RNA–Protein interactions for RNA: ENST00000619644.4

SMTN-223, Transcript of smoothelin, human

TSL 2 BASIC

Gene SMTN, Length 3,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMTN-223	ENST00000619644	APOBEC1	P41238	236 aa	Known RBP	12.77	□□□□□ -0.36
SMTN-223	ENST00000619644	GUCA1A	P43080	201 aa	Predicted RBP	12.77	□□□□□ -0.36
SMTN-223	ENST00000619644	GABRE	P78334	506 aa		12.77	□□□□□ -0.36
SMTN-223	ENST00000619644	AWAT1	Q58HT5	328 aa		12.77	□□□□□ -0.36
SMTN-223	ENST00000619644	C9orf152	Q5JTZ5	239 aa		12.77	□□□□□ -0.36
SMTN-223	ENST00000619644	LCN10	Q6JVE6	187 aa		12.77	□□□□□ -0.36
SMTN-223	ENST00000619644	CLEC18B	Q6UXF7	455 aa		12.77	□□□□□ -0.36
SMTN-223	ENST00000619644	WDSUB1	Q8N9V3	476 aa		12.77	□□□□□ -0.36
SMTN-223	ENST00000619644	RHBDD3	Q9Y3P4	386 aa		12.77	□□□□□ -0.36
SMTN-223	ENST00000619644	TIMM10B	Q9Y5J6	103 aa		12.77	□□□□□ -0.36
SMTN-223	ENST00000619644	ZNF43	P17038	809 aa		12.77	□□□□□ -0.37
SMTN-223	ENST00000619644	TMEM176B	Q3YBM2	270 aa	Predicted RBP	12.77	□□□□□ -0.37
SMTN-223	ENST00000619644	OR2B11	Q5JQS5	317 aa		12.77	□□□□□ -0.37
SMTN-223	ENST00000619644	RPL7L1	Q6DKI1	246 aa	Known RBP	12.77	□□□□□ -0.37
SMTN-223	ENST00000619644	PRSS54	Q6PEW0	395 aa		12.77	□□□□□ -0.37
SMTN-223	ENST00000619644	OR10G3	Q8NGC4	313 aa		12.77	□□□□□ -0.37
SMTN-223	ENST00000619644	LHFPL6	Q9Y693	200 aa		12.77	□□□□□ -0.37
SMTN-223	ENST00000619644	FER1L5	A0AVI2	2057 aa		12.77	□□□□□ -0.37
SMTN-223	ENST00000619644	TNFSF12-TNFSF13	A0A0A6YY99	330 aa		12.77	□□□□□ -0.37
SMTN-223	ENST00000619644	LOC390937	A0A1W2PQ73	354 aa		12.77	□□□□□ -0.37
SMTN-223	ENST00000619644	LIPT2	A6NK58	231 aa		12.77	□□□□□ -0.37
SMTN-223	ENST00000619644	RAMP1	O60894	148 aa		12.77	□□□□□ -0.37
SMTN-223	ENST00000619644	RAD51D	O75771	328 aa		12.77	□□□□□ -0.37
SMTN-223	ENST00000619644	ZNF205	O95201	554 aa		12.77	□□□□□ -0.37
SMTN-223	ENST00000619644	IGHG1	P01857	330 aa		12.77	□□□□□ -0.37
SMTN-223	ENST00000619644	IGHM	P01871	453 aa		12.77	□□□□□ -0.37
SMTN-223	ENST00000619644	QDPR	P09417	244 aa		12.77	□□□□□ -0.37
SMTN-223	ENST00000619644	GLI4	P10075	376 aa		12.77	□□□□□ -0.37
SMTN-223	ENST00000619644	DAO	P14920	347 aa		12.77	□□□□□ -0.37
SMTN-223	ENST00000619644	TMEM128	Q5BJH2	165 aa		12.77	□□□□□ -0.37
SMTN-223	ENST00000619644	BTNL8	Q6UX41	500 aa		12.77	□□□□□ -0.37
SMTN-223	ENST00000619644	OIT3	Q8WWZ8	545 aa		12.77	□□□□□ -0.37
SMTN-223	ENST00000619644	ST8SIA1	Q92185	356 aa		12.77	□□□□□ -0.37
SMTN-223	ENST00000619644	SLC39A7	Q92504	469 aa		12.77	□□□□□ -0.37
SMTN-223	ENST00000619644	PGAM5	Q96HS1	289 aa		12.77	□□□□□ -0.37
SMTN-223	ENST00000619644	IP6K3	Q96PC2	410 aa		12.77	□□□□□ -0.37
SMTN-223	ENST00000619644	C5orf66	Q9H5L9	145 aa		12.77	□□□□□ -0.37
SMTN-223	ENST00000619644	TAF9B	Q9HBM6	251 aa		12.77	□□□□□ -0.37
SMTN-223	ENST00000619644	GPR27	Q9NS67	375 aa		12.77	□□□□□ -0.37
SMTN-223	ENST00000619644	CDC14B	O60729	498 aa		12.76	□□□□□ -0.37
SMTN-223	ENST00000619644	OR2J2	O76002	312 aa		12.76	□□□□□ -0.37
SMTN-223	ENST00000619644	ADH6	P28332	368 aa		12.76	□□□□□ -0.37
SMTN-223	ENST00000619644	BLVRB	P30043	206 aa	Predicted RBP	12.76	□□□□□ -0.37
SMTN-223	ENST00000619644	DVL1P1	P54792	670 aa	Predicted RBP	12.76	□□□□□ -0.37
SMTN-223	ENST00000619644	STARD6	P59095	220 aa		12.76	□□□□□ -0.37
SMTN-223	ENST00000619644	DEGS2	Q6QHC5	323 aa		12.76	□□□□□ -0.37
SMTN-223	ENST00000619644	SLC38A9	Q8NBW4	561 aa		12.76	□□□□□ -0.37
SMTN-223	ENST00000619644	KCNG3	Q8TAE7	436 aa		12.76	□□□□□ -0.37
SMTN-223	ENST00000619644	JSRP1	Q96MG2	331 aa	Predicted RBP	12.76	□□□□□ -0.37
SMTN-223	ENST00000619644	AQP10	Q96PS8	301 aa		12.76	□□□□□ -0.37
SMTN-223	ENST00000619644	WDR77	Q9BQA1	342 aa	Predicted RBP	12.76	□□□□□ -0.37
SMTN-223	ENST00000619644	SLC5A7	Q9GZV3	580 aa		12.76	□□□□□ -0.37
SMTN-223	ENST00000619644	KPTN	Q9Y664	436 aa		12.76	□□□□□ -0.37
SMTN-223	ENST00000619644	STMND1	H3BQB6	276 aa		12.76	□□□□□ -0.37
SMTN-223	ENST00000619644	EFNA2	O43921	213 aa		12.76	□□□□□ -0.37
SMTN-223	ENST00000619644	HIST1H1D	P16402	221 aa	Known RBP	12.76	□□□□□ -0.37
SMTN-223	ENST00000619644	RAB5A	P20339	215 aa		12.76	□□□□□ -0.37
SMTN-223	ENST00000619644	GABRR1	P24046	479 aa		12.76	□□□□□ -0.37
SMTN-223	ENST00000619644	SNU13	P55769	128 aa	Known RBP	12.76	□□□□□ -0.37
SMTN-223	ENST00000619644	OR2B8P	P59922	312 aa		12.76	□□□□□ -0.37
SMTN-223	ENST00000619644	RAB32	Q13637	225 aa		12.76	□□□□□ -0.37
SMTN-223	ENST00000619644	PIGT	Q969N2	578 aa		12.76	□□□□□ -0.37
SMTN-223	ENST00000619644	PTX4	Q96A99	478 aa		12.76	□□□□□ -0.37
SMTN-223	ENST00000619644	OCSTAMP	Q9BR26	566 aa		12.76	□□□□□ -0.37
SMTN-223	ENST00000619644	C20orf24	Q9BUV8	137 aa		12.76	□□□□□ -0.37
SMTN-223	ENST00000619644	CELSR3	Q9NYQ7	3312 aa		12.75	□□□□□ -0.37
SMTN-223	ENST00000619644	C7orf77	A4D0Y5	90 aa		12.75	□□□□□ -0.37
SMTN-223	ENST00000619644	C5orf63	A6NC05	138 aa		12.75	□□□□□ -0.37
SMTN-223	ENST00000619644	SHISA7	A6NL88	538 aa		12.75	□□□□□ -0.37
SMTN-223	ENST00000619644	ZNF729	A6NN14	1252 aa	Predicted RBP	12.75	□□□□□ -0.37
SMTN-223	ENST00000619644		G3V3Y1	287 aa		12.75	□□□□□ -0.37
SMTN-223	ENST00000619644	OR8U9	P0C7N5	309 aa		12.75	□□□□□ -0.37
SMTN-223	ENST00000619644	GLP1R	P43220	463 aa		12.75	□□□□□ -0.37
SMTN-223	ENST00000619644	COL19A1	Q14993	1142 aa		12.75	□□□□□ -0.37
SMTN-223	ENST00000619644	NCMAP	Q5T1S8	102 aa		12.75	□□□□□ -0.37
SMTN-223	ENST00000619644	OR8U1	Q8NH10	309 aa		12.75	□□□□□ -0.37
SMTN-223	ENST00000619644	URM1	Q9BTM9	101 aa	Known RBP	12.75	□□□□□ -0.37
SMTN-223	ENST00000619644	B3GALT5	Q9Y2C3	310 aa		12.75	□□□□□ -0.37
SMTN-223	ENST00000619644	IGHV3-15	A0A0B4J1V0	119 aa		12.75	□□□□□ -0.37
SMTN-223	ENST00000619644	ZNF814	B7Z6K7	855 aa		12.75	□□□□□ -0.37
SMTN-223	ENST00000619644	AP4M1	O00189	453 aa		12.75	□□□□□ -0.37
SMTN-223	ENST00000619644	TMEM50B	P56557	158 aa		12.75	□□□□□ -0.37
SMTN-223	ENST00000619644	TAS2R31	P59538	309 aa		12.75	□□□□□ -0.37
SMTN-223	ENST00000619644	RAB30	Q15771	203 aa		12.75	□□□□□ -0.37
SMTN-223	ENST00000619644	CHRFAM7A	Q494W8	412 aa		12.75	□□□□□ -0.37
SMTN-223	ENST00000619644	ADAM5	Q6NVV9	412 aa		12.75	□□□□□ -0.37
SMTN-223	ENST00000619644		Q6ZRG5	221 aa		12.75	□□□□□ -0.37
SMTN-223	ENST00000619644	SYT13	Q7L8C5	426 aa		12.75	□□□□□ -0.37
SMTN-223	ENST00000619644	HOGA1	Q86XE5	327 aa		12.75	□□□□□ -0.37
SMTN-223	ENST00000619644	PNLDC1	Q8NA58	520 aa	Known RBP	12.75	□□□□□ -0.37
SMTN-223	ENST00000619644	DTWD2	Q8NBA8	298 aa		12.75	□□□□□ -0.37
SMTN-223	ENST00000619644	APCDD1L	Q8NCL9	501 aa		12.75	□□□□□ -0.37
SMTN-223	ENST00000619644	OR10C1	Q96KK4	312 aa		12.75	□□□□□ -0.37
SMTN-223	ENST00000619644	OR6C1	Q96RD1	312 aa		12.75	□□□□□ -0.37
SMTN-223	ENST00000619644	PFDN5	Q99471	154 aa		12.75	□□□□□ -0.37
SMTN-223	ENST00000619644	TMPRSS5	Q9H3S3	457 aa		12.75	□□□□□ -0.37
SMTN-223	ENST00000619644	ALKBH4	Q9NXW9	302 aa		12.75	□□□□□ -0.37
SMTN-223	ENST00000619644	FLVCR1	Q9Y5Y0	555 aa		12.75	□□□□□ -0.37
SMTN-223	ENST00000619644		A0A1W2PR77	199 aa		12.75	□□□□□ -0.37
SMTN-223	ENST00000619644		M0R036	132 aa		12.75	□□□□□ -0.37

Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms