RNA–Protein interactions for RNA: ENST00000630925.1

SDCBP-213, Transcript of syndecan binding protein, humanhuman

TSL 5 BASIC

Gene SDCBP, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-213ENST00000630925 GABRG3Q99928 467 aa4.12□□□□□ -1.75
SDCBP-213ENST00000630925 CHST5Q9GZS9 411 aa4.12□□□□□ -1.75
SDCBP-213ENST00000630925 OR51I1Q9H343 314 aa4.12□□□□□ -1.75
SDCBP-213ENST00000630925 EBF2Q9HAK2 575 aa4.12□□□□□ -1.75
SDCBP-213ENST00000630925 FBXL4Q9UKA2 621 aa4.12□□□□□ -1.75
SDCBP-213ENST00000630925 KDM3BQ7LBC6 1761 aa4.12□□□□□ -1.75
SDCBP-213ENST00000630925 ZNF816-ZNF321PA0A0X1KG74 233 aa4.12□□□□□ -1.75
SDCBP-213ENST00000630925 WDR27A2RRH5 827 aa4.12□□□□□ -1.75
SDCBP-213ENST00000630925 CCDC160A6NGH7 325 aa4.12□□□□□ -1.75
SDCBP-213ENST00000630925 C5orf58C9J3I9 102 aa4.12□□□□□ -1.75
SDCBP-213ENST00000630925 H7C2Y5 167 aa4.12□□□□□ -1.75
SDCBP-213ENST00000630925 CDC7O00311 574 aa4.12□□□□□ -1.75
SDCBP-213ENST00000630925 RGS5O15539 181 aa4.12□□□□□ -1.75
SDCBP-213ENST00000630925 PPIHO43447 177 aaKnown RBP4.12□□□□□ -1.75
SDCBP-213ENST00000630925 SPRY3O43610 288 aa4.12□□□□□ -1.75
SDCBP-213ENST00000630925 CA11O75493 328 aa4.12□□□□□ -1.75
SDCBP-213ENST00000630925 LYPD3O95274 346 aa4.12□□□□□ -1.75
SDCBP-213ENST00000630925 SLURP2P0DP57 97 aa4.12□□□□□ -1.75
SDCBP-213ENST00000630925 SDC1P18827 310 aa4.12□□□□□ -1.75
SDCBP-213ENST00000630925 PAX6P26367 422 aa4.12□□□□□ -1.75
SDCBP-213ENST00000630925 MARK3P27448 753 aa4.12□□□□□ -1.75
SDCBP-213ENST00000630925 TNFSF8P32971 234 aa4.12□□□□□ -1.75
SDCBP-213ENST00000630925 RPL35P42766 123 aaKnown RBP4.12□□□□□ -1.75
SDCBP-213ENST00000630925 GCLMP48507 274 aa4.12□□□□□ -1.75
SDCBP-213ENST00000630925 CKS1BP61024 79 aa4.12□□□□□ -1.75
SDCBP-213ENST00000630925 RPL27P61353 136 aaKnown RBP4.12□□□□□ -1.75
SDCBP-213ENST00000630925 PSG4Q00888 419 aa4.12□□□□□ -1.75
SDCBP-213ENST00000630925 PPP1R1AQ13522 171 aa4.12□□□□□ -1.75
SDCBP-213ENST00000630925 CYBRD1Q53TN4 286 aa4.12□□□□□ -1.75
SDCBP-213ENST00000630925 ALG10Q5BKT4 473 aa4.12□□□□□ -1.75
SDCBP-213ENST00000630925 ALG10BQ5I7T1 473 aa4.12□□□□□ -1.75
SDCBP-213ENST00000630925 C1QL3Q5VWW1 255 aa4.12□□□□□ -1.75
SDCBP-213ENST00000630925 HBMQ6B0K9 141 aa4.12□□□□□ -1.75
SDCBP-213ENST00000630925 SHFQ7M4L6 423 aa4.12□□□□□ -1.75
SDCBP-213ENST00000630925 Q8N3U1 123 aa4.12□□□□□ -1.75
SDCBP-213ENST00000630925 EID2Q8N6I1 236 aa4.12□□□□□ -1.75
SDCBP-213ENST00000630925 TEX45Q8NA69 505 aa4.12□□□□□ -1.75
SDCBP-213ENST00000630925 OR13G1Q8NGZ3 307 aa4.12□□□□□ -1.75
SDCBP-213ENST00000630925 SPATA3Q8NHX4 192 aa4.12□□□□□ -1.75
SDCBP-213ENST00000630925 C8orf46Q8TAG6 207 aa4.12□□□□□ -1.75
SDCBP-213ENST00000630925 OLIG1Q8TAK6 271 aa4.12□□□□□ -1.75
SDCBP-213ENST00000630925 SPPL2BQ8TCT7 592 aa4.12□□□□□ -1.75
SDCBP-213ENST00000630925 DOK4Q8TEW6 326 aa4.12□□□□□ -1.75
SDCBP-213ENST00000630925 C1orf54Q8WWF1 131 aa4.12□□□□□ -1.75
SDCBP-213ENST00000630925 RASL11BQ9BPW5 248 aa4.12□□□□□ -1.75
SDCBP-213ENST00000630925 TMEM59Q9BXS4 323 aa4.12□□□□□ -1.75
SDCBP-213ENST00000630925 ABCG5Q9H222 651 aa4.12□□□□□ -1.75
SDCBP-213ENST00000630925 RPF2Q9H7B2 306 aaKnown RBP4.12□□□□□ -1.75
SDCBP-213ENST00000630925 FAM206AQ9NX38 181 aa4.12□□□□□ -1.75
SDCBP-213ENST00000630925 OR1A1Q9P1Q5 309 aa4.12□□□□□ -1.75
SDCBP-213ENST00000630925 OR12D3Q9UGF7 316 aa4.12□□□□□ -1.75
SDCBP-213ENST00000630925 PSG8Q9UQ74 426 aa4.12□□□□□ -1.75
SDCBP-213ENST00000630925 TRAPPC4Q9Y296 219 aa4.12□□□□□ -1.75
SDCBP-213ENST00000630925 CACNA1GO43497 2377 aa4.12□□□□□ -1.75
SDCBP-213ENST00000630925 YLPM1P49750 1951 aaKnown RBP4.11□□□□□ -1.75
SDCBP-213ENST00000630925 TRGV11A0A075B6L2 103 aa4.11□□□□□ -1.75
SDCBP-213ENST00000630925 TRBV5-5A0A0J9YX44 114 aa4.11□□□□□ -1.75
SDCBP-213ENST00000630925 FAM172BPA6NC97 362 aa4.11□□□□□ -1.75
SDCBP-213ENST00000630925 OR5B21A6NL26 309 aa4.11□□□□□ -1.75
SDCBP-213ENST00000630925 H3BMQ9 156 aa4.11□□□□□ -1.75
SDCBP-213ENST00000630925 BMP15O95972 392 aa4.11□□□□□ -1.75
SDCBP-213ENST00000630925 H1F0P07305 194 aaKnown RBP4.11□□□□□ -1.75
SDCBP-213ENST00000630925 CRYGDP07320 174 aa4.11□□□□□ -1.75
SDCBP-213ENST00000630925 OR56A5P0C7T3 313 aa4.11□□□□□ -1.75
SDCBP-213ENST00000630925 MUC1P15941 1255 aaPredicted RBP4.11□□□□□ -1.75
SDCBP-213ENST00000630925 HRH1P35367 487 aa4.11□□□□□ -1.75
SDCBP-213ENST00000630925 BACE1P56817 501 aa4.11□□□□□ -1.75
SDCBP-213ENST00000630925 OR1D5P58170 312 aa4.11□□□□□ -1.75
SDCBP-213ENST00000630925 TGFBR3Q03167 851 aa4.11□□□□□ -1.75
SDCBP-213ENST00000630925 EMX2Q04743 252 aa4.11□□□□□ -1.75
SDCBP-213ENST00000630925 SLC9C1Q4G0N8 1177 aa4.11□□□□□ -1.75
SDCBP-213ENST00000630925 AWAT1Q58HT5 328 aa4.11□□□□□ -1.75
SDCBP-213ENST00000630925 TMEM128Q5BJH2 165 aa4.11□□□□□ -1.75
SDCBP-213ENST00000630925 HENMT1Q5T8I9 393 aaKnown RBP4.11□□□□□ -1.75
SDCBP-213ENST00000630925 BAIAP2L2Q6UXY1 529 aa4.11□□□□□ -1.75
SDCBP-213ENST00000630925 BHLHA9Q7RTU4 235 aa4.11□□□□□ -1.75
SDCBP-213ENST00000630925 SLC16A13Q7RTY0 426 aa4.11□□□□□ -1.75
SDCBP-213ENST00000630925 B3GNT8Q7Z7M8 397 aa4.11□□□□□ -1.75
SDCBP-213ENST00000630925 SPICQ8N5J4 248 aa4.11□□□□□ -1.75
SDCBP-213ENST00000630925 AQP11Q8NBQ7 271 aa4.11□□□□□ -1.75
SDCBP-213ENST00000630925 OR7A2PQ8NGA2 310 aa4.11□□□□□ -1.75
SDCBP-213ENST00000630925 OR52B6Q8NGF0 335 aa4.11□□□□□ -1.75
SDCBP-213ENST00000630925 OR51S1Q8NGJ8 323 aa4.11□□□□□ -1.75
SDCBP-213ENST00000630925 OR4P4Q8NGL7 312 aa4.11□□□□□ -1.75
SDCBP-213ENST00000630925 OR4S2Q8NH73 311 aa4.11□□□□□ -1.75
SDCBP-213ENST00000630925 SEH1LQ96EE3 360 aa4.11□□□□□ -1.75
SDCBP-213ENST00000630925 MOCOSQ96EN8 888 aa4.11□□□□□ -1.75
SDCBP-213ENST00000630925 DYNLL2Q96FJ2 89 aa4.11□□□□□ -1.75
SDCBP-213ENST00000630925 COL21A1Q96P44 957 aa4.11□□□□□ -1.75
SDCBP-213ENST00000630925 SCGB3A2Q96PL1 93 aa4.11□□□□□ -1.75
SDCBP-213ENST00000630925 RCHY1Q96PM5 261 aa4.11□□□□□ -1.75
SDCBP-213ENST00000630925 SERPINI1Q99574 410 aa4.11□□□□□ -1.75
SDCBP-213ENST00000630925 CDX2Q99626 313 aaPredicted RBP4.11□□□□□ -1.75
SDCBP-213ENST00000630925 TM2D2Q9BX73 214 aa4.11□□□□□ -1.75
SDCBP-213ENST00000630925 PNRC2Q9NPJ4 139 aaKnown RBP4.11□□□□□ -1.75
SDCBP-213ENST00000630925 GALPQ9UBC7 116 aa4.11□□□□□ -1.75
SDCBP-213ENST00000630925 CHST2Q9Y4C5 530 aa4.11□□□□□ -1.75
SDCBP-213ENST00000630925 TJP1Q07157 1748 aa4.11□□□□□ -1.75
SDCBP-213ENST00000630925 EXOC1LA0A1B0GW35 172 aa4.1□□□□□ -1.75
SDCBP-213ENST00000630925 HMX2A2RU54 273 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms