RNA–Protein interactions for RNA: ENST00000623007.3

LDB3-208, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-208ENST00000623007 B3GNT2Q9NY97 397 aa14.19□□□□□ -0.14
LDB3-208ENST00000623007 NKIRAS2Q9NYR9 191 aa14.19□□□□□ -0.14
LDB3-208ENST00000623007 ANAPC10Q9UM13 185 aa14.19□□□□□ -0.14
LDB3-208ENST00000623007 NOP16Q9Y3C1 178 aaKnown RBP14.19□□□□□ -0.14
LDB3-208ENST00000623007 IL18BPO95998 194 aa14.18□□□□□ -0.14
LDB3-208ENST00000623007 SULT1A3P0DMM9 295 aa14.18□□□□□ -0.14
LDB3-208ENST00000623007 SULT1A4P0DMN0 295 aa14.18□□□□□ -0.14
LDB3-208ENST00000623007 HOXC12P31275 282 aa14.18□□□□□ -0.14
LDB3-208ENST00000623007 GK2Q14410 553 aaPredicted RBP14.18□□□□□ -0.14
LDB3-208ENST00000623007 KCNJ8Q15842 424 aa14.18□□□□□ -0.14
LDB3-208ENST00000623007 KRTCAP3Q53RY4 240 aa14.18□□□□□ -0.14
LDB3-208ENST00000623007 C1orf174Q8IYL3 243 aa14.18□□□□□ -0.14
LDB3-208ENST00000623007 SAXO1Q8IYX7 474 aa14.18□□□□□ -0.14
LDB3-208ENST00000623007 C17orf78Q8N4C9 275 aa14.18□□□□□ -0.14
LDB3-208ENST00000623007 SPICQ8N5J4 248 aa14.18□□□□□ -0.14
LDB3-208ENST00000623007 SCGB3A2Q96PL1 93 aa14.18□□□□□ -0.14
LDB3-208ENST00000623007 SPACA5Q96QH8 159 aa14.18□□□□□ -0.14
LDB3-208ENST00000623007 OCSTAMPQ9BR26 566 aa14.18□□□□□ -0.14
LDB3-208ENST00000623007 C12orf49Q9H741 205 aa14.18□□□□□ -0.14
LDB3-208ENST00000623007 GPR173Q9NS66 373 aa14.18□□□□□ -0.14
LDB3-208ENST00000623007 MYEF2Q9P2K5 600 aaKnown RBP14.18□□□□□ -0.14
LDB3-208ENST00000623007 PRSS50Q9UI38 385 aa14.18□□□□□ -0.14
LDB3-208ENST00000623007 HSF4Q9ULV5 492 aa14.18□□□□□ -0.14
LDB3-208ENST00000623007 SPEGQ15772 3267 aa14.18□□□□□ -0.14
LDB3-208ENST00000623007 LOC100509620A0A075B734 347 aa14.17□□□□□ -0.14
LDB3-208ENST00000623007 C5orf63A6NC05 138 aa14.17□□□□□ -0.14
LDB3-208ENST00000623007 FAM172BPA6NC97 362 aa14.17□□□□□ -0.14
LDB3-208ENST00000623007 MFNGO00587 321 aa14.17□□□□□ -0.14
LDB3-208ENST00000623007 AMY2AP04746 511 aa14.17□□□□□ -0.14
LDB3-208ENST00000623007 IFNA6P05013 189 aa14.17□□□□□ -0.14
LDB3-208ENST00000623007 EDN3P14138 238 aa14.17□□□□□ -0.14
LDB3-208ENST00000623007 CDK10Q15131 360 aa14.17□□□□□ -0.14
LDB3-208ENST00000623007 NSUN5P2Q63ZY6 315 aa14.17□□□□□ -0.14
LDB3-208ENST00000623007 ZNF626Q68DY1 528 aa14.17□□□□□ -0.14
LDB3-208ENST00000623007 ARRDC1Q8N5I2 433 aa14.17□□□□□ -0.14
LDB3-208ENST00000623007 ZDHHC22Q8N966 263 aa14.17□□□□□ -0.14
LDB3-208ENST00000623007 TMEM104Q8NE00 496 aa14.17□□□□□ -0.14
LDB3-208ENST00000623007 OR51S1Q8NGJ8 323 aa14.17□□□□□ -0.14
LDB3-208ENST00000623007 EIF3KQ9UBQ5 218 aaKnown RBP14.17□□□□□ -0.14
LDB3-208ENST00000623007 EDARQ9UNE0 448 aa14.17□□□□□ -0.14
LDB3-208ENST00000623007 SSUH2Q9Y2M2 353 aa14.17□□□□□ -0.14
LDB3-208ENST00000623007 FAM90A10PA6NDY2 464 aa14.17□□□□□ -0.14
LDB3-208ENST00000623007 FAM90A18PA6NE21 464 aa14.17□□□□□ -0.14
LDB3-208ENST00000623007 FAM90A16PA6NEW6 464 aa14.17□□□□□ -0.14
LDB3-208ENST00000623007 FAM90A20PA6NIJ5 464 aa14.17□□□□□ -0.14
LDB3-208ENST00000623007 FAM90A8PA6NJQ4 464 aa14.17□□□□□ -0.14
LDB3-208ENST00000623007 FAM90A7PA6NKC0 464 aa14.17□□□□□ -0.14
LDB3-208ENST00000623007 FAM90A22PA8MWA6 464 aa14.17□□□□□ -0.14
LDB3-208ENST00000623007 FAM90A12PA8MX19 464 aa14.17□□□□□ -0.14
LDB3-208ENST00000623007 FAM90A5PA8MXJ8 464 aa14.17□□□□□ -0.14
LDB3-208ENST00000623007 FAM90A23PA8MXZ1 464 aa14.17□□□□□ -0.14
LDB3-208ENST00000623007 WDR1O75083 606 aa14.17□□□□□ -0.14
LDB3-208ENST00000623007 TPOP07202 933 aa14.17□□□□□ -0.14
LDB3-208ENST00000623007 FAM90A15PP0C7V4 464 aa14.17□□□□□ -0.14
LDB3-208ENST00000623007 FAM90A13PP0C7W8 464 aa14.17□□□□□ -0.14
LDB3-208ENST00000623007 FAM90A14PP0C7W9 464 aa14.17□□□□□ -0.14
LDB3-208ENST00000623007 FAM90A24PP0C7X0 464 aa14.17□□□□□ -0.14
LDB3-208ENST00000623007 GNB3P16520 340 aa14.17□□□□□ -0.14
LDB3-208ENST00000623007 SERPINA2P20848 420 aa14.17□□□□□ -0.14
LDB3-208ENST00000623007 PMELP40967 661 aa14.17□□□□□ -0.14
LDB3-208ENST00000623007 GZMKP49863 264 aa14.17□□□□□ -0.14
LDB3-208ENST00000623007 TAS2R46P59540 309 aa14.17□□□□□ -0.14
LDB3-208ENST00000623007 TMEM255AQ5JRV8 349 aa14.17□□□□□ -0.14
LDB3-208ENST00000623007 C9orf135Q5VTT2 229 aa14.17□□□□□ -0.14
LDB3-208ENST00000623007 PLCXD3Q63HM9 321 aa14.17□□□□□ -0.14
LDB3-208ENST00000623007 FAHD2BQ6P2I3 314 aaPredicted RBP14.17□□□□□ -0.14
LDB3-208ENST00000623007 TMEM17Q86X19 198 aa14.17□□□□□ -0.14
LDB3-208ENST00000623007 BPIFB2Q8N4F0 458 aa14.17□□□□□ -0.14
LDB3-208ENST00000623007 OR8S1Q8NH09 359 aa14.17□□□□□ -0.14
LDB3-208ENST00000623007 SNAPC3Q92966 411 aa14.17□□□□□ -0.14
LDB3-208ENST00000623007 FAHD2AQ96GK7 314 aa14.17□□□□□ -0.14
LDB3-208ENST00000623007 HIST1H2AAQ96QV6 131 aa14.17□□□□□ -0.14
LDB3-208ENST00000623007 NKX3-1Q99801 234 aaPredicted RBP14.17□□□□□ -0.14
LDB3-208ENST00000623007 ELL3Q9HB65 397 aaPredicted RBP14.17□□□□□ -0.14
LDB3-208ENST00000623007 KLK13Q9UKR3 277 aa14.17□□□□□ -0.14
LDB3-208ENST00000623007 MPC1Q9Y5U8 109 aa14.17□□□□□ -0.14
LDB3-208ENST00000623007 MEIKINA0A087WXM9 373 aa14.16□□□□□ -0.14
LDB3-208ENST00000623007 ANOS1P23352 680 aa14.16□□□□□ -0.14
LDB3-208ENST00000623007 ECI1P42126 302 aa14.16□□□□□ -0.14
LDB3-208ENST00000623007 TNK1Q13470 666 aa14.16□□□□□ -0.14
LDB3-208ENST00000623007 ARFRP1Q13795 201 aa14.16□□□□□ -0.14
LDB3-208ENST00000623007 ST3GAL2Q16842 350 aa14.16□□□□□ -0.14
LDB3-208ENST00000623007 ACSF3Q4G176 576 aaPredicted RBP14.16□□□□□ -0.14
LDB3-208ENST00000623007 VAX1Q5SQQ9 334 aa14.16□□□□□ -0.14
LDB3-208ENST00000623007 IDO2Q6ZQW0 420 aa14.16□□□□□ -0.14
LDB3-208ENST00000623007 MOB3CQ70IA8 216 aa14.16□□□□□ -0.14
LDB3-208ENST00000623007 FYTTD1Q96QD9 318 aaKnown RBP14.16□□□□□ -0.14
LDB3-208ENST00000623007 RHOFQ9HBH0 211 aa14.16□□□□□ -0.14
LDB3-208ENST00000623007 PLSCR4Q9NRQ2 329 aa14.16□□□□□ -0.14
LDB3-208ENST00000623007 LHX6Q9UPM6 363 aa14.16□□□□□ -0.14
LDB3-208ENST00000623007 NPTNQ9Y639 398 aa14.16□□□□□ -0.14
LDB3-208ENST00000623007 ARHGAP21Q5T5U3 1957 aa14.16□□□□□ -0.14
LDB3-208ENST00000623007 FAM230AA0A1W2PPH8 454 aa14.15□□□□□ -0.14
LDB3-208ENST00000623007 FIGNL2A6NMB9 653 aa14.15□□□□□ -0.14
LDB3-208ENST00000623007 FOXI3A8MTJ6 420 aaPredicted RBP14.15□□□□□ -0.14
LDB3-208ENST00000623007 SELEP16581 610 aa14.15□□□□□ -0.14
LDB3-208ENST00000623007 CCNOP22674 350 aa14.15□□□□□ -0.14
LDB3-208ENST00000623007 BLVRBP30043 206 aaPredicted RBP14.15□□□□□ -0.14
LDB3-208ENST00000623007 PDZK1IP1Q13113 114 aa14.15□□□□□ -0.14
LDB3-208ENST00000623007 P2RY6Q15077 328 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms