RNA–Protein interactions for RNA: ENST00000641513.1

PHGDH-219, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-219ENST00000641513 CXorf67Q86X51 503 aaPredicted RBP7.69□□□□□ -1.18
PHGDH-219ENST00000641513 LYPD6Q86Y78 171 aa7.69□□□□□ -1.18
PHGDH-219ENST00000641513 IZUMO1Q8IYV9 350 aa7.69□□□□□ -1.18
PHGDH-219ENST00000641513 ZNF610Q8N9Z0 462 aa7.69□□□□□ -1.18
PHGDH-219ENST00000641513 TMEM229BQ8NBD8 167 aa7.69□□□□□ -1.18
PHGDH-219ENST00000641513 CCDC54Q8NEL0 328 aa7.69□□□□□ -1.18
PHGDH-219ENST00000641513 SEMA6DQ8NFY4 1073 aa7.69□□□□□ -1.18
PHGDH-219ENST00000641513 OR14K1Q8NGZ2 314 aa7.69□□□□□ -1.18
PHGDH-219ENST00000641513 MBD3L2Q8NHZ7 208 aaPredicted RBP7.69□□□□□ -1.18
PHGDH-219ENST00000641513 GPX8Q8TED1 209 aa7.69□□□□□ -1.18
PHGDH-219ENST00000641513 NPRL2Q8WTW4 380 aa7.69□□□□□ -1.18
PHGDH-219ENST00000641513 SNAPC3Q92966 411 aa7.69□□□□□ -1.18
PHGDH-219ENST00000641513 SLC25A28Q96A46 364 aa7.69□□□□□ -1.18
PHGDH-219ENST00000641513 FAM3DQ96BQ1 224 aa7.69□□□□□ -1.18
PHGDH-219ENST00000641513 SNRNP40Q96DI7 357 aaKnown RBP7.69□□□□□ -1.18
PHGDH-219ENST00000641513 GPER1Q99527 375 aa7.69□□□□□ -1.18
PHGDH-219ENST00000641513 UQCC2Q9BRT2 126 aa7.69□□□□□ -1.18
PHGDH-219ENST00000641513 OR51B6Q9H340 312 aa7.69□□□□□ -1.18
PHGDH-219ENST00000641513 HEXA-AS1Q9H8Q6 139 aa7.69□□□□□ -1.18
PHGDH-219ENST00000641513 TMEM138Q9NPI0 162 aa7.69□□□□□ -1.18
PHGDH-219ENST00000641513 ASF1BQ9NVP2 202 aa7.69□□□□□ -1.18
PHGDH-219ENST00000641513 ZNF222Q9UK12 451 aa7.69□□□□□ -1.18
PHGDH-219ENST00000641513 U3KQ87 197 aa7.69□□□□□ -1.18
PHGDH-219ENST00000641513 UNC79Q9P2D8 2635 aa7.69□□□□□ -1.18
PHGDH-219ENST00000641513 PTPRQQ9UMZ3 2332 aa7.69□□□□□ -1.18
PHGDH-219ENST00000641513 CHD6Q8TD26 2715 aa7.68□□□□□ -1.18
PHGDH-219ENST00000641513 LOC100509620A0A075B734 347 aa7.68□□□□□ -1.18
PHGDH-219ENST00000641513 UBE2QL1A1L167 161 aa7.68□□□□□ -1.18
PHGDH-219ENST00000641513 HMSDA8MTL9 139 aa7.68□□□□□ -1.18
PHGDH-219ENST00000641513 G3V3Q6 166 aa7.68□□□□□ -1.18
PHGDH-219ENST00000641513 ERVH48-1M5A8F1 160 aa7.68□□□□□ -1.18
PHGDH-219ENST00000641513 ARPC1BO15143 372 aaKnown RBP7.68□□□□□ -1.18
PHGDH-219ENST00000641513 XRCC2O43543 280 aa7.68□□□□□ -1.18
PHGDH-219ENST00000641513 SLC22A5O76082 557 aa7.68□□□□□ -1.18
PHGDH-219ENST00000641513 CNOT4O95628 575 aaKnown RBP7.68□□□□□ -1.18
PHGDH-219ENST00000641513 ALDOBP05062 364 aa7.68□□□□□ -1.18
PHGDH-219ENST00000641513 CRHP06850 196 aa7.68□□□□□ -1.18
PHGDH-219ENST00000641513 HOXD4P09016 255 aaPredicted RBP7.68□□□□□ -1.18
PHGDH-219ENST00000641513 COX5BP10606 129 aa7.68□□□□□ -1.18
PHGDH-219ENST00000641513 CXCL3P19876 107 aa7.68□□□□□ -1.18
PHGDH-219ENST00000641513 TBPP20226 339 aa7.68□□□□□ -1.18
PHGDH-219ENST00000641513 PRSS3P35030 304 aa7.68□□□□□ -1.18
PHGDH-219ENST00000641513 POU3F4P49335 361 aa7.68□□□□□ -1.18
PHGDH-219ENST00000641513 VEGFCP49767 419 aa7.68□□□□□ -1.18
PHGDH-219ENST00000641513 TDGF1P3P51864 188 aa7.68□□□□□ -1.18
PHGDH-219ENST00000641513 TAS2R19P59542 299 aa7.68□□□□□ -1.18
PHGDH-219ENST00000641513 MALLQ13021 153 aa7.68□□□□□ -1.18
PHGDH-219ENST00000641513 GABRA6Q16445 453 aa7.68□□□□□ -1.18
PHGDH-219ENST00000641513 TBC1D28Q2M2D7 210 aa7.68□□□□□ -1.18
PHGDH-219ENST00000641513 EIF2S3LQ2VIR3 472 aaKnown RBP7.68□□□□□ -1.18
PHGDH-219ENST00000641513 C2orf76Q3KRA6 126 aa7.68□□□□□ -1.18
PHGDH-219ENST00000641513 KRTAP27-1Q3LI81 207 aa7.68□□□□□ -1.18
PHGDH-219ENST00000641513 ESCO2Q56NI9 601 aa7.68□□□□□ -1.18
PHGDH-219ENST00000641513 CLLU1Q5K131 121 aa7.68□□□□□ -1.18
PHGDH-219ENST00000641513 ZNF324BQ6AW86 544 aaPredicted RBP7.68□□□□□ -1.18
PHGDH-219ENST00000641513 ZNF529Q6P280 563 aa7.68□□□□□ -1.18
PHGDH-219ENST00000641513 SEM1Q6ZVN7 128 aa7.68□□□□□ -1.18
PHGDH-219ENST00000641513 SLC36A1Q7Z2H8 476 aa7.68□□□□□ -1.18
PHGDH-219ENST00000641513 RPRMLQ8N4K4 120 aa7.68□□□□□ -1.18
PHGDH-219ENST00000641513 OR51D1Q8NGF3 324 aa7.68□□□□□ -1.18
PHGDH-219ENST00000641513 OR52N4Q8NGI2 321 aa7.68□□□□□ -1.18
PHGDH-219ENST00000641513 CCDC107Q8WV48 283 aa7.68□□□□□ -1.18
PHGDH-219ENST00000641513 STARD4Q96DR4 205 aa7.68□□□□□ -1.18
PHGDH-219ENST00000641513 SPACA5Q96QH8 159 aa7.68□□□□□ -1.18
PHGDH-219ENST00000641513 SLC25A21Q9BQT8 299 aaPredicted RBP7.68□□□□□ -1.18
PHGDH-219ENST00000641513 CLEC4MQ9H2X3 399 aaPredicted RBP7.68□□□□□ -1.18
PHGDH-219ENST00000641513 KCNK15Q9H427 330 aa7.68□□□□□ -1.18
PHGDH-219ENST00000641513 PLSCR4Q9NRQ2 329 aa7.68□□□□□ -1.18
PHGDH-219ENST00000641513 GPR173Q9NS66 373 aa7.68□□□□□ -1.18
PHGDH-219ENST00000641513 MED9Q9NWA0 146 aa7.68□□□□□ -1.18
PHGDH-219ENST00000641513 SLC2A8Q9NY64 477 aa7.68□□□□□ -1.18
PHGDH-219ENST00000641513 MYEF2Q9P2K5 600 aaKnown RBP7.68□□□□□ -1.18
PHGDH-219ENST00000641513 KLK11Q9UBX7 282 aa7.68□□□□□ -1.18
PHGDH-219ENST00000641513 ATPIF1Q9UII2 106 aa7.68□□□□□ -1.18
PHGDH-219ENST00000641513 TUBD1Q9UJT1 453 aa7.68□□□□□ -1.18
PHGDH-219ENST00000641513 FAM215AQ9Y5M1 114 aa7.68□□□□□ -1.18
PHGDH-219ENST00000641513 V9GYS6 101 aa7.68□□□□□ -1.18
PHGDH-219ENST00000641513 SETXQ7Z333 2677 aaKnown RBP7.67□□□□□ -1.18
PHGDH-219ENST00000641513 ASPMQ8IZT6 3477 aa7.67□□□□□ -1.18
PHGDH-219ENST00000641513 AKR7A2O43488 359 aa7.67□□□□□ -1.18
PHGDH-219ENST00000641513 NOS1APO75052 506 aaPredicted RBP7.67□□□□□ -1.18
PHGDH-219ENST00000641513 TNFSF13O75888 250 aa7.67□□□□□ -1.18
PHGDH-219ENST00000641513 TOXO94900 526 aa7.67□□□□□ -1.18
PHGDH-219ENST00000641513 AGFG2O95081 481 aa7.67□□□□□ -1.18
PHGDH-219ENST00000641513 BPNT1O95861 308 aa7.67□□□□□ -1.18
PHGDH-219ENST00000641513 IGLV3-1P01715 115 aa7.67□□□□□ -1.18
PHGDH-219ENST00000641513 HPXP02790 462 aa7.67□□□□□ -1.18
PHGDH-219ENST00000641513 CD74P04233 296 aa7.67□□□□□ -1.18
PHGDH-219ENST00000641513 GLI4P10075 376 aa7.67□□□□□ -1.18
PHGDH-219ENST00000641513 EDN3P14138 238 aa7.67□□□□□ -1.18
PHGDH-219ENST00000641513 IL32P24001 234 aa7.67□□□□□ -1.18
PHGDH-219ENST00000641513 TIMP3P35625 211 aa7.67□□□□□ -1.18
PHGDH-219ENST00000641513 ZNF93P35789 620 aaPredicted RBP7.67□□□□□ -1.18
PHGDH-219ENST00000641513 IDH3GP51553 393 aaPredicted RBP7.67□□□□□ -1.18
PHGDH-219ENST00000641513 ZNF92Q03936 586 aa7.67□□□□□ -1.18
PHGDH-219ENST00000641513 SRSF4Q08170 494 aaKnown RBP7.67□□□□□ -1.18
PHGDH-219ENST00000641513 PMPCAQ10713 525 aa7.67□□□□□ -1.18
PHGDH-219ENST00000641513 KLRB1Q12918 225 aa7.67□□□□□ -1.18
PHGDH-219ENST00000641513 MRPL49Q13405 166 aaKnown RBP7.67□□□□□ -1.18
PHGDH-219ENST00000641513 MEF2DQ14814 521 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms