RNA–Protein interactions for RNA: ENST00000637053.1

VIM-210, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-210ENST00000637053 DCUN1D2Q6PH85 259 aa2.54□□□□□ -2
VIM-210ENST00000637053 OPN5Q6U736 354 aa2.54□□□□□ -2
VIM-210ENST00000637053 PARM1Q6UWI2 310 aa2.54□□□□□ -2
VIM-210ENST00000637053 ADAMTSL5Q6ZMM2 481 aa2.54□□□□□ -2
VIM-210ENST00000637053 RNF165Q6ZSG1 346 aa2.54□□□□□ -2
VIM-210ENST00000637053 RASSF6Q6ZTQ3 369 aa2.54□□□□□ -2
VIM-210ENST00000637053 FAM231DQ6ZW35 169 aa2.54□□□□□ -2
VIM-210ENST00000637053 FA2HQ7L5A8 372 aa2.54□□□□□ -2
VIM-210ENST00000637053 OR4N5Q8IXE1 308 aa2.54□□□□□ -2
VIM-210ENST00000637053 ZNF567Q8N184 647 aa2.54□□□□□ -2
VIM-210ENST00000637053 GPD1LQ8N335 351 aa2.54□□□□□ -2
VIM-210ENST00000637053 SLC35F6Q8N357 371 aa2.54□□□□□ -2
VIM-210ENST00000637053 TMEM86BQ8N661 226 aa2.54□□□□□ -2
VIM-210ENST00000637053 ACBD7Q8N6N7 88 aa2.54□□□□□ -2
VIM-210ENST00000637053 LINC01465Q8N7H1 131 aa2.54□□□□□ -2
VIM-210ENST00000637053 ZNF557Q8N988 423 aaPredicted RBP2.54□□□□□ -2
VIM-210ENST00000637053 UBAC2Q8NBM4 344 aa2.54□□□□□ -2
VIM-210ENST00000637053 B3GALNT2Q8NCR0 500 aa2.54□□□□□ -2
VIM-210ENST00000637053 ZNF740Q8NDX6 193 aa2.54□□□□□ -2
VIM-210ENST00000637053 OR10G4Q8NGN3 311 aa2.54□□□□□ -2
VIM-210ENST00000637053 OR4C6Q8NH72 309 aa2.54□□□□□ -2
VIM-210ENST00000637053 TERB2Q8NHR7 220 aa2.54□□□□□ -2
VIM-210ENST00000637053 RPLP0P6Q8NHW5 317 aa2.54□□□□□ -2
VIM-210ENST00000637053 ARRDC2Q8TBH0 407 aa2.54□□□□□ -2
VIM-210ENST00000637053 ZNF502Q8TBZ5 544 aa2.54□□□□□ -2
VIM-210ENST00000637053 ZFP90Q8TF47 636 aa2.54□□□□□ -2
VIM-210ENST00000637053 DCAKDQ8WVC6 231 aa2.54□□□□□ -2
VIM-210ENST00000637053 LINC00476Q8WZB0 136 aa2.54□□□□□ -2
VIM-210ENST00000637053 RASL10AQ92737 203 aa2.54□□□□□ -2
VIM-210ENST00000637053 RDH5Q92781 318 aa2.54□□□□□ -2
VIM-210ENST00000637053 MRPL24Q96A35 216 aaKnown RBP2.54□□□□□ -2
VIM-210ENST00000637053 APOBEC3DQ96AK3 386 aaPredicted RBP2.54□□□□□ -2
VIM-210ENST00000637053 MOCOSQ96EN8 888 aa2.54□□□□□ -2
VIM-210ENST00000637053 MYEOVQ96EZ4 313 aa2.54□□□□□ -2
VIM-210ENST00000637053 DYNLL2Q96FJ2 89 aa2.54□□□□□ -2
VIM-210ENST00000637053 SCMH1Q96GD3 660 aa2.54□□□□□ -2
VIM-210ENST00000637053 FCRL1Q96LA6 429 aa2.54□□□□□ -2
VIM-210ENST00000637053 BIRC8Q96P09 236 aa2.54□□□□□ -2
VIM-210ENST00000637053 SCGB3A2Q96PL1 93 aa2.54□□□□□ -2
VIM-210ENST00000637053 OR7D2Q96RA2 312 aa2.54□□□□□ -2
VIM-210ENST00000637053 FCRL5Q96RD9 977 aa2.54□□□□□ -2
VIM-210ENST00000637053 CDX2Q99626 313 aaPredicted RBP2.54□□□□□ -2
VIM-210ENST00000637053 RASL11BQ9BPW5 248 aa2.54□□□□□ -2
VIM-210ENST00000637053 PDCD1LG2Q9BQ51 273 aa2.54□□□□□ -2
VIM-210ENST00000637053 C20orf144Q9BQM9 153 aa2.54□□□□□ -2
VIM-210ENST00000637053 MARVELD1Q9BSK0 173 aa2.54□□□□□ -2
VIM-210ENST00000637053 EFCAB11Q9BUY7 163 aa2.54□□□□□ -2
VIM-210ENST00000637053 TMEM59Q9BXS4 323 aa2.54□□□□□ -2
VIM-210ENST00000637053 ALOXE3Q9BYJ1 711 aa2.54□□□□□ -2
VIM-210ENST00000637053 KRTAP4-4Q9BYR3 166 aa2.54□□□□□ -2
VIM-210ENST00000637053 SLC29A3Q9BZD2 475 aa2.54□□□□□ -2
VIM-210ENST00000637053 SHARPINQ9H0F6 387 aa2.54□□□□□ -2
VIM-210ENST00000637053 ARRDC1-AS1Q9H2J1 176 aa2.54□□□□□ -2
VIM-210ENST00000637053 CWH43Q9H720 699 aa2.54□□□□□ -2
VIM-210ENST00000637053 ZDHHC11Q9H8X9 412 aa2.54□□□□□ -2
VIM-210ENST00000637053 ZNF556Q9HAH1 456 aa2.54□□□□□ -2
VIM-210ENST00000637053 ADGRL4Q9HBW9 690 aa2.54□□□□□ -2
VIM-210ENST00000637053 APOBEC3GQ9HC16 384 aaKnown RBP2.54□□□□□ -2
VIM-210ENST00000637053 IDI2-AS1Q9NZ38 188 aa2.54□□□□□ -2
VIM-210ENST00000637053 THYN1Q9P016 225 aa2.54□□□□□ -2
VIM-210ENST00000637053 DOK5Q9P104 306 aa2.54□□□□□ -2
VIM-210ENST00000637053 HSPB8Q9UJY1 196 aa2.54□□□□□ -2
VIM-210ENST00000637053 FBXL2Q9UKC9 423 aa2.54□□□□□ -2
VIM-210ENST00000637053 SSR3Q9UNL2 185 aa2.54□□□□□ -2
VIM-210ENST00000637053 ASF1AQ9Y294 204 aa2.54□□□□□ -2
VIM-210ENST00000637053 ZFP30Q9Y2G7 519 aa2.54□□□□□ -2
VIM-210ENST00000637053 EXOSC1Q9Y3B2 195 aaKnown RBP2.54□□□□□ -2
VIM-210ENST00000637053 KLF12Q9Y4X4 402 aa2.54□□□□□ -2
VIM-210ENST00000637053 TTC37Q6PGP7 1564 aa2.53□□□□□ -2
VIM-210ENST00000637053 TRBV5-7A0A0A0MS05 114 aa2.53□□□□□ -2
VIM-210ENST00000637053 IGHV2-70DA0A0C4DH43 119 aa2.53□□□□□ -2
VIM-210ENST00000637053 MED19A0JLT2 244 aaPredicted RBP2.53□□□□□ -2
VIM-210ENST00000637053 OR5B21A6NL26 309 aa2.53□□□□□ -2
VIM-210ENST00000637053 FAM166BA8MTA8 275 aa2.53□□□□□ -2
VIM-210ENST00000637053 MPTX1A8MV57 137 aa2.53□□□□□ -2
VIM-210ENST00000637053 GFYI3L273 518 aa2.53□□□□□ -2
VIM-210ENST00000637053 ZNF593O00488 134 aaPredicted RBP2.53□□□□□ -2
VIM-210ENST00000637053 HSPB6O14558 160 aa2.53□□□□□ -2
VIM-210ENST00000637053 CXCL13O43927 109 aa2.53□□□□□ -2
VIM-210ENST00000637053 EEDO75530 441 aaKnown RBP2.53□□□□□ -2
VIM-210ENST00000637053 STK16O75716 305 aa2.53□□□□□ -2
VIM-210ENST00000637053 GPANK1O95872 356 aa2.53□□□□□ -2
VIM-210ENST00000637053 APOHP02749 345 aaPredicted RBP2.53□□□□□ -2
VIM-210ENST00000637053 UBBP0CG47 229 aa2.53□□□□□ -2
VIM-210ENST00000637053 BCKDHAP12694 445 aa2.53□□□□□ -2
VIM-210ENST00000637053 HSD17B1P14061 328 aa2.53□□□□□ -2
VIM-210ENST00000637053 ZNF30P17039 623 aa2.53□□□□□ -2
VIM-210ENST00000637053 HOXB6P17509 224 aaKnown RBP2.53□□□□□ -2
VIM-210ENST00000637053 RPL35AP18077 110 aaKnown RBP2.53□□□□□ -2
VIM-210ENST00000637053 MYL12AP19105 171 aa2.53□□□□□ -2
VIM-210ENST00000637053 PCSK6P29122 969 aa2.53□□□□□ -2
VIM-210ENST00000637053 TNFSF8P32971 234 aa2.53□□□□□ -2
VIM-210ENST00000637053 HRH1P35367 487 aa2.53□□□□□ -2
VIM-210ENST00000637053 RPL4P36578 427 aaKnown RBP2.53□□□□□ -2
VIM-210ENST00000637053 OR1E2P47887 323 aa2.53□□□□□ -2
VIM-210ENST00000637053 GZMMP51124 257 aa2.53□□□□□ -2
VIM-210ENST00000637053 PDX1P52945 283 aa2.53□□□□□ -2
VIM-210ENST00000637053 DLX1P56177 255 aa2.53□□□□□ -2
VIM-210ENST00000637053 RIPPLY3P57055 190 aa2.53□□□□□ -2
VIM-210ENST00000637053 FBXW4P57775 412 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms