RNA–Protein interactions for RNA: ENST00000618327.4

CIITA-213, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CIITA, Length 4,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-213ENST00000618327 FUT6P51993 359 aa12.31□□□□□ -0.44
CIITA-213ENST00000618327 OR8B8Q15620 311 aa12.31□□□□□ -0.44
CIITA-213ENST00000618327 OR1J1Q8NGS3 322 aa12.31□□□□□ -0.44
CIITA-213ENST00000618327 FGF11Q92914 225 aa12.31□□□□□ -0.44
CIITA-213ENST00000618327 NIPSNAP3BQ9BS92 247 aa12.31□□□□□ -0.44
CIITA-213ENST00000618327 OCEL1Q9H607 264 aa12.31□□□□□ -0.44
CIITA-213ENST00000618327 NECAP2Q9NVZ3 263 aa12.31□□□□□ -0.44
CIITA-213ENST00000618327 GNG12Q9UBI6 72 aa12.31□□□□□ -0.44
CIITA-213ENST00000618327 NEUROG3Q9Y4Z2 214 aa12.31□□□□□ -0.44
CIITA-213ENST00000618327 THADAQ6YHU6 1953 aa12.31□□□□□ -0.44
CIITA-213ENST00000618327 XRCC3O43542 346 aa12.31□□□□□ -0.44
CIITA-213ENST00000618327 SCGB2A1O75556 95 aa12.31□□□□□ -0.44
CIITA-213ENST00000618327 IL11P20809 199 aa12.31□□□□□ -0.44
CIITA-213ENST00000618327 OMGP23515 440 aa12.31□□□□□ -0.44
CIITA-213ENST00000618327 CLDN20P56880 219 aa12.31□□□□□ -0.44
CIITA-213ENST00000618327 LTC4SQ16873 150 aa12.31□□□□□ -0.44
CIITA-213ENST00000618327 LSRQ86X29 649 aaPredicted RBP12.31□□□□□ -0.44
CIITA-213ENST00000618327 GABRG1Q8N1C3 465 aa12.31□□□□□ -0.44
CIITA-213ENST00000618327 OR2AE1Q8NHA4 323 aa12.31□□□□□ -0.44
CIITA-213ENST00000618327 FBLIM1Q8WUP2 373 aa12.31□□□□□ -0.44
CIITA-213ENST00000618327 ZNF275Q9NSD4 429 aaPredicted RBP12.31□□□□□ -0.44
CIITA-213ENST00000618327 NPY4RP50391 375 aa12.31□□□□□ -0.44
CIITA-213ENST00000618327 NDUFA6P56556 154 aa12.31□□□□□ -0.44
CIITA-213ENST00000618327 ZNF439Q8NDP4 499 aa12.31□□□□□ -0.44
CIITA-213ENST00000618327 SPSB1Q96BD6 273 aa12.31□□□□□ -0.44
CIITA-213ENST00000618327 GPX7Q96SL4 187 aaPredicted RBP12.31□□□□□ -0.44
CIITA-213ENST00000618327 AUNIPQ9H7T9 357 aa12.31□□□□□ -0.44
CIITA-213ENST00000618327 FRRS1LQ9P0K9 344 aa12.31□□□□□ -0.44
CIITA-213ENST00000618327 A0A1W2PR80 420 aa12.3□□□□□ -0.44
CIITA-213ENST00000618327 GDF9O60383 454 aa12.3□□□□□ -0.44
CIITA-213ENST00000618327 AGFG1P52594 562 aaKnown RBP12.3□□□□□ -0.44
CIITA-213ENST00000618327 CFHR1Q03591 330 aa12.3□□□□□ -0.44
CIITA-213ENST00000618327 PPP1R32Q7Z5V6 425 aa12.3□□□□□ -0.44
CIITA-213ENST00000618327 SLC26A10Q8NG04 563 aa12.3□□□□□ -0.44
CIITA-213ENST00000618327 SMIM4Q8WVI0 70 aa12.3□□□□□ -0.44
CIITA-213ENST00000618327 RAB39BQ96DA2 213 aa12.3□□□□□ -0.44
CIITA-213ENST00000618327 PIGMQ9H3S5 423 aa12.3□□□□□ -0.44
CIITA-213ENST00000618327 ATP23Q9Y6H3 246 aa12.3□□□□□ -0.44
CIITA-213ENST00000618327 SDK2Q58EX2 2172 aa12.3□□□□□ -0.44
CIITA-213ENST00000618327 LRRC30A6NM36 301 aa12.3□□□□□ -0.44
CIITA-213ENST00000618327 LPCAT3Q6P1A2 487 aa12.3□□□□□ -0.44
CIITA-213ENST00000618327 CMTM3Q96MX0 182 aa12.3□□□□□ -0.44
CIITA-213ENST00000618327 TECTBQ96PL2 329 aa12.3□□□□□ -0.44
CIITA-213ENST00000618327 ZNF385AQ96PM9 386 aaKnown RBP12.3□□□□□ -0.44
CIITA-213ENST00000618327 SEC22CQ9BRL7 303 aa12.3□□□□□ -0.44
CIITA-213ENST00000618327 GLRX2Q9NS18 164 aa12.3□□□□□ -0.44
CIITA-213ENST00000618327 SDHAF2Q9NX18 166 aa12.3□□□□□ -0.44
CIITA-213ENST00000618327 TXNDC12O95881 172 aa12.3□□□□□ -0.44
CIITA-213ENST00000618327 ACSM4P0C7M7 580 aa12.3□□□□□ -0.44
CIITA-213ENST00000618327 PDLIM3Q53GG5 364 aaPredicted RBP12.3□□□□□ -0.44
CIITA-213ENST00000618327 ST8SIA4Q92187 359 aa12.3□□□□□ -0.44
CIITA-213ENST00000618327 WDFY2Q96P53 400 aa12.3□□□□□ -0.44
CIITA-213ENST00000618327 EGLN1Q9GZT9 426 aa12.3□□□□□ -0.44
CIITA-213ENST00000618327 PI4KAP42356 2102 aa12.3□□□□□ -0.44
CIITA-213ENST00000618327 KIR2DS1A0A191URI9 304 aa12.29□□□□□ -0.44
CIITA-213ENST00000618327 PRSS44E7EML9 344 aa12.29□□□□□ -0.44
CIITA-213ENST00000618327 LYZL6O75951 148 aa12.29□□□□□ -0.44
CIITA-213ENST00000618327 KIR2DS4P43632 304 aa12.29□□□□□ -0.44
CIITA-213ENST00000618327 PDZK1IP1Q13113 114 aa12.29□□□□□ -0.44
CIITA-213ENST00000618327 KIR2DS1Q14954 304 aa12.29□□□□□ -0.44
CIITA-213ENST00000618327 NKX3-1Q99801 234 aaPredicted RBP12.29□□□□□ -0.44
CIITA-213ENST00000618327 ZNF732B4DXR9 585 aa12.29□□□□□ -0.44
CIITA-213ENST00000618327 NPIPB9F8W1W9 429 aa12.29□□□□□ -0.44
CIITA-213ENST00000618327 EDDM3BP56851 147 aa12.29□□□□□ -0.44
CIITA-213ENST00000618327 CST9LP1Q5W188 147 aa12.29□□□□□ -0.44
CIITA-213ENST00000618327 MAMSTRQ6ZN01 415 aa12.29□□□□□ -0.44
CIITA-213ENST00000618327 ARHGEF39Q8N4T4 335 aa12.29□□□□□ -0.44
CIITA-213ENST00000618327 BTF3L4Q96K17 158 aa12.29□□□□□ -0.44
CIITA-213ENST00000618327 ST3GAL6Q9Y274 331 aa12.29□□□□□ -0.44
CIITA-213ENST00000618327 IGKV1D-42A0A075B6H8 117 aa12.29□□□□□ -0.44
CIITA-213ENST00000618327 ANGPTL7O43827 346 aa12.29□□□□□ -0.44
CIITA-213ENST00000618327 MMP15P51511 669 aa12.29□□□□□ -0.44
CIITA-213ENST00000618327 CAMK2BQ13554 666 aa12.29□□□□□ -0.44
CIITA-213ENST00000618327 KIAA0141Q14154 515 aaPredicted RBP12.29□□□□□ -0.44
CIITA-213ENST00000618327 TFAP2EQ6VUC0 442 aa12.29□□□□□ -0.44
CIITA-213ENST00000618327 BTLAQ7Z6A9 289 aa12.29□□□□□ -0.44
CIITA-213ENST00000618327 HSD17B11Q8NBQ5 300 aa12.29□□□□□ -0.44
CIITA-213ENST00000618327 RDH5Q92781 318 aa12.29□□□□□ -0.44
CIITA-213ENST00000618327 HRASLSQ9HDD0 168 aa12.29□□□□□ -0.44
CIITA-213ENST00000618327 C1orf123Q9NWV4 160 aa12.29□□□□□ -0.44
CIITA-213ENST00000618327 APC2O95996 2303 aa12.29□□□□□ -0.44
CIITA-213ENST00000618327 OR4C45A6NMZ5 311 aa12.29□□□□□ -0.44
CIITA-213ENST00000618327 SPRY1O43609 319 aaPredicted RBP12.29□□□□□ -0.44
CIITA-213ENST00000618327 GABRA1P14867 456 aa12.29□□□□□ -0.44
CIITA-213ENST00000618327 BMP5P22003 454 aa12.29□□□□□ -0.44
CIITA-213ENST00000618327 GGTLC2Q14390 218 aa12.29□□□□□ -0.44
CIITA-213ENST00000618327 RBMS3Q6XE24 437 aaKnown RBP12.29□□□□□ -0.44
CIITA-213ENST00000618327 ZNF705AQ6ZN79 300 aaPredicted RBP12.29□□□□□ -0.44
CIITA-213ENST00000618327 OR10Z1Q8NGY1 313 aa12.29□□□□□ -0.44
CIITA-213ENST00000618327 KLK11Q9UBX7 282 aa12.29□□□□□ -0.44
CIITA-213ENST00000618327 NDRG3Q9UGV2 375 aa12.29□□□□□ -0.44
CIITA-213ENST00000618327 IGLV3-12A0A075B6K2 115 aa12.28□□□□□ -0.44
CIITA-213ENST00000618327 C17orf51A8MQB3 221 aa12.28□□□□□ -0.44
CIITA-213ENST00000618327 IGF2P01344 180 aa12.28□□□□□ -0.44
CIITA-213ENST00000618327 RPP30P78346 268 aaKnown RBP12.28□□□□□ -0.44
CIITA-213ENST00000618327 TLE4Q04727 773 aa12.28□□□□□ -0.44
CIITA-213ENST00000618327 EDDM3AQ14507 147 aa12.28□□□□□ -0.44
CIITA-213ENST00000618327 KISS1Q15726 138 aa12.28□□□□□ -0.44
CIITA-213ENST00000618327 TMEM251Q8N6I4 163 aa12.28□□□□□ -0.44
CIITA-213ENST00000618327 OR8B12Q8NGG6 310 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms