RNA–Protein interactions for RNA: ENST00000640916.1

SCARB2-226, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 689 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-226ENST00000640916 LNX2Q8N448 690 aa6.35□□□□□ -1.39
SCARB2-226ENST00000640916 OR5M8Q8NGP6 311 aa6.35□□□□□ -1.39
SCARB2-226ENST00000640916 OR13C2Q8NGS9 318 aa6.35□□□□□ -1.39
SCARB2-226ENST00000640916 OR10Z1Q8NGY1 313 aa6.35□□□□□ -1.39
SCARB2-226ENST00000640916 BCAS4Q8TDM0 211 aa6.35□□□□□ -1.39
SCARB2-226ENST00000640916 UBLCP1Q8WVY7 318 aaPredicted RBP6.35□□□□□ -1.39
SCARB2-226ENST00000640916 RPL3LQ92901 407 aaKnown RBP6.35□□□□□ -1.39
SCARB2-226ENST00000640916 SPSB4Q96A44 273 aa6.35□□□□□ -1.39
SCARB2-226ENST00000640916 SDSLQ96GA7 329 aa6.35□□□□□ -1.39
SCARB2-226ENST00000640916 ZNF799Q96GE5 643 aa6.35□□□□□ -1.39
SCARB2-226ENST00000640916 PITX2Q99697 317 aa6.35□□□□□ -1.39
SCARB2-226ENST00000640916 KRTAP4-5Q9BYR2 181 aa6.35□□□□□ -1.39
SCARB2-226ENST00000640916 RERGLQ9H628 205 aa6.35□□□□□ -1.39
SCARB2-226ENST00000640916 SP140LQ9H930 580 aa6.35□□□□□ -1.39
SCARB2-226ENST00000640916 NMNAT1Q9HAN9 279 aaPredicted RBP6.35□□□□□ -1.39
SCARB2-226ENST00000640916 USE1Q9NZ43 259 aa6.35□□□□□ -1.39
SCARB2-226ENST00000640916 NLKQ9UBE8 527 aa6.35□□□□□ -1.39
SCARB2-226ENST00000640916 CYB5R1Q9UHQ9 305 aa6.35□□□□□ -1.39
SCARB2-226ENST00000640916 LGALS13Q9UHV8 139 aa6.35□□□□□ -1.39
SCARB2-226ENST00000640916 VPS13DQ5THJ4 4388 aa6.34□□□□□ -1.39
SCARB2-226ENST00000640916 TRIM64CA6NLI5 447 aa6.34□□□□□ -1.39
SCARB2-226ENST00000640916 PRSS47A8MTI9 375 aa6.34□□□□□ -1.39
SCARB2-226ENST00000640916 NUDT19A8MXV4 375 aa6.34□□□□□ -1.39
SCARB2-226ENST00000640916 BIRC5O15392 142 aa6.34□□□□□ -1.39
SCARB2-226ENST00000640916 TIPRLO75663 272 aa6.34□□□□□ -1.39
SCARB2-226ENST00000640916 LY86O95711 162 aa6.34□□□□□ -1.39
SCARB2-226ENST00000640916 PGA5P0DJD9 388 aa6.34□□□□□ -1.39
SCARB2-226ENST00000640916 IGHV1-8P0DP01 117 aa6.34□□□□□ -1.39
SCARB2-226ENST00000640916 PPIBP23284 216 aaKnown RBP6.34□□□□□ -1.39
SCARB2-226ENST00000640916 GABRA2P47869 451 aa6.34□□□□□ -1.39
SCARB2-226ENST00000640916 OR3A4PP47883 348 aa6.34□□□□□ -1.39
SCARB2-226ENST00000640916 SLC9A3P48764 834 aa6.34□□□□□ -1.39
SCARB2-226ENST00000640916 RPL31P62899 125 aaKnown RBP6.34□□□□□ -1.39
SCARB2-226ENST00000640916 PRKCDQ05655 676 aa6.34□□□□□ -1.39
SCARB2-226ENST00000640916 KRR1Q13601 381 aaKnown RBP6.34□□□□□ -1.39
SCARB2-226ENST00000640916 SEC23BQ15437 767 aa6.34□□□□□ -1.39
SCARB2-226ENST00000640916 ZNF260Q3ZCT1 412 aa6.34□□□□□ -1.39
SCARB2-226ENST00000640916 FAM76BQ5HYJ3 339 aa6.34□□□□□ -1.39
SCARB2-226ENST00000640916 PIGWQ7Z7B1 504 aa6.34□□□□□ -1.39
SCARB2-226ENST00000640916 OAFQ86UD1 273 aa6.34□□□□□ -1.39
SCARB2-226ENST00000640916 IFT20Q8IY31 132 aa6.34□□□□□ -1.39
SCARB2-226ENST00000640916 C11orf65Q8NCR3 313 aa6.34□□□□□ -1.39
SCARB2-226ENST00000640916 TMEM185AQ8NFB2 350 aa6.34□□□□□ -1.39
SCARB2-226ENST00000640916 OR4M1Q8NGD0 313 aa6.34□□□□□ -1.39
SCARB2-226ENST00000640916 OR8S1Q8NH09 359 aa6.34□□□□□ -1.39
SCARB2-226ENST00000640916 NOL4LQ96MY1 436 aaPredicted RBP6.34□□□□□ -1.39
SCARB2-226ENST00000640916 ZNF570Q96NI8 536 aa6.34□□□□□ -1.39
SCARB2-226ENST00000640916 RBM14Q96PK6 669 aaKnown RBP6.34□□□□□ -1.39
SCARB2-226ENST00000640916 OR52B2Q96RD2 323 aa6.34□□□□□ -1.39
SCARB2-226ENST00000640916 SLC25A33Q9BSK2 321 aa6.34□□□□□ -1.39
SCARB2-226ENST00000640916 HHLA2Q9UM44 414 aa6.34□□□□□ -1.39
SCARB2-226ENST00000640916 POLR1DQ9Y2S0 133 aa6.34□□□□□ -1.39
SCARB2-226ENST00000640916 SH3GLB1Q9Y371 365 aa6.34□□□□□ -1.39
SCARB2-226ENST00000640916 HTR3EA5X5Y0 456 aa6.33□□□□□ -1.4
SCARB2-226ENST00000640916 XKRYO14609 159 aa6.33□□□□□ -1.4
SCARB2-226ENST00000640916 LDLRAD4O15165 306 aa6.33□□□□□ -1.4
SCARB2-226ENST00000640916 OR2F2O95006 317 aa6.33□□□□□ -1.4
SCARB2-226ENST00000640916 PSKH1P11801 424 aa6.33□□□□□ -1.4
SCARB2-226ENST00000640916 MRPL19P49406 292 aaKnown RBP6.33□□□□□ -1.4
SCARB2-226ENST00000640916 GZMMP51124 257 aa6.33□□□□□ -1.4
SCARB2-226ENST00000640916 TPTEP56180 551 aa6.33□□□□□ -1.4
SCARB2-226ENST00000640916 FXYD6P3P58550 94 aa6.33□□□□□ -1.4
SCARB2-226ENST00000640916 FAM3AP98173 230 aa6.33□□□□□ -1.4
SCARB2-226ENST00000640916 SLC34A1Q06495 639 aa6.33□□□□□ -1.4
SCARB2-226ENST00000640916 KIR2DS1Q14954 304 aa6.33□□□□□ -1.4
SCARB2-226ENST00000640916 ANKDD1AQ495B1 522 aa6.33□□□□□ -1.4
SCARB2-226ENST00000640916 CALHM1Q8IU99 346 aa6.33□□□□□ -1.4
SCARB2-226ENST00000640916 NRMQ8IXM6 262 aa6.33□□□□□ -1.4
SCARB2-226ENST00000640916 OR6V1Q8N148 313 aa6.33□□□□□ -1.4
SCARB2-226ENST00000640916 CD177Q8N6Q3 437 aa6.33□□□□□ -1.4
SCARB2-226ENST00000640916 CYB561A3Q8NBI2 242 aa6.33□□□□□ -1.4
SCARB2-226ENST00000640916 POLR2J2Q9GZM3 115 aaKnown RBP6.33□□□□□ -1.4
SCARB2-226ENST00000640916 POLR2J3Q9H1A7 115 aaKnown RBP6.33□□□□□ -1.4
SCARB2-226ENST00000640916 DCLRE1BQ9H816 532 aa6.33□□□□□ -1.4
SCARB2-226ENST00000640916 YY1AP1Q9H869 796 aa6.33□□□□□ -1.4
SCARB2-226ENST00000640916 NRIP3Q9NQ35 241 aa6.33□□□□□ -1.4
SCARB2-226ENST00000640916 C19orf73Q9NVV2 129 aa6.33□□□□□ -1.4
SCARB2-226ENST00000640916 A4GNTQ9UNA3 340 aa6.33□□□□□ -1.4
SCARB2-226ENST00000640916 B9D1Q9UPM9 204 aa6.33□□□□□ -1.4
SCARB2-226ENST00000640916 PKHD1P08F94 4074 aa6.32□□□□□ -1.4
SCARB2-226ENST00000640916 TRPC5OSA6NMA1 111 aa6.32□□□□□ -1.4
SCARB2-226ENST00000640916 ANKRD30BLA7E2S9 258 aa6.32□□□□□ -1.4
SCARB2-226ENST00000640916 EFCAB9A8MZ26 197 aa6.32□□□□□ -1.4
SCARB2-226ENST00000640916 SOCS2O14508 198 aa6.32□□□□□ -1.4
SCARB2-226ENST00000640916 UBDO15205 165 aa6.32□□□□□ -1.4
SCARB2-226ENST00000640916 PTP4A3O75365 173 aa6.32□□□□□ -1.4
SCARB2-226ENST00000640916 SLC2A1P11166 492 aa6.32□□□□□ -1.4
SCARB2-226ENST00000640916 DDOSTP39656 456 aa6.32□□□□□ -1.4
SCARB2-226ENST00000640916 OR1E2P47887 323 aa6.32□□□□□ -1.4
SCARB2-226ENST00000640916 OR12D2P58182 307 aa6.32□□□□□ -1.4
SCARB2-226ENST00000640916 STX3Q13277 289 aa6.32□□□□□ -1.4
SCARB2-226ENST00000640916 FHL3Q13643 280 aa6.32□□□□□ -1.4
SCARB2-226ENST00000640916 ZBED5Q49AG3 693 aa6.32□□□□□ -1.4
SCARB2-226ENST00000640916 MINOS1Q5TGZ0 78 aa6.32□□□□□ -1.4
SCARB2-226ENST00000640916 PGM2L1Q6PCE3 622 aa6.32□□□□□ -1.4
SCARB2-226ENST00000640916 TBPL2Q6SJ96 375 aa6.32□□□□□ -1.4
SCARB2-226ENST00000640916 DRAM2Q6UX65 266 aa6.32□□□□□ -1.4
SCARB2-226ENST00000640916 LCNL1Q6ZST4 164 aa6.32□□□□□ -1.4
SCARB2-226ENST00000640916 CCDC80Q76M96 950 aa6.32□□□□□ -1.4
SCARB2-226ENST00000640916 TCF23Q7RTU1 214 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms