RNA–Protein interactions for RNA: ENST00000641587.1

PHGDH-222, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-222ENST00000641587 GFOD2Q3B7J2 385 aa8.42□□□□□ -1.06
PHGDH-222ENST00000641587 CCDC58Q4VC31 144 aa8.42□□□□□ -1.06
PHGDH-222ENST00000641587 RPL22L1Q6P5R6 122 aaKnown RBP8.42□□□□□ -1.06
PHGDH-222ENST00000641587 RBMS3Q6XE24 437 aaKnown RBP8.42□□□□□ -1.06
PHGDH-222ENST00000641587 RFPL4BQ6ZWI9 263 aa8.42□□□□□ -1.06
PHGDH-222ENST00000641587 FAM57BQ71RH2 274 aa8.42□□□□□ -1.06
PHGDH-222ENST00000641587 RHOUQ7L0Q8 258 aa8.42□□□□□ -1.06
PHGDH-222ENST00000641587 SATL1Q86VE3 508 aa8.42□□□□□ -1.06
PHGDH-222ENST00000641587 COMMD2Q86X83 199 aa8.42□□□□□ -1.06
PHGDH-222ENST00000641587 EGFL6Q8IUX8 553 aa8.42□□□□□ -1.06
PHGDH-222ENST00000641587 ZNF676Q8N7Q3 588 aa8.42□□□□□ -1.06
PHGDH-222ENST00000641587 CPEB3Q8NE35 698 aaKnown RBP8.42□□□□□ -1.06
PHGDH-222ENST00000641587 OR2G2Q8NGZ5 317 aa8.42□□□□□ -1.06
PHGDH-222ENST00000641587 SLC25A40Q8TBP6 338 aa8.42□□□□□ -1.06
PHGDH-222ENST00000641587 PGAM5Q96HS1 289 aa8.42□□□□□ -1.06
PHGDH-222ENST00000641587 DCLRE1CQ96SD1 692 aaKnown RBP8.42□□□□□ -1.06
PHGDH-222ENST00000641587 TMED9Q9BVK6 235 aa8.42□□□□□ -1.06
PHGDH-222ENST00000641587 BCL2L14Q9BZR8 327 aa8.42□□□□□ -1.06
PHGDH-222ENST00000641587 COMMD4Q9H0A8 199 aa8.42□□□□□ -1.06
PHGDH-222ENST00000641587 MOB1AQ9H8S9 216 aa8.42□□□□□ -1.06
PHGDH-222ENST00000641587 ISYNA1Q9NPH2 558 aa8.42□□□□□ -1.06
PHGDH-222ENST00000641587 ATPIF1Q9UII2 106 aa8.42□□□□□ -1.06
PHGDH-222ENST00000641587 PURGQ9UJV8 347 aaKnown RBP8.42□□□□□ -1.06
PHGDH-222ENST00000641587 OR52A1Q9UKL2 312 aa8.42□□□□□ -1.06
PHGDH-222ENST00000641587 NUP50Q9UKX7 468 aa8.42□□□□□ -1.06
PHGDH-222ENST00000641587 IGHV2-70P01814 119 aa8.41□□□□□ -1.06
PHGDH-222ENST00000641587 LCATP04180 440 aa8.41□□□□□ -1.06
PHGDH-222ENST00000641587 RNASE1P07998 156 aaKnown RBP8.41□□□□□ -1.06
PHGDH-222ENST00000641587 ACSM4P0C7M7 580 aa8.41□□□□□ -1.06
PHGDH-222ENST00000641587 CD36P16671 472 aa8.41□□□□□ -1.06
PHGDH-222ENST00000641587 CPEP16870 476 aa8.41□□□□□ -1.06
PHGDH-222ENST00000641587 DCTDP32321 178 aa8.41□□□□□ -1.06
PHGDH-222ENST00000641587 LIPAP38571 399 aa8.41□□□□□ -1.06
PHGDH-222ENST00000641587 KIR3DL2P43630 455 aa8.41□□□□□ -1.06
PHGDH-222ENST00000641587 RGS6P49758 472 aa8.41□□□□□ -1.06
PHGDH-222ENST00000641587 NANOS3P60323 173 aaKnown RBP8.41□□□□□ -1.06
PHGDH-222ENST00000641587 RPS25P62851 125 aaKnown RBP8.41□□□□□ -1.06
PHGDH-222ENST00000641587 ACSM1Q08AH1 577 aa8.41□□□□□ -1.06
PHGDH-222ENST00000641587 ZNF154Q13106 437 aa8.41□□□□□ -1.06
PHGDH-222ENST00000641587 WDR38Q5JTN6 314 aa8.41□□□□□ -1.06
PHGDH-222ENST00000641587 FAM209AQ5JX71 171 aa8.41□□□□□ -1.06
PHGDH-222ENST00000641587 GPR107Q5VW38 600 aa8.41□□□□□ -1.06
PHGDH-222ENST00000641587 DRAM2Q6UX65 266 aa8.41□□□□□ -1.06
PHGDH-222ENST00000641587 CATSPERDQ86XM0 798 aa8.41□□□□□ -1.06
PHGDH-222ENST00000641587 OR1J2Q8NGS2 313 aa8.41□□□□□ -1.06
PHGDH-222ENST00000641587 OR13F1Q8NGS4 319 aa8.41□□□□□ -1.06
PHGDH-222ENST00000641587 OR5AK2Q8NH90 309 aa8.41□□□□□ -1.06
PHGDH-222ENST00000641587 SMIM19Q96E16 107 aa8.41□□□□□ -1.06
PHGDH-222ENST00000641587 MARS2Q96GW9 593 aaKnown RBP8.41□□□□□ -1.06
PHGDH-222ENST00000641587 C4orf45Q96LM5 186 aa8.41□□□□□ -1.06
PHGDH-222ENST00000641587 OR2J1Q9GZK6 312 aa8.41□□□□□ -1.06
PHGDH-222ENST00000641587 PBOV1Q9GZY1 135 aa8.41□□□□□ -1.06
PHGDH-222ENST00000641587 SP140LQ9H930 580 aa8.41□□□□□ -1.06
PHGDH-222ENST00000641587 MSL2Q9HCI7 577 aa8.41□□□□□ -1.06
PHGDH-222ENST00000641587 EXOSC4Q9NPD3 245 aaKnown RBP8.41□□□□□ -1.06
PHGDH-222ENST00000641587 FAM206AQ9NX38 181 aa8.41□□□□□ -1.06
PHGDH-222ENST00000641587 SLC22A13Q9Y226 551 aa8.41□□□□□ -1.06
PHGDH-222ENST00000641587 AUP1Q9Y679 476 aa8.41□□□□□ -1.06
PHGDH-222ENST00000641587 SIRT4Q9Y6E7 314 aaPredicted RBP8.41□□□□□ -1.06
PHGDH-222ENST00000641587 LOC100509620A0A075B734 347 aa8.4□□□□□ -1.06
PHGDH-222ENST00000641587 A0A0G2JK05 382 aa8.4□□□□□ -1.06
PHGDH-222ENST00000641587 LOC100506127A0A0U1RQW1 187 aa8.4□□□□□ -1.06
PHGDH-222ENST00000641587 TMEM212A6NML5 194 aa8.4□□□□□ -1.06
PHGDH-222ENST00000641587 H3BSH0 61 aa8.4□□□□□ -1.06
PHGDH-222ENST00000641587 OGG1O15527 345 aa8.4□□□□□ -1.06
PHGDH-222ENST00000641587 SRSF10O75494 262 aaKnown RBP8.4□□□□□ -1.06
PHGDH-222ENST00000641587 FOXH1O75593 365 aa8.4□□□□□ -1.06
PHGDH-222ENST00000641587 IGHV4-38-2P0DP08 117 aa8.4□□□□□ -1.06
PHGDH-222ENST00000641587 ZNF12P17014 697 aa8.4□□□□□ -1.06
PHGDH-222ENST00000641587 GCH1P30793 250 aa8.4□□□□□ -1.06
PHGDH-222ENST00000641587 OTX1P32242 354 aaPredicted RBP8.4□□□□□ -1.06
PHGDH-222ENST00000641587 MMP16P51512 607 aa8.4□□□□□ -1.06
PHGDH-222ENST00000641587 IL13RA1P78552 427 aa8.4□□□□□ -1.06
PHGDH-222ENST00000641587 TPBGQ13641 420 aa8.4□□□□□ -1.06
PHGDH-222ENST00000641587 SLC9A3R2Q15599 337 aa8.4□□□□□ -1.06
PHGDH-222ENST00000641587 SSX1Q16384 188 aa8.4□□□□□ -1.06
PHGDH-222ENST00000641587 ZNF718Q3SXZ3 478 aa8.4□□□□□ -1.06
PHGDH-222ENST00000641587 DMKNQ6E0U4 476 aaPredicted RBP8.4□□□□□ -1.06
PHGDH-222ENST00000641587 FDX2Q6P4F2 183 aa8.4□□□□□ -1.06
PHGDH-222ENST00000641587 NAA40Q86UY6 237 aa8.4□□□□□ -1.06
PHGDH-222ENST00000641587 CLVS1Q8IUQ0 354 aaPredicted RBP8.4□□□□□ -1.06
PHGDH-222ENST00000641587 PRSS35Q8N3Z0 413 aa8.4□□□□□ -1.06
PHGDH-222ENST00000641587 OR8B12Q8NGG6 310 aa8.4□□□□□ -1.06
PHGDH-222ENST00000641587 KLF14Q8TD94 323 aaPredicted RBP8.4□□□□□ -1.06
PHGDH-222ENST00000641587 TSEN15Q8WW01 171 aaKnown RBP8.4□□□□□ -1.06
PHGDH-222ENST00000641587 GHSRQ92847 366 aa8.4□□□□□ -1.06
PHGDH-222ENST00000641587 TMEM203Q969S6 136 aa8.4□□□□□ -1.06
PHGDH-222ENST00000641587 POM121L2Q96KW2 1035 aa8.4□□□□□ -1.06
PHGDH-222ENST00000641587 PDCD1LG2Q9BQ51 273 aa8.4□□□□□ -1.06
PHGDH-222ENST00000641587 OR10A2Q9H208 303 aa8.4□□□□□ -1.06
PHGDH-222ENST00000641587 NDUFB11Q9NX14 153 aa8.4□□□□□ -1.06
PHGDH-222ENST00000641587 FRRS1LQ9P0K9 344 aa8.4□□□□□ -1.06
PHGDH-222ENST00000641587 EIF3KQ9UBQ5 218 aaKnown RBP8.4□□□□□ -1.06
PHGDH-222ENST00000641587 NUFIP1Q9UHK0 495 aaKnown RBP8.4□□□□□ -1.06
PHGDH-222ENST00000641587 INSIG2Q9Y5U4 225 aa8.4□□□□□ -1.06
PHGDH-222ENST00000641587 NPTNQ9Y639 398 aa8.4□□□□□ -1.06
PHGDH-222ENST00000641587 NOTCH1P46531 2555 aa8.39□□□□□ -1.07
PHGDH-222ENST00000641587 PPIAL4EA0A075B759 164 aa8.39□□□□□ -1.07
PHGDH-222ENST00000641587 PPIAL4CA0A0B4J2A2 164 aa8.39□□□□□ -1.07
PHGDH-222ENST00000641587 A0A1B0GVI7 797 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms