RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 CTBSQ01459 385 aa6.49□□□□□ -1.37
COLCA1-205ENST00000620864 GRAMD2BQ96HH9 432 aa6.49□□□□□ -1.37
COLCA1-205ENST00000620864 MRPS2Q9Y399 296 aaKnown RBP6.49□□□□□ -1.37
COLCA1-205ENST00000620864 TIMM10BQ9Y5J6 103 aa6.49□□□□□ -1.37
COLCA1-205ENST00000620864 R4GMQ9 66 aa6.49□□□□□ -1.37
COLCA1-205ENST00000620864 INHBBP09529 407 aa6.49□□□□□ -1.37
COLCA1-205ENST00000620864 JOSD1Q15040 202 aaPredicted RBP6.49□□□□□ -1.37
COLCA1-205ENST00000620864 LEXMQ3ZCV2 418 aa6.49□□□□□ -1.37
COLCA1-205ENST00000620864 DTD2Q96FN9 168 aa6.49□□□□□ -1.37
COLCA1-205ENST00000620864 RCL1Q9Y2P8 373 aaKnown RBP6.49□□□□□ -1.37
COLCA1-205ENST00000620864 SNED1Q8TER0 1413 aa6.49□□□□□ -1.37
COLCA1-205ENST00000620864 A0A1B0GWA3 101 aa6.49□□□□□ -1.37
COLCA1-205ENST00000620864 A0A1W2PNV4 684 aa6.49□□□□□ -1.37
COLCA1-205ENST00000620864 ZNF737O75373 536 aa6.49□□□□□ -1.37
COLCA1-205ENST00000620864 PIAS2O75928 621 aa6.49□□□□□ -1.37
COLCA1-205ENST00000620864 YBX1P67809 324 aaKnown RBP6.49□□□□□ -1.37
COLCA1-205ENST00000620864 GPNMBQ14956 572 aa6.49□□□□□ -1.37
COLCA1-205ENST00000620864 LGALSLQ3ZCW2 172 aaPredicted RBP6.49□□□□□ -1.37
COLCA1-205ENST00000620864 C15orf39Q6ZRI6 1047 aa6.49□□□□□ -1.37
COLCA1-205ENST00000620864 PP6455Q8WZ26 134 aa6.49□□□□□ -1.37
COLCA1-205ENST00000620864 TRMT61AQ96FX7 289 aaKnown RBP6.49□□□□□ -1.37
COLCA1-205ENST00000620864 OR6C1Q96RD1 312 aa6.49□□□□□ -1.37
COLCA1-205ENST00000620864 KCNK17Q96T54 332 aa6.49□□□□□ -1.37
COLCA1-205ENST00000620864 TMEM147Q9BVK8 224 aa6.49□□□□□ -1.37
COLCA1-205ENST00000620864 HES4Q9HCC6 221 aa6.49□□□□□ -1.37
COLCA1-205ENST00000620864 SNRPNP63162 240 aaKnown RBP6.48□□□□□ -1.37
COLCA1-205ENST00000620864 IL24Q13007 206 aa6.48□□□□□ -1.37
COLCA1-205ENST00000620864 ACKR1Q16570 336 aa6.48□□□□□ -1.37
COLCA1-205ENST00000620864 DUSP5Q16690 384 aa6.48□□□□□ -1.37
COLCA1-205ENST00000620864 CLEC14AQ86T13 490 aa6.48□□□□□ -1.37
COLCA1-205ENST00000620864 TTC9BQ8N6N2 239 aa6.48□□□□□ -1.37
COLCA1-205ENST00000620864 OR8B4Q96RC9 309 aa6.48□□□□□ -1.37
COLCA1-205ENST00000620864 TNFRSF19Q9NS68 423 aa6.48□□□□□ -1.37
COLCA1-205ENST00000620864 CYSLTR2Q9NS75 346 aa6.48□□□□□ -1.37
COLCA1-205ENST00000620864 LINC00862A6NCI5 91 aa6.48□□□□□ -1.37
COLCA1-205ENST00000620864 RBFOX3A6NFN3 312 aa6.48□□□□□ -1.37
COLCA1-205ENST00000620864 H3BVH4 76 aa6.48□□□□□ -1.37
COLCA1-205ENST00000620864 EDDM3BP56851 147 aa6.48□□□□□ -1.37
COLCA1-205ENST00000620864 PPP2CBP62714 309 aa6.48□□□□□ -1.37
COLCA1-205ENST00000620864 SURF2Q15527 256 aaPredicted RBP6.48□□□□□ -1.37
COLCA1-205ENST00000620864 ANKRD55Q3KP44 614 aa6.48□□□□□ -1.37
COLCA1-205ENST00000620864 VASH2Q86V25 355 aa6.48□□□□□ -1.37
COLCA1-205ENST00000620864 OR52N4Q8NGI2 321 aa6.48□□□□□ -1.37
COLCA1-205ENST00000620864 GPR61Q9BZJ8 451 aa6.48□□□□□ -1.37
COLCA1-205ENST00000620864 DOK5Q9P104 306 aa6.48□□□□□ -1.37
COLCA1-205ENST00000620864 YBX2Q9Y2T7 364 aaKnown RBP6.48□□□□□ -1.37
COLCA1-205ENST00000620864 ZNF98A6NK75 572 aa6.48□□□□□ -1.37
COLCA1-205ENST00000620864 FAM72CH0Y354 149 aa6.48□□□□□ -1.37
COLCA1-205ENST00000620864 J3KTA2 159 aa6.48□□□□□ -1.37
COLCA1-205ENST00000620864 UTS2O95399 124 aa6.48□□□□□ -1.37
COLCA1-205ENST00000620864 PRSS1P07477 247 aa6.48□□□□□ -1.37
COLCA1-205ENST00000620864 OR5AC1P0C628 307 aa6.48□□□□□ -1.37
COLCA1-205ENST00000620864 CD68P34810 354 aaPredicted RBP6.48□□□□□ -1.37
COLCA1-205ENST00000620864 OR8G1Q15617 311 aa6.48□□□□□ -1.37
COLCA1-205ENST00000620864 OR1C1Q15619 314 aa6.48□□□□□ -1.37
COLCA1-205ENST00000620864 TMEM176BQ3YBM2 270 aaPredicted RBP6.48□□□□□ -1.37
COLCA1-205ENST00000620864 FAM72AQ5TYM5 149 aa6.48□□□□□ -1.37
COLCA1-205ENST00000620864 FAM72DQ6L9T8 149 aa6.48□□□□□ -1.37
COLCA1-205ENST00000620864 FAM72BQ86X60 149 aa6.48□□□□□ -1.37
COLCA1-205ENST00000620864 PELI3Q8N2H9 469 aa6.48□□□□□ -1.37
COLCA1-205ENST00000620864 MYOZ3Q8TDC0 251 aa6.48□□□□□ -1.37
COLCA1-205ENST00000620864 C11orf40Q8WZ69 217 aa6.48□□□□□ -1.37
COLCA1-205ENST00000620864 TMEM230Q96A57 120 aa6.48□□□□□ -1.37
COLCA1-205ENST00000620864 RAB37Q96AX2 223 aa6.48□□□□□ -1.37
COLCA1-205ENST00000620864 PARD6GQ9BYG4 376 aaPredicted RBP6.48□□□□□ -1.37
COLCA1-205ENST00000620864 PARP12Q9H0J9 701 aaKnown RBP6.48□□□□□ -1.37
COLCA1-205ENST00000620864 MED20Q9H944 212 aa6.48□□□□□ -1.37
COLCA1-205ENST00000620864 UQCR10Q9UDW1 63 aa6.48□□□□□ -1.37
COLCA1-205ENST00000620864 MFNGO00587 321 aa6.48□□□□□ -1.37
COLCA1-205ENST00000620864 GYPAP02724 150 aa6.48□□□□□ -1.37
COLCA1-205ENST00000620864 NPY5RQ15761 445 aa6.48□□□□□ -1.37
COLCA1-205ENST00000620864 SSX1Q16384 188 aa6.48□□□□□ -1.37
COLCA1-205ENST00000620864 BSXQ3C1V8 233 aa6.48□□□□□ -1.37
COLCA1-205ENST00000620864 TMEM81Q6P7N7 255 aa6.48□□□□□ -1.37
COLCA1-205ENST00000620864 OR5D18Q8NGL1 313 aa6.48□□□□□ -1.37
COLCA1-205ENST00000620864 PELI1Q96FA3 418 aa6.48□□□□□ -1.37
COLCA1-205ENST00000620864 TAS2R4Q9NYW5 299 aa6.48□□□□□ -1.37
COLCA1-205ENST00000620864 C5AR2Q9P296 337 aa6.48□□□□□ -1.37
COLCA1-205ENST00000620864 HSFX1Q9UBD0 423 aa6.48□□□□□ -1.37
COLCA1-205ENST00000620864 WASHC3Q9Y3C0 194 aa6.48□□□□□ -1.37
COLCA1-205ENST00000620864 C3orf80F5H4A9 247 aa6.48□□□□□ -1.37
COLCA1-205ENST00000620864 C1orf140Q5VVS0 124 aa6.48□□□□□ -1.37
COLCA1-205ENST00000620864 BVESQ8NE79 360 aa6.48□□□□□ -1.37
COLCA1-205ENST00000620864 MRPS24Q96EL2 167 aaKnown RBP6.48□□□□□ -1.37
COLCA1-205ENST00000620864 PIK3IP1Q96FE7 263 aa6.48□□□□□ -1.37
COLCA1-205ENST00000620864 CALHM2Q9HA72 323 aa6.48□□□□□ -1.37
COLCA1-205ENST00000620864 SH2D2AQ9NP31 389 aa6.48□□□□□ -1.37
COLCA1-205ENST00000620864 ATP23Q9Y6H3 246 aa6.48□□□□□ -1.37
COLCA1-205ENST00000620864 FGF9P31371 208 aaPredicted RBP6.48□□□□□ -1.37
COLCA1-205ENST00000620864 YPEL5P62699 121 aa6.48□□□□□ -1.37
COLCA1-205ENST00000620864 SMIM21Q3B7S5 101 aa6.48□□□□□ -1.37
COLCA1-205ENST00000620864 ZNF468Q5VIY5 522 aaPredicted RBP6.48□□□□□ -1.37
COLCA1-205ENST00000620864 PRSS54Q6PEW0 395 aa6.48□□□□□ -1.37
COLCA1-205ENST00000620864 ZNF813Q6ZN06 617 aa6.48□□□□□ -1.37
COLCA1-205ENST00000620864 CMTM4Q8IZR5 234 aa6.48□□□□□ -1.37
COLCA1-205ENST00000620864 FAM24BQ8N5W8 94 aa6.48□□□□□ -1.37
COLCA1-205ENST00000620864 STXBP6Q8NFX7 210 aa6.48□□□□□ -1.37
COLCA1-205ENST00000620864 OR10G8Q8NGN5 311 aa6.48□□□□□ -1.37
COLCA1-205ENST00000620864 ADAMTS17Q8TE56 1095 aa6.48□□□□□ -1.37
COLCA1-205ENST00000620864 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms