RNA–Protein interactions for RNA: ENST00000638142.2

SYNGAP1-227, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 2,499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-227ENST00000638142 PGAM5Q96HS1 289 aa17.69■□□□□ 0.42
SYNGAP1-227ENST00000638142 TAF9BQ9HBM6 251 aa17.69■□□□□ 0.42
SYNGAP1-227ENST00000638142 C14orf166Q9Y224 244 aaKnown RBP17.69■□□□□ 0.42
SYNGAP1-227ENST00000638142 PRSS44E7EML9 344 aa17.68■□□□□ 0.42
SYNGAP1-227ENST00000638142 TLX3O43711 291 aaPredicted RBP17.68■□□□□ 0.42
SYNGAP1-227ENST00000638142 NR2C1P13056 603 aa17.68■□□□□ 0.42
SYNGAP1-227ENST00000638142 ZNF84P51523 738 aa17.68■□□□□ 0.42
SYNGAP1-227ENST00000638142 PPA1Q15181 289 aa17.68■□□□□ 0.42
SYNGAP1-227ENST00000638142 CRIP3Q6Q6R5 217 aa17.68■□□□□ 0.42
SYNGAP1-227ENST00000638142 SLC38A9Q8NBW4 561 aa17.68■□□□□ 0.42
SYNGAP1-227ENST00000638142 CMSS1Q9BQ75 279 aaKnown RBP17.68■□□□□ 0.42
SYNGAP1-227ENST00000638142 TM2D1Q9BX74 207 aa17.68■□□□□ 0.42
SYNGAP1-227ENST00000638142 C1orf123Q9NWV4 160 aa17.68■□□□□ 0.42
SYNGAP1-227ENST00000638142 GSKIPQ9P0R6 139 aa17.68■□□□□ 0.42
SYNGAP1-227ENST00000638142 MYOTQ9UBF9 498 aa17.68■□□□□ 0.42
SYNGAP1-227ENST00000638142 HDGFL3Q9Y3E1 203 aa17.68■□□□□ 0.42
SYNGAP1-227ENST00000638142 AQP7P3A6NL99 342 aa17.67■□□□□ 0.42
SYNGAP1-227ENST00000638142 ZFAND5O76080 213 aa17.67■□□□□ 0.42
SYNGAP1-227ENST00000638142 HOXB5P09067 269 aa17.67■□□□□ 0.42
SYNGAP1-227ENST00000638142 MYF5P13349 255 aa17.67■□□□□ 0.42
SYNGAP1-227ENST00000638142 LSM6P62312 80 aaKnown RBP17.67■□□□□ 0.42
SYNGAP1-227ENST00000638142 SLC16A14Q7RTX9 510 aa17.67■□□□□ 0.42
SYNGAP1-227ENST00000638142 C1QL2Q7Z5L3 287 aa17.67■□□□□ 0.42
SYNGAP1-227ENST00000638142 OR5D18Q8NGL1 313 aa17.67■□□□□ 0.42
SYNGAP1-227ENST00000638142 SFT2D1Q8WV19 159 aa17.67■□□□□ 0.42
SYNGAP1-227ENST00000638142 PMS2P1A4D2B8 440 aa17.67■□□□□ 0.42
SYNGAP1-227ENST00000638142 IFNA2P01563 188 aa17.67■□□□□ 0.42
SYNGAP1-227ENST00000638142 MUC1P15941 1255 aaPredicted RBP17.67■□□□□ 0.42
SYNGAP1-227ENST00000638142 FKBP2P26885 142 aaKnown RBP17.67■□□□□ 0.42
SYNGAP1-227ENST00000638142 KCNJ3P48549 501 aa17.67■□□□□ 0.42
SYNGAP1-227ENST00000638142 RPL7L1Q6DKI1 246 aaKnown RBP17.67■□□□□ 0.42
SYNGAP1-227ENST00000638142 TMEM200AQ86VY9 491 aa17.67■□□□□ 0.42
SYNGAP1-227ENST00000638142 LYZL4Q96KX0 146 aa17.67■□□□□ 0.42
SYNGAP1-227ENST00000638142 A0A0U1RQV5 110 aa17.66■□□□□ 0.42
SYNGAP1-227ENST00000638142 E9PLN8 166 aa17.66■□□□□ 0.42
SYNGAP1-227ENST00000638142 STMND1H3BQB6 276 aa17.66■□□□□ 0.42
SYNGAP1-227ENST00000638142 TOX3O15405 576 aaPredicted RBP17.66■□□□□ 0.42
SYNGAP1-227ENST00000638142 RAMP1O60894 148 aa17.66■□□□□ 0.42
SYNGAP1-227ENST00000638142 LRP3O75074 770 aa17.66■□□□□ 0.42
SYNGAP1-227ENST00000638142 HKR1P10072 659 aa17.66■□□□□ 0.42
SYNGAP1-227ENST00000638142 CPT2P23786 658 aa17.66■□□□□ 0.42
SYNGAP1-227ENST00000638142 RBMXP38159 391 aaKnown RBP17.66■□□□□ 0.42
SYNGAP1-227ENST00000638142 SLC25A45Q8N413 288 aa17.66■□□□□ 0.42
SYNGAP1-227ENST00000638142 SLC22A8Q8TCC7 542 aa17.66■□□□□ 0.42
SYNGAP1-227ENST00000638142 PP6455Q8WZ26 134 aa17.66■□□□□ 0.42
SYNGAP1-227ENST00000638142 FAM96BQ9Y3D0 163 aa17.66■□□□□ 0.42
SYNGAP1-227ENST00000638142 CEP290O15078 2479 aa17.66■□□□□ 0.42
SYNGAP1-227ENST00000638142 DHRS3O75911 302 aa17.66■□□□□ 0.42
SYNGAP1-227ENST00000638142 OR2J2O76002 312 aa17.66■□□□□ 0.42
SYNGAP1-227ENST00000638142 SFTPBP07988 381 aa17.66■□□□□ 0.42
SYNGAP1-227ENST00000638142 SRFP11831 508 aa17.66■□□□□ 0.42
SYNGAP1-227ENST00000638142 FOLR2P14207 255 aa17.66■□□□□ 0.42
SYNGAP1-227ENST00000638142 SULT1A2P50226 295 aa17.66■□□□□ 0.42
SYNGAP1-227ENST00000638142 ACY1Q03154 408 aa17.66■□□□□ 0.42
SYNGAP1-227ENST00000638142 CPEB2Q7Z5Q1 589 aaKnown RBP17.66■□□□□ 0.42
SYNGAP1-227ENST00000638142 MAFIPQ8WZ33 124 aa17.66■□□□□ 0.42
SYNGAP1-227ENST00000638142 ZNF775Q96BV0 537 aaPredicted RBP17.66■□□□□ 0.42
SYNGAP1-227ENST00000638142 S100A13Q99584 98 aa17.66■□□□□ 0.42
SYNGAP1-227ENST00000638142 CNTNAP3Q9BZ76 1288 aa17.66■□□□□ 0.42
SYNGAP1-227ENST00000638142 ZNF160Q9HCG1 818 aa17.66■□□□□ 0.42
SYNGAP1-227ENST00000638142 V9GYS6 101 aa17.66■□□□□ 0.42
SYNGAP1-227ENST00000638142 MED6O75586 246 aa17.65■□□□□ 0.42
SYNGAP1-227ENST00000638142 CST4P01036 141 aa17.65■□□□□ 0.42
SYNGAP1-227ENST00000638142 KNG1P01042 644 aa17.65■□□□□ 0.42
SYNGAP1-227ENST00000638142 SERPINA2P20848 420 aa17.65■□□□□ 0.42
SYNGAP1-227ENST00000638142 NFYBP25208 207 aa17.65■□□□□ 0.42
SYNGAP1-227ENST00000638142 ADH6P28332 368 aa17.65■□□□□ 0.42
SYNGAP1-227ENST00000638142 SFTPDP35247 375 aa17.65■□□□□ 0.42
SYNGAP1-227ENST00000638142 PTGER4P35408 488 aa17.65■□□□□ 0.42
SYNGAP1-227ENST00000638142 EIF1P41567 113 aaKnown RBP17.65■□□□□ 0.42
SYNGAP1-227ENST00000638142 LPAR6P43657 344 aa17.65■□□□□ 0.42
SYNGAP1-227ENST00000638142 RBM39Q14498 530 aaKnown RBP17.65■□□□□ 0.42
SYNGAP1-227ENST00000638142 LIN37Q96GY3 246 aaPredicted RBP17.65■□□□□ 0.42
SYNGAP1-227ENST00000638142 RNF122Q9H9V4 155 aa17.65■□□□□ 0.42
SYNGAP1-227ENST00000638142 RRP8O43159 456 aaKnown RBP17.65■□□□□ 0.42
SYNGAP1-227ENST00000638142 ZNF708P17019 499 aa17.65■□□□□ 0.42
SYNGAP1-227ENST00000638142 MSR1P21757 451 aa17.65■□□□□ 0.42
SYNGAP1-227ENST00000638142 GUCA1AP43080 201 aaPredicted RBP17.65■□□□□ 0.42
SYNGAP1-227ENST00000638142 SLC35A1P78382 337 aa17.65■□□□□ 0.42
SYNGAP1-227ENST00000638142 TMEM176BQ3YBM2 270 aaPredicted RBP17.65■□□□□ 0.42
SYNGAP1-227ENST00000638142 NPRL2Q8WTW4 380 aa17.65■□□□□ 0.42
SYNGAP1-227ENST00000638142 CHST5Q9GZS9 411 aa17.65■□□□□ 0.42
SYNGAP1-227ENST00000638142 COLCA2A8K830 154 aa17.64■□□□□ 0.42
SYNGAP1-227ENST00000638142 RNASEK-C17orf49H0YIS7 233 aa17.64■□□□□ 0.42
SYNGAP1-227ENST00000638142 FARS2O95363 451 aaKnown RBP17.64■□□□□ 0.42
SYNGAP1-227ENST00000638142 GAPDHP04406 335 aaKnown RBP17.64■□□□□ 0.42
SYNGAP1-227ENST00000638142 PAX6P26367 422 aa17.64■□□□□ 0.42
SYNGAP1-227ENST00000638142 PEA15Q15121 130 aa17.64■□□□□ 0.42
SYNGAP1-227ENST00000638142 UBE2V2Q15819 145 aa17.64■□□□□ 0.42
SYNGAP1-227ENST00000638142 IAH1Q2TAA2 248 aaPredicted RBP17.64■□□□□ 0.42
SYNGAP1-227ENST00000638142 TMEM268Q5VZI3 342 aa17.64■□□□□ 0.42
SYNGAP1-227ENST00000638142 GJC3Q8NFK1 279 aa17.64■□□□□ 0.42
SYNGAP1-227ENST00000638142 LHX6Q9UPM6 363 aa17.64■□□□□ 0.42
SYNGAP1-227ENST00000638142 POMT1Q9Y6A1 747 aa17.64■□□□□ 0.42
SYNGAP1-227ENST00000638142 C5orf63A6NC05 138 aa17.64■□□□□ 0.41
SYNGAP1-227ENST00000638142 CLDN17P56750 224 aa17.64■□□□□ 0.41
SYNGAP1-227ENST00000638142 DMRTC1Q5HYR2 192 aa17.64■□□□□ 0.41
SYNGAP1-227ENST00000638142 FAM219AQ8IW50 185 aa17.64■□□□□ 0.41
SYNGAP1-227ENST00000638142 FADS6Q8N9I5 356 aa17.64■□□□□ 0.41
SYNGAP1-227ENST00000638142 FNDC9Q8TBE3 224 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms