RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 TMEM163Q8TC26 289 aa14.17□□□□□ -0.14
HMGN3-203ENST00000620514 ASB17Q8WXJ9 295 aa14.17□□□□□ -0.14
HMGN3-203ENST00000620514 LHX4Q969G2 390 aa14.17□□□□□ -0.14
HMGN3-203ENST00000620514 C12orf43Q96C57 262 aaKnown RBP14.17□□□□□ -0.14
HMGN3-203ENST00000620514 DUS3LQ96G46 650 aaKnown RBP14.17□□□□□ -0.14
HMGN3-203ENST00000620514 RAB3IPQ96QF0 476 aaPredicted RBP14.17□□□□□ -0.14
HMGN3-203ENST00000620514 HIST1H2AAQ96QV6 131 aa14.17□□□□□ -0.14
HMGN3-203ENST00000620514 IL4I1Q96RQ9 567 aa14.17□□□□□ -0.14
HMGN3-203ENST00000620514 APOL4Q9BPW4 351 aa14.17□□□□□ -0.14
HMGN3-203ENST00000620514 PRRG3Q9BZD7 231 aa14.17□□□□□ -0.14
HMGN3-203ENST00000620514 PRDM13Q9H4Q3 707 aa14.17□□□□□ -0.14
HMGN3-203ENST00000620514 CNTD2Q9H8S5 307 aa14.17□□□□□ -0.14
HMGN3-203ENST00000620514 ADGRL4Q9HBW9 690 aa14.17□□□□□ -0.14
HMGN3-203ENST00000620514 GPR84Q9NQS5 396 aa14.17□□□□□ -0.14
HMGN3-203ENST00000620514 TNFRSF19Q9NS68 423 aa14.17□□□□□ -0.14
HMGN3-203ENST00000620514 DNAJB11Q9UBS4 358 aa14.17□□□□□ -0.14
HMGN3-203ENST00000620514 TMEM14AQ9Y6G1 99 aa14.17□□□□□ -0.14
HMGN3-203ENST00000620514 ZNF732B4DXR9 585 aa14.16□□□□□ -0.14
HMGN3-203ENST00000620514 SRSF10O75494 262 aaKnown RBP14.16□□□□□ -0.14
HMGN3-203ENST00000620514 RHBDL1O75783 438 aa14.16□□□□□ -0.14
HMGN3-203ENST00000620514 ATP5HO75947 161 aa14.16□□□□□ -0.14
HMGN3-203ENST00000620514 POLR2IP36954 125 aaKnown RBP14.16□□□□□ -0.14
HMGN3-203ENST00000620514 TGM4P49221 684 aa14.16□□□□□ -0.14
HMGN3-203ENST00000620514 CXCR4P61073 352 aa14.16□□□□□ -0.14
HMGN3-203ENST00000620514 NXNL2Q5VZ03 156 aa14.16□□□□□ -0.14
HMGN3-203ENST00000620514 ZNF322Q6U7Q0 402 aaPredicted RBP14.16□□□□□ -0.14
HMGN3-203ENST00000620514 PLEKHG7Q6ZR37 379 aa14.16□□□□□ -0.14
HMGN3-203ENST00000620514 SLC36A1Q7Z2H8 476 aa14.16□□□□□ -0.14
HMGN3-203ENST00000620514 ZDHHC13Q8IUH4 622 aa14.16□□□□□ -0.14
HMGN3-203ENST00000620514 PDZD9Q8IXQ8 264 aa14.16□□□□□ -0.14
HMGN3-203ENST00000620514 SLC35F2Q8IXU6 374 aa14.16□□□□□ -0.14
HMGN3-203ENST00000620514 CIB1Q99828 191 aa14.16□□□□□ -0.14
HMGN3-203ENST00000620514 SEMA6AQ9H2E6 1030 aa14.16□□□□□ -0.14
HMGN3-203ENST00000620514 H2AFY2Q9P0M6 372 aaPredicted RBP14.16□□□□□ -0.14
HMGN3-203ENST00000620514 NUFIP1Q9UHK0 495 aaKnown RBP14.16□□□□□ -0.14
HMGN3-203ENST00000620514 IGHV1-69DA0A0B4J2H0 117 aa14.15□□□□□ -0.14
HMGN3-203ENST00000620514 NDUFB3O43676 98 aa14.15□□□□□ -0.14
HMGN3-203ENST00000620514 IGHV1-69P01742 117 aa14.15□□□□□ -0.14
HMGN3-203ENST00000620514 TTRP02766 147 aa14.15□□□□□ -0.14
HMGN3-203ENST00000620514 FAHP16930 419 aa14.15□□□□□ -0.14
HMGN3-203ENST00000620514 BPIFB3P59826 476 aa14.15□□□□□ -0.14
HMGN3-203ENST00000620514 PRB3Q04118 309 aaPredicted RBP14.15□□□□□ -0.14
HMGN3-203ENST00000620514 C11orf91Q3C1V1 193 aa14.15□□□□□ -0.14
HMGN3-203ENST00000620514 ZNF829Q3KNS6 432 aaPredicted RBP14.15□□□□□ -0.14
HMGN3-203ENST00000620514 CEACAM21Q3KPI0 293 aa14.15□□□□□ -0.14
HMGN3-203ENST00000620514 ATPAF1Q5TC12 328 aaPredicted RBP14.15□□□□□ -0.14
HMGN3-203ENST00000620514 C16orf87Q6PH81 154 aa14.15□□□□□ -0.14
HMGN3-203ENST00000620514 Q6YL49 198 aa14.15□□□□□ -0.14
HMGN3-203ENST00000620514 MOB3CQ70IA8 216 aa14.15□□□□□ -0.14
HMGN3-203ENST00000620514 THAP5Q7Z6K1 395 aa14.15□□□□□ -0.14
HMGN3-203ENST00000620514 LY6G5BQ8NDX9 201 aa14.15□□□□□ -0.14
HMGN3-203ENST00000620514 GATAD2BQ8WXI9 593 aa14.15□□□□□ -0.14
HMGN3-203ENST00000620514 GAFA1Q96PS6 74 aa14.15□□□□□ -0.14
HMGN3-203ENST00000620514 ZNF747Q9BV97 191 aa14.15□□□□□ -0.14
HMGN3-203ENST00000620514 OR51I2Q9H344 312 aa14.15□□□□□ -0.14
HMGN3-203ENST00000620514 ONECUT1Q9UBC0 465 aa14.15□□□□□ -0.14
HMGN3-203ENST00000620514 GTF2A1LQ9UNN4 478 aa14.15□□□□□ -0.14
HMGN3-203ENST00000620514 PIGLQ9Y2B2 252 aa14.15□□□□□ -0.14
HMGN3-203ENST00000620514 SLC22A31A6NKX4 558 aa14.14□□□□□ -0.15
HMGN3-203ENST00000620514 MELTFP08582 738 aa14.14□□□□□ -0.15
HMGN3-203ENST00000620514 ATP6V1B1P15313 513 aa14.14□□□□□ -0.15
HMGN3-203ENST00000620514 OMGP23515 440 aa14.14□□□□□ -0.15
HMGN3-203ENST00000620514 GNG3P63215 75 aa14.14□□□□□ -0.15
HMGN3-203ENST00000620514 RIPPLY1Q0D2K3 151 aa14.14□□□□□ -0.15
HMGN3-203ENST00000620514 PDCD1Q15116 288 aa14.14□□□□□ -0.15
HMGN3-203ENST00000620514 DGUOKQ16854 277 aa14.14□□□□□ -0.15
HMGN3-203ENST00000620514 CDONQ4KMG0 1287 aa14.14□□□□□ -0.15
HMGN3-203ENST00000620514 ZNF788Q6ZQV5 615 aa14.14□□□□□ -0.15
HMGN3-203ENST00000620514 SSX6Q7RTT6 188 aa14.14□□□□□ -0.15
HMGN3-203ENST00000620514 VMO1Q7Z5L0 202 aa14.14□□□□□ -0.15
HMGN3-203ENST00000620514 OR51G2Q8NGK0 314 aa14.14□□□□□ -0.15
HMGN3-203ENST00000620514 ANGPTL6Q8NI99 470 aa14.14□□□□□ -0.15
HMGN3-203ENST00000620514 DCTN5Q9BTE1 182 aa14.14□□□□□ -0.15
HMGN3-203ENST00000620514 UNKLQ9H9P5 680 aaKnown RBP14.14□□□□□ -0.15
HMGN3-203ENST00000620514 NOX4Q9NPH5 578 aa14.14□□□□□ -0.15
HMGN3-203ENST00000620514 CLN6Q9NWW5 311 aa14.14□□□□□ -0.15
HMGN3-203ENST00000620514 NLKQ9UBE8 527 aa14.14□□□□□ -0.15
HMGN3-203ENST00000620514 MRM2Q9UI43 246 aaKnown RBP14.14□□□□□ -0.15
HMGN3-203ENST00000620514 NKX6-3A6NJ46 265 aa14.13□□□□□ -0.15
HMGN3-203ENST00000620514 SAC3D1A6NKF1 404 aa14.13□□□□□ -0.15
HMGN3-203ENST00000620514 ZNF670-ZNF695F2Z2N8 137 aa14.13□□□□□ -0.15
HMGN3-203ENST00000620514 LOC110117498-PIK3R3F6TDL0 507 aa14.13□□□□□ -0.15
HMGN3-203ENST00000620514 FCGR1AP12314 374 aa14.13□□□□□ -0.15
HMGN3-203ENST00000620514 GLRA1P23415 457 aa14.13□□□□□ -0.15
HMGN3-203ENST00000620514 DLX1P56177 255 aa14.13□□□□□ -0.15
HMGN3-203ENST00000620514 LRRC10Q5BKY1 277 aa14.13□□□□□ -0.15
HMGN3-203ENST00000620514 PLCXD3Q63HM9 321 aa14.13□□□□□ -0.15
HMGN3-203ENST00000620514 GID4Q8IVV7 300 aa14.13□□□□□ -0.15
HMGN3-203ENST00000620514 OR5A2Q8NGI9 324 aa14.13□□□□□ -0.15
HMGN3-203ENST00000620514 AQP3Q92482 292 aa14.13□□□□□ -0.15
HMGN3-203ENST00000620514 H1FXQ92522 213 aaKnown RBP14.13□□□□□ -0.15
HMGN3-203ENST00000620514 MNTQ99583 582 aa14.13□□□□□ -0.15
HMGN3-203ENST00000620514 TBX5Q99593 518 aa14.13□□□□□ -0.15
HMGN3-203ENST00000620514 RIBC2Q9H4K1 309 aa14.13□□□□□ -0.15
HMGN3-203ENST00000620514 SIRT7Q9NRC8 400 aa14.13□□□□□ -0.15
HMGN3-203ENST00000620514 ACOXLQ9NUZ1 547 aa14.13□□□□□ -0.15
HMGN3-203ENST00000620514 ENPP5Q9UJA9 477 aa14.13□□□□□ -0.15
HMGN3-203ENST00000620514 OR52A1Q9UKL2 312 aa14.13□□□□□ -0.15
HMGN3-203ENST00000620514 OAZ3Q9UMX2 235 aa14.13□□□□□ -0.15
HMGN3-203ENST00000620514 KPTNQ9Y664 436 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms