RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, human

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-231	ENST00000641939	VENTX	O95231	258 aa		12.5	□□□□□ -0.41
PHGDH-231	ENST00000641939	BAG2	O95816	211 aa		12.5	□□□□□ -0.41
PHGDH-231	ENST00000641939	PPIAL4G	P0DN37	164 aa		12.5	□□□□□ -0.41
PHGDH-231	ENST00000641939	FPR2	P25090	351 aa		12.5	□□□□□ -0.41
PHGDH-231	ENST00000641939	CEP78	Q5JTW2	689 aa		12.5	□□□□□ -0.41
PHGDH-231	ENST00000641939	CD276	Q5ZPR3	534 aa		12.5	□□□□□ -0.41
PHGDH-231	ENST00000641939	USP43	Q70EL4	1123 aa		12.5	□□□□□ -0.41
PHGDH-231	ENST00000641939	MOB3C	Q70IA8	216 aa		12.5	□□□□□ -0.41
PHGDH-231	ENST00000641939	CATSPERD	Q86XM0	798 aa		12.5	□□□□□ -0.41
PHGDH-231	ENST00000641939	BPIFB2	Q8N4F0	458 aa		12.5	□□□□□ -0.41
PHGDH-231	ENST00000641939	OR5A2	Q8NGI9	324 aa		12.5	□□□□□ -0.41
PHGDH-231	ENST00000641939	C12orf43	Q96C57	262 aa	Known RBP	12.5	□□□□□ -0.41
PHGDH-231	ENST00000641939	RNFT2	Q96EX2	444 aa		12.5	□□□□□ -0.41
PHGDH-231	ENST00000641939	SLC6A7	Q99884	636 aa		12.5	□□□□□ -0.41
PHGDH-231	ENST00000641939	C19orf24	Q9BVV8	132 aa		12.5	□□□□□ -0.41
PHGDH-231	ENST00000641939	KAAG1	Q9UBP8	84 aa		12.5	□□□□□ -0.41
PHGDH-231	ENST00000641939	NUP50	Q9UKX7	468 aa		12.5	□□□□□ -0.41
PHGDH-231	ENST00000641939	SLC22A13	Q9Y226	551 aa		12.5	□□□□□ -0.41
PHGDH-231	ENST00000641939		V9GYS6	101 aa		12.5	□□□□□ -0.41
PHGDH-231	ENST00000641939	OR5B21	A6NL26	309 aa		12.49	□□□□□ -0.41
PHGDH-231	ENST00000641939	DHRS7C	A6NNS2	312 aa		12.49	□□□□□ -0.41
PHGDH-231	ENST00000641939	C22orf46	C9J442	243 aa		12.49	□□□□□ -0.41
PHGDH-231	ENST00000641939	TMPRSS2	O15393	492 aa		12.49	□□□□□ -0.41
PHGDH-231	ENST00000641939	ENSA	O43768	121 aa	Known RBP	12.49	□□□□□ -0.41
PHGDH-231	ENST00000641939	RGS9	O75916	674 aa	Predicted RBP	12.49	□□□□□ -0.41
PHGDH-231	ENST00000641939	NRAS	P01111	189 aa		12.49	□□□□□ -0.41
PHGDH-231	ENST00000641939	ACTC1	P68032	377 aa		12.49	□□□□□ -0.41
PHGDH-231	ENST00000641939	ACTA1	P68133	377 aa		12.49	□□□□□ -0.41
PHGDH-231	ENST00000641939	ZNF85	Q03923	595 aa		12.49	□□□□□ -0.41
PHGDH-231	ENST00000641939	KLF17	Q5JT82	389 aa	Predicted RBP	12.49	□□□□□ -0.41
PHGDH-231	ENST00000641939	WDR38	Q5JTN6	314 aa		12.49	□□□□□ -0.41
PHGDH-231	ENST00000641939	PLCXD3	Q63HM9	321 aa		12.49	□□□□□ -0.41
PHGDH-231	ENST00000641939	DOK3	Q7L591	496 aa		12.49	□□□□□ -0.41
PHGDH-231	ENST00000641939	FAM220A	Q7Z4H9	259 aa		12.49	□□□□□ -0.41
PHGDH-231	ENST00000641939	RORB	Q92753	470 aa		12.49	□□□□□ -0.41
PHGDH-231	ENST00000641939	SEH1L	Q96EE3	360 aa		12.49	□□□□□ -0.41
PHGDH-231	ENST00000641939	SUCNR1	Q9BXA5	334 aa		12.49	□□□□□ -0.41
PHGDH-231	ENST00000641939	RASSF4	Q9H2L5	321 aa		12.49	□□□□□ -0.41
PHGDH-231	ENST00000641939	OR51I2	Q9H344	312 aa		12.49	□□□□□ -0.41
PHGDH-231	ENST00000641939	SMURF1	Q9HCE7	757 aa		12.49	□□□□□ -0.41
PHGDH-231	ENST00000641939	DNAJB11	Q9UBS4	358 aa		12.49	□□□□□ -0.41
PHGDH-231	ENST00000641939	GNG8	Q9UK08	70 aa		12.49	□□□□□ -0.41
PHGDH-231	ENST00000641939	ANK2	Q01484	3957 aa		12.48	□□□□□ -0.41
PHGDH-231	ENST00000641939	LOC100130705	A0A1B0GUX0	176 aa		12.48	□□□□□ -0.41
PHGDH-231	ENST00000641939		J3QRE1	110 aa		12.48	□□□□□ -0.41
PHGDH-231	ENST00000641939	AKR7A2	O43488	359 aa		12.48	□□□□□ -0.41
PHGDH-231	ENST00000641939	MPZL2	O60487	215 aa		12.48	□□□□□ -0.41
PHGDH-231	ENST00000641939	GABRB1	P18505	474 aa		12.48	□□□□□ -0.41
PHGDH-231	ENST00000641939	CCL1	P22362	96 aa		12.48	□□□□□ -0.41
PHGDH-231	ENST00000641939	HILS1	P60008	231 aa		12.48	□□□□□ -0.41
PHGDH-231	ENST00000641939	GMFB	P60983	142 aa		12.48	□□□□□ -0.41
PHGDH-231	ENST00000641939	ISL1	P61371	349 aa		12.48	□□□□□ -0.41
PHGDH-231	ENST00000641939	ZSCAN26	Q16670	478 aa		12.48	□□□□□ -0.41
PHGDH-231	ENST00000641939	ODF4	Q2M2E3	257 aa		12.48	□□□□□ -0.41
PHGDH-231	ENST00000641939	C11orf91	Q3C1V1	193 aa		12.48	□□□□□ -0.41
PHGDH-231	ENST00000641939	TP53I3	Q53FA7	332 aa		12.48	□□□□□ -0.41
PHGDH-231	ENST00000641939	DMRTC1	Q5HYR2	192 aa		12.48	□□□□□ -0.41
PHGDH-231	ENST00000641939	CLVS2	Q5SYC1	327 aa		12.48	□□□□□ -0.41
PHGDH-231	ENST00000641939	TMEM42	Q69YG0	159 aa		12.48	□□□□□ -0.41
PHGDH-231	ENST00000641939		Q6ZSR3	168 aa		12.48	□□□□□ -0.41
PHGDH-231	ENST00000641939	SLC36A1	Q7Z2H8	476 aa		12.48	□□□□□ -0.41
PHGDH-231	ENST00000641939	OR14K1	Q8NGZ2	314 aa		12.48	□□□□□ -0.41
PHGDH-231	ENST00000641939	C22orf15	Q8WYQ4	148 aa		12.48	□□□□□ -0.41
PHGDH-231	ENST00000641939	UPRT	Q96BW1	309 aa		12.48	□□□□□ -0.41
PHGDH-231	ENST00000641939	JMJD8	Q96S16	334 aa		12.48	□□□□□ -0.41
PHGDH-231	ENST00000641939	CCL13	Q99616	98 aa		12.48	□□□□□ -0.41
PHGDH-231	ENST00000641939	WDR13	Q9H1Z4	485 aa		12.48	□□□□□ -0.41
PHGDH-231	ENST00000641939	FAM118A	Q9NWS6	357 aa		12.48	□□□□□ -0.41
PHGDH-231	ENST00000641939	AASS	Q9UDR5	926 aa		12.48	□□□□□ -0.41
PHGDH-231	ENST00000641939	PCDHGB1	Q9Y5G3	927 aa		12.48	□□□□□ -0.41
PHGDH-231	ENST00000641939		A0A1B0GVI7	797 aa		12.47	□□□□□ -0.41
PHGDH-231	ENST00000641939	DAPL1	A0PJW8	107 aa		12.47	□□□□□ -0.41
PHGDH-231	ENST00000641939	DLGAP1	O14490	977 aa		12.47	□□□□□ -0.41
PHGDH-231	ENST00000641939	DVL1	O14640	695 aa		12.47	□□□□□ -0.41
PHGDH-231	ENST00000641939	FCN3	O75636	299 aa		12.47	□□□□□ -0.41
PHGDH-231	ENST00000641939	RHBDL1	O75783	438 aa		12.47	□□□□□ -0.41
PHGDH-231	ENST00000641939	LIPF	P07098	398 aa		12.47	□□□□□ -0.41
PHGDH-231	ENST00000641939	FGF12	P61328	243 aa		12.47	□□□□□ -0.41
PHGDH-231	ENST00000641939	ELF3	P78545	371 aa	Predicted RBP	12.47	□□□□□ -0.41
PHGDH-231	ENST00000641939	CDON	Q4KMG0	1287 aa		12.47	□□□□□ -0.41
PHGDH-231	ENST00000641939	ATPAF1	Q5TC12	328 aa	Predicted RBP	12.47	□□□□□ -0.41
PHGDH-231	ENST00000641939	STUM	Q69YW2	141 aa		12.47	□□□□□ -0.41
PHGDH-231	ENST00000641939	KCTD20	Q7Z5Y7	419 aa		12.47	□□□□□ -0.41
PHGDH-231	ENST00000641939	ENTHD1	Q8IYW4	607 aa		12.47	□□□□□ -0.41
PHGDH-231	ENST00000641939	PRSS35	Q8N3Z0	413 aa		12.47	□□□□□ -0.41
PHGDH-231	ENST00000641939	RHOXF1	Q8NHV9	184 aa		12.47	□□□□□ -0.41
PHGDH-231	ENST00000641939	ZNF671	Q8TAW3	534 aa		12.47	□□□□□ -0.41
PHGDH-231	ENST00000641939	ZFAND2B	Q8WV99	257 aa		12.47	□□□□□ -0.41
PHGDH-231	ENST00000641939	AQP3	Q92482	292 aa		12.47	□□□□□ -0.41
PHGDH-231	ENST00000641939		Q96MT0	163 aa		12.47	□□□□□ -0.41
PHGDH-231	ENST00000641939	RDH12	Q96NR8	316 aa		12.47	□□□□□ -0.41
PHGDH-231	ENST00000641939	DNTTIP1	Q9H147	329 aa		12.47	□□□□□ -0.41
PHGDH-231	ENST00000641939	GPR173	Q9NS66	373 aa		12.47	□□□□□ -0.41
PHGDH-231	ENST00000641939	ACOXL	Q9NUZ1	547 aa		12.47	□□□□□ -0.41
PHGDH-231	ENST00000641939	EXOG	Q9Y2C4	368 aa	Known RBP	12.47	□□□□□ -0.41
PHGDH-231	ENST00000641939		A0A1B0GW55	424 aa		12.46	□□□□□ -0.41
PHGDH-231	ENST00000641939		A6NIN4	97 aa		12.46	□□□□□ -0.41
PHGDH-231	ENST00000641939	SLC16A6	O15403	523 aa		12.46	□□□□□ -0.41
PHGDH-231	ENST00000641939	SYT7	O43581	403 aa		12.46	□□□□□ -0.41
PHGDH-231	ENST00000641939	ECD	O95905	644 aa	Predicted RBP	12.46	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms