■□□□□ 0.01
USB1-201ENST00000219281 EIF5AL1Q6IS14 154 aaKnown RBP15.12■□□□□ 0.01
USB1-201ENST00000219281 MAFAQ8NHW3 353 aaPredicted RBP15.12■□□□□ 0.01
USB1-201ENST00000219281 SLC25A43Q8WUT9 341 aaPredicted RBP15.12■□□□□ 0.01
USB1-201ENST00000219281 SPACA9Q96E40 222 aaPredicted RBP15.12■□□□□ 0.01
USB1-201ENST00000219281 DUSP23Q9BVJ7 150 aa15.12■□□□□ 0.01
USB1-201ENST00000219281 TM2D1Q9BX74 207 aa15.12■□□□□ 0.01
USB1-201ENST00000219281 PLA2G2EQ9NZK7 142 aa15.12■□□□□ 0.01
USB1-201ENST00000219281 DHRS7CA6NNS2 312 aa15.12■□□□□ 0.01
USB1-201ENST00000219281 SFTA3P0C7M3 94 aa15.12■□□□□ 0.01
USB1-201ENST00000219281 CPT2P23786 658 aa15.12■□□□□ 0.01
USB1-201ENST00000219281 RPL12P30050 165 aaKnown RBP15.12■□□□□ 0.01
USB1-201ENST00000219281 ID4P47928 161 aa15.12■□□□□ 0.01
USB1-201ENST00000219281 CSNK1A1P48729 337 aa15.12■□□□□ 0.01
USB1-201ENST00000219281 SLC35A1P78382 337 aa15.12■□□□□ 0.01
USB1-201ENST00000219281 PDZK1IP1Q13113 114 aa15.12■□□□□ 0.01
USB1-201ENST00000219281 ENDOGQ14249 297 aaKnown RBP15.12■□□□□ 0.01
USB1-201ENST00000219281 ZNF528Q3MIS6 628 aa15.12■□□□□ 0.01
USB1-201ENST00000219281 GJC3Q8NFK1 279 aa15.12■□□□□ 0.01
USB1-201ENST00000219281 PLEKHJ1Q9NW61 149 aa15.12■□□□□ 0.01
USB1-201ENST00000219281 IGHV3-15A0A0B4J1V0 119 aa15.11■□□□□ 0.01
USB1-201ENST00000219281 IGHV5-10-1A0A0J9YXX1 117 aa15.11■□□□□ 0.01
USB1-201ENST00000219281 K7EPK0 472 aa15.11■□□□□ 0.01
USB1-201ENST00000219281 TDGF1P13385 188 aa15.11■□□□□ 0.01
USB1-201ENST00000219281 ZNF84P51523 738 aa15.11■□□□□ 0.01
USB1-201ENST00000219281 ZNF239Q16600 458 aaKnown RBP15.11■□□□□ 0.01
USB1-201ENST00000219281 RSPO1Q2MKA7 263 aaPredicted RBP15.11■□□□□ 0.01
USB1-201ENST00000219281 SLC16A14Q7RTX9 510 aa15.11■□□□□ 0.01
USB1-201ENST00000219281 SULF2Q8IWU5 870 aa15.11■□□□□ 0.01
USB1-201ENST00000219281 FAM71E2Q8N5Q1 922 aa15.11■□□□□ 0.01
USB1-201ENST00000219281 HAS2Q92819 552 aa15.11■□□□□ 0.01
USB1-201ENST00000219281 SPSB2Q99619 263 aa15.11■□□□□ 0.01
USB1-201ENST00000219281 DEFB126Q9BYW3 111 aa15.11■□□□□ 0.01
USB1-201ENST00000219281 CHST5Q9GZS9 411 aa15.11■□□□□ 0.01
USB1-201ENST00000219281 MED12Q93074 2177 aa15.11■□□□□ 0.01
USB1-201ENST00000219281 ZNF98A6NK75 572 aa15.1■□□□□ 0.01
USB1-201ENST00000219281 CST4P01036 141 aa15.1■□□□□ 0.01
USB1-201ENST00000219281 CRYBA1P05813 215 aa15.1■□□□□ 0.01
USB1-201ENST00000219281 DBHP09172 617 aa15.1■□□□□ 0.01
USB1-201ENST00000219281 SULT1A2P50226 295 aa15.1■□□□□ 0.01
USB1-201ENST00000219281 EIF3IQ13347 325 aaKnown RBP15.1■□□□□ 0.01
USB1-201ENST00000219281 BTNL8Q6UX41 500 aa15.1■□□□□ 0.01
USB1-201ENST00000219281 SGPP2Q8IWX5 399 aa15.1■□□□□ 0.01
USB1-201ENST00000219281 FADS6Q8N9I5 356 aa15.1■□□□□ 0.01
USB1-201ENST00000219281 FNDC9Q8TBE3 224 aa15.1■□□□□ 0.01
USB1-201ENST00000219281 RXFP4Q8TDU9 374 aa15.1■□□□□ 0.01
USB1-201ENST00000219281 PP6455Q8WZ26 134 aa15.1■□□□□ 0.01
USB1-201ENST00000219281 PIGQQ9BRB3 760 aa15.1■□□□□ 0.01
USB1-201ENST00000219281 SMIM3Q9BZL3 60 aa15.1■□□□□ 0.01
USB1-201ENST00000219281 NELFAQ9H3P2 528 aa15.1■□□□□ 0.01
USB1-201ENST00000219281 ESRP2Q9H6T0 727 aaKnown RBP15.1■□□□□ 0.01
USB1-201ENST00000219281 A0A0U1RQV5 110 aa15.1■□□□□ 0.01
USB1-201ENST00000219281 LOC102725191A0A1B0GVB3 256 aa15.1■□□□□ 0.01
USB1-201ENST00000219281 ADH6P28332 368 aa15.1■□□□□ 0.01
USB1-201ENST00000219281 FCGR2CP31995 323 aa15.1■□□□□ 0.01
USB1-201ENST00000219281 CD80P33681 288 aa15.1■□□□□ 0.01
USB1-201ENST00000219281 EIF1P41567 113 aaKnown RBP15.1■□□□□ 0.01
USB1-201ENST00000219281 TMEM268Q5VZI3 342 aa15.1■□□□□ 0.01
USB1-201ENST00000219281 ZNF385AQ96PM9 386 aaKnown RBP15.1■□□□□ 0.01
USB1-201ENST00000219281 CMSS1Q9BQ75 279 aaKnown RBP15.1■□□□□ 0.01
USB1-201ENST00000219281 FBXL17Q9UF56 701 aa15.1■□□□□ 0.01
USB1-201ENST00000219281 RARRES3Q9UL19 164 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms