RNA–Protein interactions for RNA: ENST00000623461.3

VCL-206, Transcript of vinculin, humanhuman

TSL 1 (best)

Gene VCL, Length 7,995 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-206ENST00000623461 NXPH2O95156 264 aa8.01□□□□□ -1.13
VCL-206ENST00000623461 ICAM2P13598 275 aa8.01□□□□□ -1.13
VCL-206ENST00000623461 GLRA1P23415 457 aa8.01□□□□□ -1.13
VCL-206ENST00000623461 OPRM1P35372 400 aa8.01□□□□□ -1.13
VCL-206ENST00000623461 GUCA2BQ16661 112 aa8.01□□□□□ -1.13
VCL-206ENST00000623461 RPEL1Q2QD12 228 aa8.01□□□□□ -1.13
VCL-206ENST00000623461 PRAMEF5Q5TYX0 476 aa8.01□□□□□ -1.13
VCL-206ENST00000623461 PRAMEF6Q5VXH4 476 aa8.01□□□□□ -1.13
VCL-206ENST00000623461 LAIR1Q6GTX8 287 aa8.01□□□□□ -1.13
VCL-206ENST00000623461 DGAT2L6Q6ZPD8 337 aa8.01□□□□□ -1.13
VCL-206ENST00000623461 LRP12Q9Y561 859 aa8.01□□□□□ -1.13
VCL-206ENST00000623461 NPIPB8E9PQR5 432 aa8.01□□□□□ -1.13
VCL-206ENST00000623461 CST7O76096 145 aa8.01□□□□□ -1.13
VCL-206ENST00000623461 CSNK1EP49674 416 aaKnown RBP8.01□□□□□ -1.13
VCL-206ENST00000623461 SMAD2Q15796 467 aaKnown RBP8.01□□□□□ -1.13
VCL-206ENST00000623461 DEGS2Q6QHC5 323 aa8.01□□□□□ -1.13
VCL-206ENST00000623461 CA10Q9NS85 328 aa8.01□□□□□ -1.13
VCL-206ENST00000623461 NAT8BQ9UHF3 227 aa8.01□□□□□ -1.13
VCL-206ENST00000623461 SLC17A4Q9Y2C5 497 aa8.01□□□□□ -1.13
VCL-206ENST00000623461 DVL1O14640 695 aa8.01□□□□□ -1.13
VCL-206ENST00000623461 PPM1DO15297 605 aa8.01□□□□□ -1.13
VCL-206ENST00000623461 ZNF207O43670 478 aaKnown RBP8.01□□□□□ -1.13
VCL-206ENST00000623461 CD1AP06126 327 aa8.01□□□□□ -1.13
VCL-206ENST00000623461 CRISP2P16562 243 aa8.01□□□□□ -1.13
VCL-206ENST00000623461 EMDP50402 254 aa8.01□□□□□ -1.13
VCL-206ENST00000623461 DHRS7BQ6IAN0 325 aaPredicted RBP8.01□□□□□ -1.13
VCL-206ENST00000623461 OR5C1Q8NGR4 320 aa8.01□□□□□ -1.13
VCL-206ENST00000623461 WDR34Q96EX3 536 aa8.01□□□□□ -1.13
VCL-206ENST00000623461 FCN1O00602 326 aa8.01□□□□□ -1.13
VCL-206ENST00000623461 CIDEAO60543 219 aa8.01□□□□□ -1.13
VCL-206ENST00000623461 OPN1LWP04000 364 aa8.01□□□□□ -1.13
VCL-206ENST00000623461 GLI4P10075 376 aa8.01□□□□□ -1.13
VCL-206ENST00000623461 CD22P20273 847 aa8.01□□□□□ -1.13
VCL-206ENST00000623461 ENPP1P22413 925 aa8.01□□□□□ -1.13
VCL-206ENST00000623461 OR5I1Q13606 314 aa8.01□□□□□ -1.13
VCL-206ENST00000623461 ZNF600Q6ZNG1 722 aa8.01□□□□□ -1.13
VCL-206ENST00000623461 UBE3DQ7Z6J8 389 aa8.01□□□□□ -1.13
VCL-206ENST00000623461 LRP11Q86VZ4 500 aa8.01□□□□□ -1.13
VCL-206ENST00000623461 LSRQ86X29 649 aaPredicted RBP8.01□□□□□ -1.13
VCL-206ENST00000623461 MAML2Q8IZL2 1156 aaPredicted RBP8.01□□□□□ -1.13
VCL-206ENST00000623461 OSR2Q8N2R0 312 aa8.01□□□□□ -1.13
VCL-206ENST00000623461 OR5AU1Q8NGC0 362 aa8.01□□□□□ -1.13
VCL-206ENST00000623461 ST8SIA1Q92185 356 aa8.01□□□□□ -1.13
VCL-206ENST00000623461 PRSS50Q9UI38 385 aa8.01□□□□□ -1.13
VCL-206ENST00000623461 PPP1R3CQ9UQK1 317 aa8.01□□□□□ -1.13
VCL-206ENST00000623461 PLSCR5A0PG75 271 aa8.01□□□□□ -1.13
VCL-206ENST00000623461 M0R1X1 148 aa8.01□□□□□ -1.13
VCL-206ENST00000623461 VAMP5O95183 116 aa8.01□□□□□ -1.13
VCL-206ENST00000623461 CTSDP07339 412 aaPredicted RBP8.01□□□□□ -1.13
VCL-206ENST00000623461 CYBAP13498 195 aa8.01□□□□□ -1.13
VCL-206ENST00000623461 GZMMP51124 257 aa8.01□□□□□ -1.13
VCL-206ENST00000623461 ATP6V1FQ16864 119 aa8.01□□□□□ -1.13
VCL-206ENST00000623461 ERGIC1Q969X5 290 aa8.01□□□□□ -1.13
VCL-206ENST00000623461 VAX2Q9UIW0 290 aa8.01□□□□□ -1.13
VCL-206ENST00000623461 OR2J2O76002 312 aa8.01□□□□□ -1.13
VCL-206ENST00000623461 PPICP45877 212 aa8.01□□□□□ -1.13
VCL-206ENST00000623461 ERVS71-1P61550 626 aa8.01□□□□□ -1.13
VCL-206ENST00000623461 NEIL1Q96FI4 390 aaPredicted RBP8.01□□□□□ -1.13
VCL-206ENST00000623461 ZFP64Q9NPA5 681 aa8.01□□□□□ -1.13
VCL-206ENST00000623461 YIF1AO95070 293 aa8□□□□□ -1.13
VCL-206ENST00000623461 DAOP14920 347 aa8□□□□□ -1.13
VCL-206ENST00000623461 TBXA2RP21731 343 aa8□□□□□ -1.13
VCL-206ENST00000623461 TAS2R60P59551 318 aa8□□□□□ -1.13
VCL-206ENST00000623461 PAFAH1B2P68402 229 aa8□□□□□ -1.13
VCL-206ENST00000623461 NKAIN2Q5VXU1 208 aa8□□□□□ -1.13
VCL-206ENST00000623461 KIRREL2Q6UWL6 708 aa8□□□□□ -1.13
VCL-206ENST00000623461 DLK2Q6UY11 383 aa8□□□□□ -1.13
VCL-206ENST00000623461 CNRIP1Q96F85 164 aaPredicted RBP8□□□□□ -1.13
VCL-206ENST00000623461 UBR3Q6ZT12 1888 aa8□□□□□ -1.13
VCL-206ENST00000623461 UBE2L5PA0A1B0GUS4 154 aa8□□□□□ -1.13
VCL-206ENST00000623461 CNN1P51911 297 aaKnown RBP8□□□□□ -1.13
VCL-206ENST00000623461 JMJD6Q6NYC1 403 aaPredicted RBP8□□□□□ -1.13
VCL-206ENST00000623461 DRAM2Q6UX65 266 aa8□□□□□ -1.13
VCL-206ENST00000623461 TMEM91Q6ZNR0 172 aa8□□□□□ -1.13
VCL-206ENST00000623461 TRMT61AQ96FX7 289 aaKnown RBP8□□□□□ -1.13
VCL-206ENST00000623461 ZNF764Q96H86 408 aaPredicted RBP8□□□□□ -1.13
VCL-206ENST00000623461 HIF1ANQ9NWT6 349 aa8□□□□□ -1.13
VCL-206ENST00000623461 CDX1P47902 265 aaPredicted RBP8□□□□□ -1.13
VCL-206ENST00000623461 FAM26DQ5JW98 314 aa8□□□□□ -1.13
VCL-206ENST00000623461 LDLRAD3Q86YD5 345 aa8□□□□□ -1.13
VCL-206ENST00000623461 MORN4Q8NDC4 146 aa8□□□□□ -1.13
VCL-206ENST00000623461 NT5CQ8TCD5 201 aa8□□□□□ -1.13
VCL-206ENST00000623461 LIPGQ9Y5X9 500 aa8□□□□□ -1.13
VCL-206ENST00000623461 RGPD3A6NKT7 1758 aaPredicted RBP8□□□□□ -1.13
VCL-206ENST00000623461 PSME4Q14997 1843 aa8□□□□□ -1.13
VCL-206ENST00000623461 AKR7A3O95154 331 aa8□□□□□ -1.13
VCL-206ENST00000623461 FAM78BQ5VT40 261 aa8□□□□□ -1.13
VCL-206ENST00000623461 DEFB119Q8N690 84 aa8□□□□□ -1.13
VCL-206ENST00000623461 FGF17O60258 216 aa8□□□□□ -1.13
VCL-206ENST00000623461 OR5AC1P0C628 307 aa8□□□□□ -1.13
VCL-206ENST00000623461 EN2P19622 333 aaPredicted RBP8□□□□□ -1.13
VCL-206ENST00000623461 PLAC9Q5JTB6 97 aa8□□□□□ -1.13
VCL-206ENST00000623461 TEX30Q5JUR7 227 aa8□□□□□ -1.13
VCL-206ENST00000623461 LYRM7Q5U5X0 104 aa8□□□□□ -1.13
VCL-206ENST00000623461 MCHR2Q969V1 340 aa8□□□□□ -1.13
VCL-206ENST00000623461 CCDC74BQ96LY2 380 aa8□□□□□ -1.13
VCL-206ENST00000623461 RTTNQ86VV8 2226 aa8□□□□□ -1.13
VCL-206ENST00000623461 TAF1P21675 1872 aa8□□□□□ -1.13
VCL-206ENST00000623461 M0R135 149 aa8□□□□□ -1.13
VCL-206ENST00000623461 FAM3BP58499 235 aaPredicted RBP8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms